RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 NDUFB5O43674 189 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 SELENOFO60613 162 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 RPL4P36578 427 aaKnown RBP13.17□□□□□ -0.3
CCDC43-203ENST00000588210 SNTB2Q13425 540 aaKnown RBP13.17□□□□□ -0.3
CCDC43-203ENST00000588210 FAM69AQ5T7M9 428 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 TIGD4Q8IY51 512 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 CMTM4Q8IZR5 234 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 ZNF527Q8NB42 609 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 NFAM1Q8NET5 270 aaPredicted RBP13.17□□□□□ -0.3
CCDC43-203ENST00000588210 OR11H4Q8NGC9 324 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 OR8H1Q8NGG4 311 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 RIT1Q92963 219 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 NMNAT3Q96T66 252 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 GFI1Q99684 422 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 SMAD5Q99717 465 aaKnown RBP13.17□□□□□ -0.3
CCDC43-203ENST00000588210 PDCD1LG2Q9BQ51 273 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 G6PC3Q9BUM1 346 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 NUDT9Q9BW91 350 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 ZNF552Q9H707 407 aaPredicted RBP13.17□□□□□ -0.3
CCDC43-203ENST00000588210 NOX4Q9NPH5 578 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 DTX4Q9Y2E6 619 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 CACNA1GO43497 2377 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 NBEAQ8NFP9 2946 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 OR6C68A6NDL8 312 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 AIPO00170 330 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 GNB5O14775 395 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 PIN1P1O15428 100 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 OR7A10O76100 309 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 RAF1P04049 648 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 SRMP19623 302 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 GALNSP34059 522 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 PSMB10P40306 273 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 LY6DQ14210 128 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 TEX261Q6UWH6 196 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 PRSS45Q7RTY3 260 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 ZPLD1Q8TCW7 415 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 ELP5Q8TE02 316 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 PTPMT1Q8WUK0 201 aaPredicted RBP13.17□□□□□ -0.3
CCDC43-203ENST00000588210 DERL3Q96Q80 235 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 SLC19A3Q9BZV2 496 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 SLC25A18Q9H1K4 315 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 C20orf85Q9H1P6 137 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 Q9N2J8 555 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 ANKRD10Q9NXR5 420 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 NPTNQ9Y639 398 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 U3KQ87 197 aa13.17□□□□□ -0.3
CCDC43-203ENST00000588210 C17orf105B2RV13 164 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 PRAMEF2O60811 474 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 TSC22D2O75157 780 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 ITGA10O75578 1167 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 GLCEO94923 617 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 CELA2AP08217 269 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 ESCO2Q56NI9 601 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 IZUMO1Q8IYV9 350 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 PSMF1Q92530 271 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 SLC25A38Q96DW6 304 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 MED30Q96HR3 178 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 ZNF281Q9Y2X9 895 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 LINC00862A6NCI5 91 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 NAP1L6A6NFF2 107 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 SERINC4A6NH21 518 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 IFITM5A6NNB3 132 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 LEUTXA8MZ59 168 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 GABARAPH6UMI1 98 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 HRKO00198 91 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 PEX14O75381 377 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 SLC22A5O76082 557 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 ECDO95905 644 aaPredicted RBP13.16□□□□□ -0.3
CCDC43-203ENST00000588210 CSTAP01040 98 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 DPP4P27487 766 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 PGDP52209 483 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 PRPS1P60891 318 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 CAMK2DQ13557 499 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 NDUFAF6Q330K2 333 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 ELFN2Q5R3F8 820 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 ZNF684Q5T5D7 378 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 LINC01590Q5TEZ4 76 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 LINGO2Q7L985 606 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 APCDD1LQ8NCL9 501 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 OR6K6Q8NGW6 343 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 C3orf49Q96BT1 292 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 RASD2Q96D21 266 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 MRI1Q9BV20 369 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 HEXA-AS1Q9H8Q6 139 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 SCP2D1Q9UJQ7 156 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 TP53TG5Q9Y2B4 290 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 AUP1Q9Y679 476 aa13.16□□□□□ -0.3
CCDC43-203ENST00000588210 DOCK10Q96BY6 2186 aa13.15□□□□□ -0.3
CCDC43-203ENST00000588210 ACOD1A6NK06 481 aa13.15□□□□□ -0.3
CCDC43-203ENST00000588210 IMPA2O14732 288 aa13.15□□□□□ -0.3
CCDC43-203ENST00000588210 PRAF2O60831 178 aa13.15□□□□□ -0.3
CCDC43-203ENST00000588210 IGF2P01344 180 aa13.15□□□□□ -0.3
CCDC43-203ENST00000588210 CT45A8P0DMV1 189 aa13.15□□□□□ -0.3
CCDC43-203ENST00000588210 CT45A9P0DMV2 189 aa13.15□□□□□ -0.3
CCDC43-203ENST00000588210 CCR9P51686 369 aa13.15□□□□□ -0.3
CCDC43-203ENST00000588210 ARPC4P59998 168 aa13.15□□□□□ -0.3
CCDC43-203ENST00000588210 CT45A2Q5DJT8 189 aa13.15□□□□□ -0.3
CCDC43-203ENST00000588210 HES5Q5TA89 166 aa13.15□□□□□ -0.3
CCDC43-203ENST00000588210 SLC6A19Q695T7 634 aa13.15□□□□□ -0.3
CCDC43-203ENST00000588210 H3F3CQ6NXT2 135 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms