RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 TIGARQ9NQ88 270 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 QPCTLQ9NXS2 382 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 KLHL13Q9P2N7 655 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 LAMP5Q9UJQ1 280 aa9.28□□□□□ -0.92
LIG3-203ENST00000585370 PNMA8CA0A1B0GUJ8 204 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 A0A1W2PNR3 127 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 LRRC3CA6NJW4 275 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 G3V3Y1 287 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 DCTN6O00399 190 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 ZNF593O00488 134 aaPredicted RBP9.27□□□□□ -0.93
LIG3-203ENST00000585370 GABRPO00591 440 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 GATBO75879 557 aaKnown RBP9.27□□□□□ -0.93
LIG3-203ENST00000585370 NEURL1O76050 574 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 ZNF432O94892 652 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 WDPCPO95876 746 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 HLA-DQA2P01906 255 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 HPNP05981 417 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 HLA-DOBP13765 273 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 ZNF823P16415 610 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 CFL1P23528 166 aaKnown RBP9.27□□□□□ -0.93
LIG3-203ENST00000585370 GDF1P27539 372 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 PTGS2P35354 604 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 RPS19P39019 145 aaKnown RBP9.27□□□□□ -0.93
LIG3-203ENST00000585370 MTNR1BP49286 362 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 ENTPD1P49961 510 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 BIDP55957 195 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 B3GALT5-AS1P59052 145 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 GPR85P60893 370 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 FABP5Q01469 135 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 FOXO1Q12778 655 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 MFAP5Q13361 173 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 HYAL4Q2M3T9 481 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 SLC18B1Q6NT16 456 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 TRILQ7L0X0 811 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 GHDCQ8N2G8 530 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 FAM83FQ8NEG4 500 aaPredicted RBP9.27□□□□□ -0.93
LIG3-203ENST00000585370 OR2M7Q8NG81 312 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 OR5M1Q8NGP8 315 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 OR6N2Q8NGY6 317 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 OTOSQ8NHW6 89 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 ABHD4Q8TB40 342 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 AP3S1Q92572 193 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 THRSPQ92748 146 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 TMEM203Q969S6 136 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 SLC25A46Q96AG3 418 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 SMIM19Q96E16 107 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 PELI1Q96FA3 418 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 TM9SF2Q99805 663 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 TTYH2Q9BSA4 534 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 CDADC1Q9BWV3 514 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 MFRPQ9BY79 579 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 MRPL13Q9BYD1 178 aaKnown RBP9.27□□□□□ -0.93
LIG3-203ENST00000585370 RERGLQ9H628 205 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 ANKRD10Q9NXR5 420 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 GALNT8Q9NY28 637 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 B3GAT1Q9P2W7 334 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 KCNG2Q9UJ96 466 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 GNG8Q9UK08 70 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 ITPR2Q14571 2701 aa9.27□□□□□ -0.93
LIG3-203ENST00000585370 ESPL1Q14674 2120 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 CRYBG3Q68DQ2 2970 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 TRBV2A0A0J9YWF9 115 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 IQCMA0A1B0GVH7 501 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 OR5H15A6NDH6 313 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 FAM171A2A8MVW0 826 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 H7C1C5 153 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 TRAF3IP2O43734 574 aaPredicted RBP9.26□□□□□ -0.93
LIG3-203ENST00000585370 TMEM127O75204 238 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 ZNF254O75437 659 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 TRAPPC6AO75865 159 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 AQP8O94778 261 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 CDRT1O95170 752 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 SP1P08047 785 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 CTLA4P16410 223 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 EDNRAP25101 427 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 UQCRFS1P47985 274 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 CCL11P51671 97 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 HCCSP53701 268 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 CARD18P57730 90 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 CLRN1P58418 232 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 LCN6P62502 163 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 ZNF45Q02386 682 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 ROM1Q03395 351 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 MELKQ14680 651 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 CDK5R1Q15078 307 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 PCK2Q16822 640 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 TP53I3Q53FA7 332 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 C22orf42Q6IC83 251 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 SPINK14Q6IE38 97 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 FDX2Q6P4F2 183 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 DEGS2Q6QHC5 323 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 ARL9Q6T311 187 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 SSX6Q7RTT6 188 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 GLB1L2Q8IW92 636 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 KDM8Q8N371 416 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 YIPF7Q8N8F6 280 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 ZFP41Q8N8Y5 198 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 RPS4Y2Q8TD47 263 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 GHSRQ92847 366 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 PNPLA2Q96AD5 504 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms