RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 TNFRSF1AP19438 455 aa11.52□□□□□ -0.57
CSNK1D-213ENST00000580446 ATP5F1P24539 256 aaPredicted RBP11.52□□□□□ -0.57
CSNK1D-213ENST00000580446 EPHA3P29320 983 aa11.52□□□□□ -0.57
CSNK1D-213ENST00000580446 KIR2DS4P43632 304 aa11.52□□□□□ -0.57
CSNK1D-213ENST00000580446 ERFP50548 548 aa11.52□□□□□ -0.57
CSNK1D-213ENST00000580446 PPP1CBP62140 327 aa11.52□□□□□ -0.57
CSNK1D-213ENST00000580446 HPCAP84074 193 aa11.52□□□□□ -0.57
CSNK1D-213ENST00000580446 CALCOCO2Q13137 446 aa11.52□□□□□ -0.57
CSNK1D-213ENST00000580446 SYPL1Q16563 259 aa11.52□□□□□ -0.57
CSNK1D-213ENST00000580446 MS4A18Q3C1V0 323 aa11.52□□□□□ -0.57
CSNK1D-213ENST00000580446 LSM12Q3MHD2 195 aaKnown RBP11.52□□□□□ -0.57
CSNK1D-213ENST00000580446 XKR7Q5GH72 579 aa11.52□□□□□ -0.57
CSNK1D-213ENST00000580446 MBNL2Q5VZF2 373 aaKnown RBP11.52□□□□□ -0.57
CSNK1D-213ENST00000580446 WBP2NLQ6ICG8 309 aa11.52□□□□□ -0.57
CSNK1D-213ENST00000580446 ZNF662Q6ZS27 426 aa11.52□□□□□ -0.57
CSNK1D-213ENST00000580446 RBM15BQ8NDT2 890 aaKnown RBP11.52□□□□□ -0.57
CSNK1D-213ENST00000580446 OR1J2Q8NGS2 313 aa11.52□□□□□ -0.57
CSNK1D-213ENST00000580446 FBXO25Q8TCJ0 367 aa11.52□□□□□ -0.57
CSNK1D-213ENST00000580446 MOAP1Q96BY2 351 aa11.52□□□□□ -0.57
CSNK1D-213ENST00000580446 NKX3-1Q99801 234 aaPredicted RBP11.52□□□□□ -0.57
CSNK1D-213ENST00000580446 C1orf50Q9BV19 199 aa11.52□□□□□ -0.57
CSNK1D-213ENST00000580446 LRMDAQ9H2I8 198 aa11.52□□□□□ -0.57
CSNK1D-213ENST00000580446 LOC100509620A0A075B734 347 aa11.51□□□□□ -0.57
CSNK1D-213ENST00000580446 ZNF726A6NNF4 738 aa11.51□□□□□ -0.57
CSNK1D-213ENST00000580446 H3BUX3 64 aa11.51□□□□□ -0.57
CSNK1D-213ENST00000580446 FBP1P09467 338 aa11.51□□□□□ -0.57
CSNK1D-213ENST00000580446 PRPH2P23942 346 aa11.51□□□□□ -0.57
CSNK1D-213ENST00000580446 CRHR1P34998 444 aa11.51□□□□□ -0.57
CSNK1D-213ENST00000580446 CRATP43155 626 aa11.51□□□□□ -0.57
CSNK1D-213ENST00000580446 PLTPP55058 493 aa11.51□□□□□ -0.57
CSNK1D-213ENST00000580446 HSF2Q03933 536 aa11.51□□□□□ -0.57
CSNK1D-213ENST00000580446 PSG7Q13046 419 aa11.51□□□□□ -0.57
CSNK1D-213ENST00000580446 KLRD1Q13241 179 aa11.51□□□□□ -0.57
CSNK1D-213ENST00000580446 GSTA3Q16772 222 aa11.51□□□□□ -0.57
CSNK1D-213ENST00000580446 ZNF404Q494X3 552 aa11.51□□□□□ -0.57
CSNK1D-213ENST00000580446 PABPC1L2AQ5JQF8 200 aa11.51□□□□□ -0.57
CSNK1D-213ENST00000580446 ZNF836Q6ZNA1 936 aa11.51□□□□□ -0.57
CSNK1D-213ENST00000580446 H1FNTQ75WM6 255 aaPredicted RBP11.51□□□□□ -0.57
CSNK1D-213ENST00000580446 SLC16A14Q7RTX9 510 aa11.51□□□□□ -0.57
CSNK1D-213ENST00000580446 VRK2Q86Y07 508 aa11.51□□□□□ -0.57
CSNK1D-213ENST00000580446 HIPK4Q8NE63 616 aa11.51□□□□□ -0.57
CSNK1D-213ENST00000580446 SDR9C7Q8NEX9 313 aa11.51□□□□□ -0.57
CSNK1D-213ENST00000580446 OR10AD1Q8NGE0 317 aa11.51□□□□□ -0.57
CSNK1D-213ENST00000580446 AKR7LQ8NHP1 331 aa11.51□□□□□ -0.57
CSNK1D-213ENST00000580446 L3HYPDHQ96EM0 354 aa11.51□□□□□ -0.57
CSNK1D-213ENST00000580446 DPY30Q9C005 99 aa11.51□□□□□ -0.57
CSNK1D-213ENST00000580446 TUBB1Q9H4B7 451 aa11.51□□□□□ -0.57
CSNK1D-213ENST00000580446 CTSZQ9UBR2 303 aa11.51□□□□□ -0.57
CSNK1D-213ENST00000580446 MEGF11A6BM72 1044 aa11.5□□□□□ -0.57
CSNK1D-213ENST00000580446 SLC28A1O00337 649 aa11.5□□□□□ -0.57
CSNK1D-213ENST00000580446 PHYHO14832 338 aa11.5□□□□□ -0.57
CSNK1D-213ENST00000580446 CHST1O43916 411 aa11.5□□□□□ -0.57
CSNK1D-213ENST00000580446 PF4P02776 101 aa11.5□□□□□ -0.57
CSNK1D-213ENST00000580446 TNFSF4P23510 183 aa11.5□□□□□ -0.57
CSNK1D-213ENST00000580446 STOMP27105 288 aa11.5□□□□□ -0.57
CSNK1D-213ENST00000580446 BIDP55957 195 aa11.5□□□□□ -0.57
CSNK1D-213ENST00000580446 PLP2Q04941 152 aa11.5□□□□□ -0.57
CSNK1D-213ENST00000580446 PGS1Q32NB8 556 aa11.5□□□□□ -0.57
CSNK1D-213ENST00000580446 VMO1Q7Z5L0 202 aa11.5□□□□□ -0.57
CSNK1D-213ENST00000580446 Q8NFD4 153 aa11.5□□□□□ -0.57
CSNK1D-213ENST00000580446 STK35Q8TDR2 534 aa11.5□□□□□ -0.57
CSNK1D-213ENST00000580446 C17orf50Q8WW18 174 aa11.5□□□□□ -0.57
CSNK1D-213ENST00000580446 RORBQ92753 470 aa11.5□□□□□ -0.57
CSNK1D-213ENST00000580446 LRR1Q96L50 414 aa11.5□□□□□ -0.57
CSNK1D-213ENST00000580446 SLC19A3Q9BZV2 496 aa11.5□□□□□ -0.57
CSNK1D-213ENST00000580446 SLC38A1Q9H2H9 487 aa11.5□□□□□ -0.57
CSNK1D-213ENST00000580446 MMADHCQ9H3L0 296 aaPredicted RBP11.5□□□□□ -0.57
CSNK1D-213ENST00000580446 SMURF1Q9HCE7 757 aa11.5□□□□□ -0.57
CSNK1D-213ENST00000580446 POLE3Q9NRF9 147 aa11.5□□□□□ -0.57
CSNK1D-213ENST00000580446 INPP5EQ9NRR6 644 aa11.5□□□□□ -0.57
CSNK1D-213ENST00000580446 SLC17A7Q9P2U7 560 aa11.5□□□□□ -0.57
CSNK1D-213ENST00000580446 LRRN3E7EW58 273 aa11.49□□□□□ -0.57
CSNK1D-213ENST00000580446 LSM1O15116 133 aaKnown RBP11.49□□□□□ -0.57
CSNK1D-213ENST00000580446 IL7RP16871 459 aa11.49□□□□□ -0.57
CSNK1D-213ENST00000580446 COPZ1P61923 177 aa11.49□□□□□ -0.57
CSNK1D-213ENST00000580446 SLC36A2Q495M3 483 aa11.49□□□□□ -0.57
CSNK1D-213ENST00000580446 ZMAT1Q5H9K5 638 aa11.49□□□□□ -0.57
CSNK1D-213ENST00000580446 LRFN4Q6PJG9 635 aa11.49□□□□□ -0.57
CSNK1D-213ENST00000580446 NHLRC1Q6VVB1 395 aa11.49□□□□□ -0.57
CSNK1D-213ENST00000580446 MOGAT3Q86VF5 341 aa11.49□□□□□ -0.57
CSNK1D-213ENST00000580446 ANKRD46Q86W74 232 aa11.49□□□□□ -0.57
CSNK1D-213ENST00000580446 TFAP2CQ92754 450 aa11.49□□□□□ -0.57
CSNK1D-213ENST00000580446 RCC1LQ96I51 464 aaKnown RBP11.49□□□□□ -0.57
CSNK1D-213ENST00000580446 C1orf198Q9H425 327 aa11.49□□□□□ -0.57
CSNK1D-213ENST00000580446 SIRT7Q9NRC8 400 aa11.49□□□□□ -0.57
CSNK1D-213ENST00000580446 SERTAD4Q9NUC0 356 aa11.49□□□□□ -0.57
CSNK1D-213ENST00000580446 EIF3KQ9UBQ5 218 aaKnown RBP11.49□□□□□ -0.57
CSNK1D-213ENST00000580446 TMCC3Q9ULS5 477 aa11.49□□□□□ -0.57
CSNK1D-213ENST00000580446 PPP2R2CQ9Y2T4 447 aa11.49□□□□□ -0.57
CSNK1D-213ENST00000580446 ANGPTL7O43827 346 aa11.48□□□□□ -0.57
CSNK1D-213ENST00000580446 OR10H3O60404 316 aa11.48□□□□□ -0.57
CSNK1D-213ENST00000580446 MMP7P09237 267 aaPredicted RBP11.48□□□□□ -0.57
CSNK1D-213ENST00000580446 C11orf88Q6PI97 169 aa11.48□□□□□ -0.57
CSNK1D-213ENST00000580446 SERPINA11Q86U17 422 aa11.48□□□□□ -0.57
CSNK1D-213ENST00000580446 SNX32Q86XE0 403 aa11.48□□□□□ -0.57
CSNK1D-213ENST00000580446 OR5AS1Q8N127 324 aa11.48□□□□□ -0.57
CSNK1D-213ENST00000580446 CLIP4Q8N3C7 705 aa11.48□□□□□ -0.57
CSNK1D-213ENST00000580446 FGFRL1Q8N441 504 aa11.48□□□□□ -0.57
CSNK1D-213ENST00000580446 SPERTQ8NA61 448 aa11.48□□□□□ -0.57
CSNK1D-213ENST00000580446 PAPD5Q8NDF8 572 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms