RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 FAHP16930 419 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 PCMT1P22061 227 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 DCKP27707 260 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 HTR1FP30939 366 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 UQCRC1P31930 480 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 EIF1P41567 113 aaKnown RBP9.11□□□□□ -0.95
SS18-221ENST00000582448 MAP2K4P45985 399 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 RPS5P46782 204 aaKnown RBP9.11□□□□□ -0.95
SS18-221ENST00000582448 KRTAP10-2P60368 255 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 RPS7P62081 194 aaKnown RBP9.11□□□□□ -0.95
SS18-221ENST00000582448 EFNB1P98172 346 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 PLP2Q04941 152 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.11□□□□□ -0.95
SS18-221ENST00000582448 ALG10Q5BKT4 473 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 FAM69AQ5T7M9 428 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 SYT6Q5T7P8 510 aaPredicted RBP9.11□□□□□ -0.95
SS18-221ENST00000582448 LCN1P1Q5VSP4 162 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 C1orf140Q5VVS0 124 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 UBE2UQ5VVX9 321 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 SLC22A10Q63ZE4 541 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 OR5M10Q6IEU7 315 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 TMEM81Q6P7N7 255 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 ZNF367Q7RTV3 350 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 JAZF1Q86VZ6 243 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 CDC20BQ86Y33 519 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 CPOQ8IVL8 374 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 ZFP62Q8NB50 900 aaPredicted RBP9.11□□□□□ -0.95
SS18-221ENST00000582448 OR6S1Q8NH40 331 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 SGCDQ92629 289 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 ISOC1Q96CN7 298 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 NMD3Q96D46 503 aaKnown RBP9.11□□□□□ -0.95
SS18-221ENST00000582448 MRGPRX4Q96LA9 322 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 MYCBPQ99417 103 aaPredicted RBP9.11□□□□□ -0.95
SS18-221ENST00000582448 BCL7BQ9BQE9 202 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 RHNO1Q9BSD3 238 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 TAPBPLQ9BX59 468 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 RTN4RQ9BZR6 473 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 RBM38Q9H0Z9 239 aaKnown RBP9.11□□□□□ -0.95
SS18-221ENST00000582448 LDAHQ9H6V9 325 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 GALNT9Q9HCQ5 603 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 SACM1LQ9NTJ5 587 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 DEPPQ9NTK1 212 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 PTTG2Q9NZH5 202 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 MED11Q9P086 117 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 Q9UFV3 132 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 DIMT1Q9UNQ2 313 aaKnown RBP9.11□□□□□ -0.95
SS18-221ENST00000582448 EXOSC1Q9Y3B2 195 aaKnown RBP9.11□□□□□ -0.95
SS18-221ENST00000582448 LIPGQ9Y5X9 500 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 ABCA4P78363 2273 aa9.11□□□□□ -0.95
SS18-221ENST00000582448 IGKV1D-42A0A075B6H8 117 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 AQP7O14520 342 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 IMPA2O14732 288 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 ARPC3O15145 178 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 ZNF208O43345 1280 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 ZNF354AO60765 605 aaPredicted RBP9.1□□□□□ -0.95
SS18-221ENST00000582448 INMTO95050 263 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 TFPIP10646 304 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 APEHP13798 732 aaKnown RBP9.1□□□□□ -0.95
SS18-221ENST00000582448 C21orf33P30042 268 aaPredicted RBP9.1□□□□□ -0.95
SS18-221ENST00000582448 SLC15A1P46059 708 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 SLC16A1P53985 500 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 GAS1P54826 345 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 MED22Q15528 200 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 TOMM34Q15785 309 aaPredicted RBP9.1□□□□□ -0.95
SS18-221ENST00000582448 TIGD6Q17RP2 521 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 TIMM50Q3ZCQ8 353 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 KLHL12Q53G59 568 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 AADACL4Q5VUY2 407 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 RNLSQ5VYX0 342 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 GPR139Q6DWJ6 353 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 PLBD1Q6P4A8 553 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 MEPCEQ7L2J0 689 aaKnown RBP9.1□□□□□ -0.95
SS18-221ENST00000582448 SLC46A3Q7Z3Q1 461 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 SLC22A16Q86VW1 577 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 P2RY8Q86VZ1 359 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 DTX3Q8N9I9 347 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 PSD4Q8NDX1 1056 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 OR2M7Q8NG81 312 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 RNF138Q8WVD3 245 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 KISS1RQ969F8 398 aaPredicted RBP9.1□□□□□ -0.95
SS18-221ENST00000582448 SLC25A36Q96CQ1 311 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 ANGPTL4Q9BY76 406 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 DLL4Q9NR61 685 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 GRHPRQ9UBQ7 328 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 CHRNA9Q9UGM1 479 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 IER3IP1Q9Y5U9 82 aa9.1□□□□□ -0.95
SS18-221ENST00000582448 A0A0G2JMM0 328 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 A0A1W2PPB8 328 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 A0A1W2PRS3 328 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 TMEM72A0PK05 275 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 KIR3DP1A8MWS1 328 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 MCIDASD6RGH6 385 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 XKRYO14609 159 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 TRIM3O75382 744 aaPredicted RBP9.09□□□□□ -0.95
SS18-221ENST00000582448 HSMCR30P0CW71 290 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 IDUAP35475 653 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 FXYD6P3P58550 94 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 RPS4XP62701 263 aaKnown RBP9.09□□□□□ -0.95
SS18-221ENST00000582448 ITGADQ13349 1161 aa9.09□□□□□ -0.95
SS18-221ENST00000582448 PRAMEF20Q5VT98 475 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms