RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 SAMD8Q96LT4 415 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 LRGUKQ96M69 825 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 Q96M85 177 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 MUS81Q96NY9 551 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 ALKBH3Q96Q83 286 aaPredicted RBP3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 SNX18Q96RF0 628 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 MBOAT4Q96T53 435 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 SLC29A1Q99808 456 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 TMEM204Q9BSN7 226 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 NAA11Q9BSU3 229 aaPredicted RBP3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 KATNB1Q9BVA0 655 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 OSBPL10Q9BXB5 764 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 HCAR1Q9BXC0 346 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 GABARAPL3Q9BY60 117 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 OR10A4Q9H209 315 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 SLCO5A1Q9H2Y9 848 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 OR52D1Q9H346 318 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 TXNIPQ9H3M7 391 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 C12orf49Q9H741 205 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 REEP1Q9H902 201 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 SMURF2Q9HAU4 748 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 SLC25A19Q9HC21 320 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 GPR35Q9HC97 309 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 TIGARQ9NQ88 270 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 INIPQ9NRY2 104 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 B3GNT2Q9NY97 397 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 USE1Q9NZ43 259 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 NPAP1Q9NZP6 1156 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 VSX1Q9NZR4 365 aaPredicted RBP3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 NKX1-2Q9UD57 310 aaPredicted RBP3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 IL20RAQ9UHF4 553 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 ZNF346Q9UL40 294 aaKnown RBP3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 OAZ3Q9UMX2 235 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 MGAT4BQ9UQ53 548 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 NOSIPQ9Y314 301 aaKnown RBP3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 EMC9Q9Y3B6 208 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 FAM32AQ9Y421 112 aaKnown RBP3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 CDH10Q9Y6N8 788 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 AKAP9Q99996 3911 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 ITPR3Q14573 2671 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 MYO9AB2RTY4 2548 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 ARPC4-TTLL3A0A0A6YYG9 625 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 TEX13CA0A0J9YWL9 993 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 SLC22A23A1A5C7 686 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 A1L4Q6 167 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 OR6C68A6NDL8 312 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 ERICH4A6NGS2 130 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 OR5H1A6NKK0 313 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 ZAR1LA6NP61 321 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 EEF1E1-BLOC1S5C9J1V9 151 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 BLOC1S5-TXNDC5H3BN57 136 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 H7C1C5 153 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 EEF1E1O43324 174 aaKnown RBP3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 MGRN1O60291 552 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 OR10H3O60404 316 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 MRPL33O75394 65 aaKnown RBP3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 FBXO24O75426 580 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 CIB2O75838 187 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 LYZL6O75951 148 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 NDUFB2O95178 105 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 SOX14O95416 240 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 SLC2A10O95528 541 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 IGLV1-44P01699 117 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 DBHP09172 617 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 MMP7P09237 267 aaPredicted RBP3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 SAGP10523 405 aaPredicted RBP3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 OSMP13725 252 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 PRF1P14222 555 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 POU2F1P14859 743 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 ANPEPP15144 967 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 ACADSP16219 412 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 HIST1H1CP16403 213 aaKnown RBP3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 CTLA4P16410 223 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 ZNF43P17038 809 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 GABRB1P18505 474 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 SLC2A5P22732 501 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 ANOS1P23352 680 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 FASP25445 335 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 MPGP29372 298 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 SDHAP31040 664 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 CDKN2AP42771 156 aaKnown RBP3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 DAP3P51398 398 aaKnown RBP3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 BIDP55957 195 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 CTXN1P60606 82 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 PRPS1P60891 318 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 RPL27P61353 136 aaKnown RBP3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 LCN6P62502 163 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 ERVK-25P63136 954 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 HIST1H3AP68431 136 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 ROR2Q01974 943 aaKnown RBP3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 COX10Q12887 443 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 FOXD4Q12950 439 aaPredicted RBP3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 ITGADQ13349 1161 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 CAMK2DQ13557 499 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 KRR1Q13601 381 aaKnown RBP3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 SNTB1Q13884 538 aaKnown RBP3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 ENDOGQ14249 297 aaKnown RBP3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 P2RY6Q15077 328 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 TAF11Q15544 211 aa3.3□□□□□ -1.88
SMARCE1-215ENST00000578995 TAB1Q15750 504 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms