RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.03□□□□□ -1.93
CDH19-204ENST00000579658 FAM120CQ9NX05 1096 aaKnown RBP3.03□□□□□ -1.93
CDH19-204ENST00000579658 NPAP1Q9NZP6 1156 aa3.03□□□□□ -1.93
CDH19-204ENST00000579658 CCDC59Q9P031 241 aaKnown RBP3.03□□□□□ -1.93
CDH19-204ENST00000579658 FBLN5Q9UBX5 448 aa3.03□□□□□ -1.93
CDH19-204ENST00000579658 PRODH2Q9UF12 536 aa3.03□□□□□ -1.93
CDH19-204ENST00000579658 BTNL2Q9UIR0 455 aa3.03□□□□□ -1.93
CDH19-204ENST00000579658 SF3B6Q9Y3B4 125 aaKnown RBP3.03□□□□□ -1.93
CDH19-204ENST00000579658 OR10H1Q9Y4A9 318 aa3.03□□□□□ -1.93
CDH19-204ENST00000579658 DSCAMO60469 2012 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 A0A0G2JPF8 293 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 PNMA8CA0A1B0GUJ8 204 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 A0A1W2PPR1 153 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 TMEM89A2RUT3 159 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 ZSCAN5BA6NJL1 495 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 KDM4EB2RXH2 506 aaPredicted RBP3.02□□□□□ -1.93
CDH19-204ENST00000579658 HNRNPCL3B7ZW38 293 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 SHISA8B8ZZ34 492 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 OVOL3O00110 214 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 HMGN4O00479 90 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 TO15178 435 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 SCO2O43819 266 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 FADS1O60427 444 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 LMX1BO60663 402 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 FAM20BO75063 409 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 GCM2O75603 506 aaPredicted RBP3.02□□□□□ -1.93
CDH19-204ENST00000579658 ZNF682O95780 498 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 FADS2O95864 444 aaKnown RBP3.02□□□□□ -1.93
CDH19-204ENST00000579658 P04436 131 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 CDK1P06493 297 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 CSF1P09603 554 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 HNRNPCL4P0DMR1 293 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 SNRPBP14678 240 aaKnown RBP3.02□□□□□ -1.93
CDH19-204ENST00000579658 UQCRC2P22695 453 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 C21orf33P30042 268 aaPredicted RBP3.02□□□□□ -1.93
CDH19-204ENST00000579658 RPL3P39023 403 aaKnown RBP3.02□□□□□ -1.93
CDH19-204ENST00000579658 MAGEA5P43359 124 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 LIMS1P48059 325 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 ZNF136P52737 540 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 GAS1P54826 345 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 TPTEP56180 551 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 SELENOWP63302 87 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 IFITM2Q01629 132 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 SNTB1Q13884 538 aaKnown RBP3.02□□□□□ -1.93
CDH19-204ENST00000579658 CD226Q15762 336 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 STK11Q15831 433 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 MAPK14Q16539 360 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 ATAD3BQ5T9A4 648 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 ANXA8L1Q5VT79 327 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 FAM166AQ6J272 317 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 SHISA2Q6UWI4 295 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 PLXDC2Q6UX71 529 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 ANGPTL8Q6UXH0 198 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 AHSA2Q719I0 299 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 SSX8Q7RTT4 187 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 VTCN1Q7Z7D3 282 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.02□□□□□ -1.93
CDH19-204ENST00000579658 CCDC190Q86UF4 302 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 TAGAPQ8N103 731 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 PARP16Q8N5Y8 322 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 WDSUB1Q8N9V3 476 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 OR5M1Q8NGP8 315 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 ZPLD1Q8TCW7 415 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 ADAMTS15Q8TE58 950 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 PROX1Q92786 737 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 GGHQ92820 318 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 MAL2Q969L2 176 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 COL21A1Q96P44 957 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 MS4A4EQ96PG1 132 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 TNFRSF13CQ96RJ3 184 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 JMJD8Q96S16 334 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 SDF2Q99470 211 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 UQCC2Q9BRT2 126 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 COPS4Q9BT78 406 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 DOHHQ9BU89 302 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 CDCA4Q9BXL8 241 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 ACTRT3Q9BYD9 372 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 PIGUQ9H490 435 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 REEP1Q9H902 201 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 SIAEQ9HAT2 523 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 TPT1P8Q9HAU6 139 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 THUMPD1Q9NXG2 353 aaKnown RBP3.02□□□□□ -1.93
CDH19-204ENST00000579658 MED11Q9P086 117 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 FRRS1LQ9P0K9 344 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 FBXL2Q9UKC9 423 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 POU2F3Q9UKI9 436 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 TRAPPC4Q9Y296 219 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 SAMHD1Q9Y3Z3 626 aaKnown RBP3.02□□□□□ -1.93
CDH19-204ENST00000579658 PEX16Q9Y5Y5 336 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 DYSFO75923 2080 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 A0A075B6Q4 140 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 H3BUI4 141 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 hCG_2039718K7EN88 272 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 ADAMDEC1O15204 470 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 TRIM3O75382 744 aaPredicted RBP3.02□□□□□ -1.93
CDH19-204ENST00000579658 DIRAS1O95057 198 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 RCBTB2O95199 551 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 UTS2O95399 124 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 CHRM4P08173 479 aa3.02□□□□□ -1.93
CDH19-204ENST00000579658 ITGA5P08648 1049 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms