RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 LRR1Q96L50 414 aa15.28■□□□□ 0.04
TOP3A-220ENST00000585031 CCDC115Q96NT0 180 aa15.28■□□□□ 0.04
TOP3A-220ENST00000585031 FOXB1Q99853 325 aa15.28■□□□□ 0.04
TOP3A-220ENST00000585031 CITED1Q99966 193 aa15.28■□□□□ 0.04
TOP3A-220ENST00000585031 SLC6A13Q9NSD5 602 aa15.28■□□□□ 0.04
TOP3A-220ENST00000585031 AP3M1Q9Y2T2 418 aa15.28■□□□□ 0.04
TOP3A-220ENST00000585031 AUP1Q9Y679 476 aa15.28■□□□□ 0.04
TOP3A-220ENST00000585031 A0A1B0GUS0 222 aa15.27■□□□□ 0.04
TOP3A-220ENST00000585031 GPANK1O95872 356 aa15.27■□□□□ 0.04
TOP3A-220ENST00000585031 OR8G3PP0DMU2 310 aa15.27■□□□□ 0.04
TOP3A-220ENST00000585031 IGHV4-38-2P0DP08 117 aa15.27■□□□□ 0.04
TOP3A-220ENST00000585031 MVDP53602 400 aa15.27■□□□□ 0.04
TOP3A-220ENST00000585031 RELBQ01201 579 aa15.27■□□□□ 0.04
TOP3A-220ENST00000585031 TEKQ02763 1124 aa15.27■□□□□ 0.04
TOP3A-220ENST00000585031 TRAP1Q12931 704 aaKnown RBP15.27■□□□□ 0.04
TOP3A-220ENST00000585031 FLOT2Q14254 428 aa15.27■□□□□ 0.04
TOP3A-220ENST00000585031 HFEQ30201 348 aa15.27■□□□□ 0.04
TOP3A-220ENST00000585031 RPS26P11Q5JNZ5 115 aaPredicted RBP15.27■□□□□ 0.04
TOP3A-220ENST00000585031 SPATC1Q76KD6 591 aa15.27■□□□□ 0.04
TOP3A-220ENST00000585031 SAP30LQ9HAJ7 183 aa15.27■□□□□ 0.04
TOP3A-220ENST00000585031 ABCD2Q9UBJ2 740 aa15.27■□□□□ 0.04
TOP3A-220ENST00000585031 UBL3O95164 117 aa15.26■□□□□ 0.03
TOP3A-220ENST00000585031 ZNF12P17014 697 aa15.26■□□□□ 0.03
TOP3A-220ENST00000585031 RCN1Q15293 331 aa15.26■□□□□ 0.03
TOP3A-220ENST00000585031 LIN52Q52LA3 116 aa15.26■□□□□ 0.03
TOP3A-220ENST00000585031 RNF220Q5VTB9 566 aa15.26■□□□□ 0.03
TOP3A-220ENST00000585031 C16orf87Q6PH81 154 aa15.26■□□□□ 0.03
TOP3A-220ENST00000585031 ASB9Q96DX5 294 aa15.26■□□□□ 0.03
TOP3A-220ENST00000585031 ITCHQ96J02 903 aa15.26■□□□□ 0.03
TOP3A-220ENST00000585031 TRIM15Q9C019 465 aa15.26■□□□□ 0.03
TOP3A-220ENST00000585031 MUC13Q9H3R2 512 aa15.26■□□□□ 0.03
TOP3A-220ENST00000585031 DECR2Q9NUI1 292 aa15.26■□□□□ 0.03
TOP3A-220ENST00000585031 INSIG2Q9Y5U4 225 aa15.26■□□□□ 0.03
TOP3A-220ENST00000585031 DOCK11Q5JSL3 2073 aa15.26■□□□□ 0.03
TOP3A-220ENST00000585031 ISPDA4D126 451 aa15.25■□□□□ 0.03
TOP3A-220ENST00000585031 M0QZ24 198 aa15.25■□□□□ 0.03
TOP3A-220ENST00000585031 FXYD1O00168 92 aa15.25■□□□□ 0.03
TOP3A-220ENST00000585031 TPD52L2O43399 206 aaKnown RBP15.25■□□□□ 0.03
TOP3A-220ENST00000585031 KRT36O76013 467 aa15.25■□□□□ 0.03
TOP3A-220ENST00000585031 KNG1P01042 644 aa15.25■□□□□ 0.03
TOP3A-220ENST00000585031 IGHV1-46P01743 117 aa15.25■□□□□ 0.03
TOP3A-220ENST00000585031 LCKP06239 509 aa15.25■□□□□ 0.03
TOP3A-220ENST00000585031 GTF2E2P29084 291 aaKnown RBP15.25■□□□□ 0.03
TOP3A-220ENST00000585031 TRIM25Q14258 630 aaKnown RBP15.25■□□□□ 0.03
TOP3A-220ENST00000585031 PAGE3Q5JUK9 113 aa15.25■□□□□ 0.03
TOP3A-220ENST00000585031 FAM69AQ5T7M9 428 aa15.25■□□□□ 0.03
TOP3A-220ENST00000585031 ASPHD2Q6ICH7 369 aa15.25■□□□□ 0.03
TOP3A-220ENST00000585031 SLC2A7Q6PXP3 512 aa15.25■□□□□ 0.03
TOP3A-220ENST00000585031 UEVLDQ8IX04 471 aa15.25■□□□□ 0.03
TOP3A-220ENST00000585031 SLC30A7Q8NEW0 376 aa15.25■□□□□ 0.03
TOP3A-220ENST00000585031 ZNF519Q8TB69 540 aa15.25■□□□□ 0.03
TOP3A-220ENST00000585031 SNX33Q8WV41 574 aa15.25■□□□□ 0.03
TOP3A-220ENST00000585031 SLC41A3Q96GZ6 507 aa15.25■□□□□ 0.03
TOP3A-220ENST00000585031 TIMD4Q96H15 378 aa15.25■□□□□ 0.03
TOP3A-220ENST00000585031 OR52E6Q96RD3 313 aa15.25■□□□□ 0.03
TOP3A-220ENST00000585031 SH3GL1Q99961 368 aa15.25■□□□□ 0.03
TOP3A-220ENST00000585031 SH3GL3Q99963 347 aa15.25■□□□□ 0.03
TOP3A-220ENST00000585031 ULBP2Q9BZM5 246 aa15.25■□□□□ 0.03
TOP3A-220ENST00000585031 SLCO1C1Q9NYB5 712 aa15.25■□□□□ 0.03
TOP3A-220ENST00000585031 TESQ9UGI8 421 aaKnown RBP15.25■□□□□ 0.03
TOP3A-220ENST00000585031 BTNL2Q9UIR0 455 aa15.25■□□□□ 0.03
TOP3A-220ENST00000585031 POLR3KQ9Y2Y1 108 aaPredicted RBP15.25■□□□□ 0.03
TOP3A-220ENST00000585031 DNAH3Q8TD57 4116 aa15.25■□□□□ 0.03
TOP3A-220ENST00000585031 FAM181BA6NEQ2 426 aa15.24■□□□□ 0.03
TOP3A-220ENST00000585031 LRRN3E7EW58 273 aa15.24■□□□□ 0.03
TOP3A-220ENST00000585031 SPRY3O43610 288 aa15.24■□□□□ 0.03
TOP3A-220ENST00000585031 FOXH1O75593 365 aa15.24■□□□□ 0.03
TOP3A-220ENST00000585031 ETFAP13804 333 aa15.24■□□□□ 0.03
TOP3A-220ENST00000585031 HSD17B1P14061 328 aa15.24■□□□□ 0.03
TOP3A-220ENST00000585031 SLC6A2P23975 617 aa15.24■□□□□ 0.03
TOP3A-220ENST00000585031 UCP2P55851 309 aa15.24■□□□□ 0.03
TOP3A-220ENST00000585031 RBBP4Q09028 425 aa15.24■□□□□ 0.03
TOP3A-220ENST00000585031 LRRC74AQ0VAA2 488 aa15.24■□□□□ 0.03
TOP3A-220ENST00000585031 C6orf10Q5SRN2 563 aa15.24■□□□□ 0.03
TOP3A-220ENST00000585031 ZFP1Q6P2D0 407 aa15.24■□□□□ 0.03
TOP3A-220ENST00000585031 COMTD1Q86VU5 262 aa15.24■□□□□ 0.03
TOP3A-220ENST00000585031 VPS37AQ8NEZ2 397 aa15.24■□□□□ 0.03
TOP3A-220ENST00000585031 OR8J3Q8NGG0 315 aa15.24■□□□□ 0.03
TOP3A-220ENST00000585031 ST7LQ8TDW4 575 aa15.24■□□□□ 0.03
TOP3A-220ENST00000585031 SLC26A7Q8TE54 656 aa15.24■□□□□ 0.03
TOP3A-220ENST00000585031 SLC38A5Q8WUX1 472 aa15.24■□□□□ 0.03
TOP3A-220ENST00000585031 ELMOD3Q96FG2 381 aa15.24■□□□□ 0.03
TOP3A-220ENST00000585031 CGREF1Q99674 301 aa15.24■□□□□ 0.03
TOP3A-220ENST00000585031 RBM4BQ9BQ04 359 aaKnown RBP15.24■□□□□ 0.03
TOP3A-220ENST00000585031 SPATA9Q9BWV2 254 aa15.24■□□□□ 0.03
TOP3A-220ENST00000585031 STX18Q9P2W9 335 aaKnown RBP15.24■□□□□ 0.03
TOP3A-220ENST00000585031 CD300AQ9UGN4 299 aa15.24■□□□□ 0.03
TOP3A-220ENST00000585031 EGFL7Q9UHF1 273 aa15.24■□□□□ 0.03
TOP3A-220ENST00000585031 GPR160Q9UJ42 338 aa15.24■□□□□ 0.03
TOP3A-220ENST00000585031 A0A087WUJ7 227 aa15.23■□□□□ 0.03
TOP3A-220ENST00000585031 SLC22A23A1A5C7 686 aa15.23■□□□□ 0.03
TOP3A-220ENST00000585031 ZSCAN5BA6NJL1 495 aa15.23■□□□□ 0.03
TOP3A-220ENST00000585031 NME4O00746 187 aa15.23■□□□□ 0.03
TOP3A-220ENST00000585031 TIMM23O14925 209 aa15.23■□□□□ 0.03
TOP3A-220ENST00000585031 AKAP8O43823 692 aaKnown RBP15.23■□□□□ 0.03
TOP3A-220ENST00000585031 IGHV3-13P01766 116 aa15.23■□□□□ 0.03
TOP3A-220ENST00000585031 IGHV2-70P01814 119 aa15.23■□□□□ 0.03
TOP3A-220ENST00000585031 IGHMP01871 453 aa15.23■□□□□ 0.03
TOP3A-220ENST00000585031 BGLAPP02818 100 aa15.23■□□□□ 0.03
TOP3A-220ENST00000585031 BCHEP06276 602 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms