RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 C10orf128Q5T292 105 aa11.71□□□□□ -0.53
CDK5RAP3-233ENST00000584186 RGS7BPQ6MZT1 257 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP3-233ENST00000584186 RRM2BQ7LG56 351 aa11.71□□□□□ -0.53
CDK5RAP3-233ENST00000584186 CPLX4Q7Z7G2 160 aa11.71□□□□□ -0.53
CDK5RAP3-233ENST00000584186 ZNF786Q8N393 782 aa11.71□□□□□ -0.53
CDK5RAP3-233ENST00000584186 RNF148Q8N7C7 305 aa11.71□□□□□ -0.53
CDK5RAP3-233ENST00000584186 OR1J2Q8NGS2 313 aa11.71□□□□□ -0.53
CDK5RAP3-233ENST00000584186 ACOT11Q8WXI4 607 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP3-233ENST00000584186 TSPAN32Q96QS1 320 aa11.71□□□□□ -0.53
CDK5RAP3-233ENST00000584186 RBP7Q96R05 134 aa11.71□□□□□ -0.53
CDK5RAP3-233ENST00000584186 BEX2Q9BXY8 128 aa11.71□□□□□ -0.53
CDK5RAP3-233ENST00000584186 LRMDAQ9H2I8 198 aa11.71□□□□□ -0.53
CDK5RAP3-233ENST00000584186 MS4A5Q9H3V2 200 aa11.71□□□□□ -0.53
CDK5RAP3-233ENST00000584186 C1orf198Q9H425 327 aa11.71□□□□□ -0.53
CDK5RAP3-233ENST00000584186 SIAEQ9HAT2 523 aa11.71□□□□□ -0.53
CDK5RAP3-233ENST00000584186 ADA2Q9NZK5 511 aa11.71□□□□□ -0.53
CDK5RAP3-233ENST00000584186 CDC42EP3Q9UKI2 254 aa11.71□□□□□ -0.53
CDK5RAP3-233ENST00000584186 UGT2A1Q9Y4X1 527 aa11.71□□□□□ -0.53
CDK5RAP3-233ENST00000584186 A0A087WUU8 490 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 A0A1W2PPL8 197 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 SLC22A23A1A5C7 686 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 NPIPB13A6NJU9 1138 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 NPIPB4C9JG80 1138 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 ATP8B1O43520 1251 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 LMX1BO60663 402 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 GMNNO75496 209 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 CLPTM1O96005 669 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 IFNA2P01563 188 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 MMP7P09237 267 aaPredicted RBP11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 NR2C1P13056 603 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 ZNF23P17027 643 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 APLNRP35414 380 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 RPL4P36578 427 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 GUCA1AP43080 201 aaPredicted RBP11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 ZNF133P52736 654 aaPredicted RBP11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 SELENOVP59797 346 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 ERVS71-1P61550 626 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 ERVK-25P63136 954 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 TAF11Q15544 211 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 THEM4Q5T1C6 240 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 FAM166AQ6J272 317 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 MBOAT2Q6ZWT7 520 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 RNF113BQ8IZP6 322 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 ARIH2OSQ8N7S6 290 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 AKR7LQ8NHP1 331 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 NMD3Q96D46 503 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 MSI2Q96DH6 328 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 SNX18Q96RF0 628 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 ALG12Q9BV10 488 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 SHARPINQ9H0F6 387 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 NSRP1Q9H0G5 558 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 MYLK2Q9H1R3 596 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 NMNAT1Q9HAN9 279 aaPredicted RBP11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 SMURF2Q9HAU4 748 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 SPAG4Q9NPE6 437 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 ABCD2Q9UBJ2 740 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 RPS6KA6Q9UK32 745 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 KCNS2Q9ULS6 477 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 FAM32AQ9Y421 112 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 ENPP4Q9Y6X5 453 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 CUBNO60494 3623 aa11.7□□□□□ -0.54
CDK5RAP3-233ENST00000584186 GMNCA6NCL1 334 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 A6NIZ1 184 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 H7C1C5 153 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 CDC42EP2O14613 210 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 PRSS23O95084 383 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 TGFAP01135 160 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 IGHMP01871 453 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 ZNF32P17041 273 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 STOMP27105 288 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 GIFP27352 417 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 LAP3P28838 519 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 RAD52P43351 418 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 CHN2P52757 468 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 UCP2P55851 309 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 KLF3P57682 345 aaPredicted RBP11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 RAP1BP61224 184 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 LCN6P62502 163 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 RAP1AP62834 184 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 FGD3Q5JSP0 725 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 FAM205BPQ63HN1 556 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 GLYATQ6IB77 296 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 SLC25A47Q6Q0C1 308 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 IL17RELQ6ZVW7 336 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 LRRC75AQ8NAA5 344 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 FAM156AQ8NDB6 213 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 CPEB3Q8NE35 698 aaKnown RBP11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 SYNPRQ8TBG9 265 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 C11orf40Q8WZ69 217 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 NABP1Q96AH0 204 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 FAM46AQ96IP4 442 aaKnown RBP11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 TAAR3PQ9P1P4 343 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 GRHPRQ9UBQ7 328 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 V9GYQ6 96 aa11.69□□□□□ -0.54
CDK5RAP3-233ENST00000584186 C5orf49A4QMS7 147 aa11.68□□□□□ -0.54
CDK5RAP3-233ENST00000584186 XKRYO14609 159 aa11.68□□□□□ -0.54
CDK5RAP3-233ENST00000584186 MGRN1O60291 552 aa11.68□□□□□ -0.54
CDK5RAP3-233ENST00000584186 SNX3O60493 162 aa11.68□□□□□ -0.54
CDK5RAP3-233ENST00000584186 DIRAS1O95057 198 aa11.68□□□□□ -0.54
CDK5RAP3-233ENST00000584186 SNAP29O95721 258 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms