RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 KIR2DS1Q14954 304 aa12□□□□□ -0.49
RNF43-208ENST00000584437 FAHD1Q6P587 224 aa12□□□□□ -0.49
RNF43-208ENST00000584437 RHOUQ7L0Q8 258 aa12□□□□□ -0.49
RNF43-208ENST00000584437 BAP18Q8IXM2 172 aa12□□□□□ -0.49
RNF43-208ENST00000584437 C19orf47Q8N9M1 422 aaKnown RBP12□□□□□ -0.49
RNF43-208ENST00000584437 FAM174AQ8TBP5 190 aa12□□□□□ -0.49
RNF43-208ENST00000584437 CDCA3Q99618 268 aaPredicted RBP12□□□□□ -0.49
RNF43-208ENST00000584437 SPATA6Q9NWH7 488 aaPredicted RBP12□□□□□ -0.49
RNF43-208ENST00000584437 HIF1ANQ9NWT6 349 aa12□□□□□ -0.49
RNF43-208ENST00000584437 GNG12Q9UBI6 72 aa12□□□□□ -0.49
RNF43-208ENST00000584437 BOKQ9UMX3 212 aaPredicted RBP12□□□□□ -0.49
RNF43-208ENST00000584437 MYH13Q9UKX3 1938 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 KDM3BQ7LBC6 1761 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 ZNF587BE7ETH6 402 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 HOXC11O43248 304 aaPredicted RBP11.99□□□□□ -0.49
RNF43-208ENST00000584437 OPN1LWP04000 364 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 CT45A6P0DMU7 189 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 CT45A5P0DMU8 189 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 CT45A7P0DMV0 189 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 CT45A8P0DMV1 189 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 CT45A9P0DMV2 189 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 CT45A2Q5DJT8 189 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 CT45A1Q5HYN5 189 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 MED25Q71SY5 747 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 VRK3Q8IV63 474 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 TMEM99Q8N816 258 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 CLRN3Q8NCR9 226 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 OR51A2Q8NGJ7 313 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 CT45A3Q8NHU0 189 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 ARHGAP9Q9BRR9 750 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 TPSD1Q9BZJ3 242 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 PRELID3BQ9Y3B1 194 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 MMACHCQ9Y4U1 282 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 DOC2BQ14184 412 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 STK11Q15831 433 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 MORN1Q5T089 497 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 ZBTB37Q5TC79 503 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 LINC00346Q8IVM7 164 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 SEMA6DQ8NFY4 1073 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 BCO1Q9HAY6 547 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 TAAR2Q9P1P5 351 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 PRAMEF4O60810 478 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 TUSC2O75896 110 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 CEBPBP17676 345 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 CSNK1G2P78368 415 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 SMAD2Q15796 467 aaKnown RBP11.99□□□□□ -0.49
RNF43-208ENST00000584437 DEFB133Q30KQ1 61 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 FAM3CQ92520 227 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 Q96M85 177 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 OR51B6Q9H340 312 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 HINT3Q9NQE9 182 aaKnown RBP11.99□□□□□ -0.49
RNF43-208ENST00000584437 ACOXLQ9NUZ1 547 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 AK3Q9UIJ7 227 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 CTXN2P0C2S0 81 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 EIF1P41567 113 aaKnown RBP11.99□□□□□ -0.49
RNF43-208ENST00000584437 TNFRSF4P43489 277 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 SSBP1Q04837 148 aaKnown RBP11.99□□□□□ -0.49
RNF43-208ENST00000584437 ERV3-1Q14264 604 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 PHLDA2Q53GA4 152 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 ACSM5Q6NUN0 579 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 TMEM182Q6ZP80 229 aaPredicted RBP11.99□□□□□ -0.49
RNF43-208ENST00000584437 DOK3Q7L591 496 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 NKAIN4Q8IVV8 208 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 RBMXL3Q8N7X1 1067 aaKnown RBP11.99□□□□□ -0.49
RNF43-208ENST00000584437 SLC16A11Q8NCK7 471 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 OR2AK2Q8NG84 335 aa11.99□□□□□ -0.49
RNF43-208ENST00000584437 ZNF331Q9NQX6 463 aaPredicted RBP11.99□□□□□ -0.49
RNF43-208ENST00000584437 FITM1A5D6W6 292 aa11.98□□□□□ -0.49
RNF43-208ENST00000584437 NID1P14543 1247 aa11.98□□□□□ -0.49
RNF43-208ENST00000584437 FABP6P51161 128 aa11.98□□□□□ -0.49
RNF43-208ENST00000584437 EMC4Q5J8M3 183 aa11.98□□□□□ -0.49
RNF43-208ENST00000584437 LDLRAD1Q5T700 205 aa11.98□□□□□ -0.49
RNF43-208ENST00000584437 Q6ZRG5 221 aa11.98□□□□□ -0.49
RNF43-208ENST00000584437 SHISA6Q6ZSJ9 500 aa11.98□□□□□ -0.49
RNF43-208ENST00000584437 DCXRQ7Z4W1 244 aa11.98□□□□□ -0.49
RNF43-208ENST00000584437 GJC3Q8NFK1 279 aa11.98□□□□□ -0.49
RNF43-208ENST00000584437 HSD17B8Q92506 261 aa11.98□□□□□ -0.49
RNF43-208ENST00000584437 UCN3Q969E3 161 aa11.98□□□□□ -0.49
RNF43-208ENST00000584437 ULBP3Q9BZM4 244 aa11.98□□□□□ -0.49
RNF43-208ENST00000584437 CGGBP1Q9UFW8 167 aaPredicted RBP11.98□□□□□ -0.49
RNF43-208ENST00000584437 TRAPPC4Q9Y296 219 aa11.98□□□□□ -0.49
RNF43-208ENST00000584437 OR6C68A6NDL8 312 aa11.98□□□□□ -0.49
RNF43-208ENST00000584437 SELENBP1Q13228 472 aa11.98□□□□□ -0.49
RNF43-208ENST00000584437 AQP6Q13520 282 aa11.98□□□□□ -0.49
RNF43-208ENST00000584437 C2orf76Q3KRA6 126 aa11.98□□□□□ -0.49
RNF43-208ENST00000584437 CLLU1Q5K131 121 aa11.98□□□□□ -0.49
RNF43-208ENST00000584437 HCFC1R1Q9NWW0 138 aa11.98□□□□□ -0.49
RNF43-208ENST00000584437 SLC25A37Q9NYZ2 338 aa11.98□□□□□ -0.49
RNF43-208ENST00000584437 A0A1B0GTW7 788 aa11.98□□□□□ -0.49
RNF43-208ENST00000584437 ZBTB42B2RXF5 422 aa11.98□□□□□ -0.49
RNF43-208ENST00000584437 PLPP1O14494 284 aa11.98□□□□□ -0.49
RNF43-208ENST00000584437 CTNSO60931 367 aa11.98□□□□□ -0.49
RNF43-208ENST00000584437 GLSO94925 669 aaPredicted RBP11.98□□□□□ -0.49
RNF43-208ENST00000584437 PDGFBP01127 241 aaPredicted RBP11.98□□□□□ -0.49
RNF43-208ENST00000584437 RPL27P61353 136 aaKnown RBP11.98□□□□□ -0.49
RNF43-208ENST00000584437 SLC39A5Q6ZMH5 540 aa11.98□□□□□ -0.49
RNF43-208ENST00000584437 RBM45Q8IUH3 476 aaKnown RBP11.98□□□□□ -0.49
RNF43-208ENST00000584437 PBX4Q9BYU1 374 aa11.98□□□□□ -0.49
RNF43-208ENST00000584437 FGF20Q9NP95 211 aaPredicted RBP11.98□□□□□ -0.49
RNF43-208ENST00000584437 AKR7A2O43488 359 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms