RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 PIGQQ9BRB3 760 aa9.05□□□□□ -0.96
SS18-210ENST00000578700 PTDSS2Q9BVG9 487 aa9.05□□□□□ -0.96
SS18-210ENST00000578700 REPIN1Q9BWE0 567 aaKnown RBP9.05□□□□□ -0.96
SS18-210ENST00000578700 ERVK13-1Q9NX77 482 aa9.05□□□□□ -0.96
SS18-210ENST00000578700 SEC14L4Q9UDX3 406 aa9.05□□□□□ -0.96
SS18-210ENST00000578700 FBXL2Q9UKC9 423 aa9.05□□□□□ -0.96
SS18-210ENST00000578700 ZNF346Q9UL40 294 aaKnown RBP9.05□□□□□ -0.96
SS18-210ENST00000578700 B3GALT5Q9Y2C3 310 aa9.05□□□□□ -0.96
SS18-210ENST00000578700 HDGFL3Q9Y3E1 203 aa9.05□□□□□ -0.96
SS18-210ENST00000578700 STAB1Q9NY15 2570 aa9.05□□□□□ -0.96
SS18-210ENST00000578700 NINQ8N4C6 2090 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 TUBAL3A6NHL2 446 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 LIPT2A6NK58 231 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 HSPB2A8KAH6 182 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 C12orf71A8MTZ7 269 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 DVL2O14641 736 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 APOL3O95236 402 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 ATE1O95260 518 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 LY6G6DO95868 133 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 MT-ND5P03915 603 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 SBK2P0C263 348 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 SPI1P17947 270 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 TCEA1P23193 301 aaKnown RBP9.04□□□□□ -0.96
SS18-210ENST00000578700 SRD5A2P31213 254 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 ACVR1BP36896 505 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 PEX19P40855 299 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 DIO1P49895 249 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 OR2B6P58173 313 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 TAS2R43P59537 309 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 RPL27P61353 136 aaKnown RBP9.04□□□□□ -0.96
SS18-210ENST00000578700 ACTA2P62736 377 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 ACTG2P63267 376 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 SLC35A1P78382 337 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 NKX6-1P78426 367 aaPredicted RBP9.04□□□□□ -0.96
SS18-210ENST00000578700 ZP4Q12836 540 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 HSPB2Q16082 182 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 GDPGP1Q6ZNW5 385 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 SHFQ7M4L6 423 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 ARIH2OSQ8N7S6 290 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 LRRC75AQ8NAA5 344 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 RELL2Q8NC24 303 aaPredicted RBP9.04□□□□□ -0.96
SS18-210ENST00000578700 NPEPL1Q8NDH3 523 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 ADPRHL1Q8NDY3 354 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 OR4F15Q8NGB8 312 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 OR6K6Q8NGW6 343 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 OR14L1PQ8NHC6 308 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 SMPDL3BQ92485 455 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 UFD1Q92890 307 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 RNASE6Q93091 150 aaKnown RBP9.04□□□□□ -0.96
SS18-210ENST00000578700 ZNF524Q96C55 264 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 RASD2Q96D21 266 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 ZHX1-C8orf76Q96EF9 292 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 TSPAN32Q96QS1 320 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 OR5M11Q96RB7 305 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 SNX18Q96RF0 628 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 KLHDC3Q9BQ90 382 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 DCUN1D5Q9BTE7 237 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 NAA50Q9GZZ1 169 aaKnown RBP9.04□□□□□ -0.96
SS18-210ENST00000578700 TXNIPQ9H3M7 391 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 SH2D2AQ9NP31 389 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 RPRD1BQ9NQG5 326 aaKnown RBP9.04□□□□□ -0.96
SS18-210ENST00000578700 TAS2R16Q9NYV7 291 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 TAS2R5Q9NYW4 299 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 SPRR3Q9UBC9 169 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 CLEC2DQ9UHP7 191 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 TRAPPC4Q9Y296 219 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 CAB39Q9Y376 341 aaPredicted RBP9.04□□□□□ -0.96
SS18-210ENST00000578700 NOX1Q9Y5S8 564 aa9.04□□□□□ -0.96
SS18-210ENST00000578700 FBN1P35555 2871 aaKnown RBP9.03□□□□□ -0.96
SS18-210ENST00000578700 LOC100506127A0A0U1RQW1 187 aa9.03□□□□□ -0.96
SS18-210ENST00000578700 NPIPB13A6NJU9 1138 aa9.03□□□□□ -0.96
SS18-210ENST00000578700 CENPBD1B2RD01 187 aa9.03□□□□□ -0.96
SS18-210ENST00000578700 NPIPB4C9JG80 1138 aa9.03□□□□□ -0.96
SS18-210ENST00000578700 FTCDNL1E5RQL4 147 aa9.03□□□□□ -0.96
SS18-210ENST00000578700 LINC01387J3KSC0 135 aa9.03□□□□□ -0.96
SS18-210ENST00000578700 SULT2B1O00204 365 aa9.03□□□□□ -0.96
SS18-210ENST00000578700 SMAD7O15105 426 aaKnown RBP9.03□□□□□ -0.96
SS18-210ENST00000578700 ARHGEF9O43307 516 aa9.03□□□□□ -0.96
SS18-210ENST00000578700 EIF1BO60739 113 aaKnown RBP9.03□□□□□ -0.96
SS18-210ENST00000578700 GLCEO94923 617 aa9.03□□□□□ -0.96
SS18-210ENST00000578700 PLGP00747 810 aaPredicted RBP9.03□□□□□ -0.96
SS18-210ENST00000578700 IGHMP01871 453 aa9.03□□□□□ -0.96
SS18-210ENST00000578700 GYPBP06028 91 aa9.03□□□□□ -0.96
SS18-210ENST00000578700 MRPL3P09001 348 aaKnown RBP9.03□□□□□ -0.96
SS18-210ENST00000578700 RFPL3SP0C7P2 107 aa9.03□□□□□ -0.96
SS18-210ENST00000578700 OR2T7P0C7T2 308 aa9.03□□□□□ -0.96
SS18-210ENST00000578700 LIMS3P0CW19 117 aa9.03□□□□□ -0.96
SS18-210ENST00000578700 LIMS4P0CW20 117 aa9.03□□□□□ -0.96
SS18-210ENST00000578700 EPXP11678 715 aa9.03□□□□□ -0.96
SS18-210ENST00000578700 NR2C1P13056 603 aa9.03□□□□□ -0.96
SS18-210ENST00000578700 SLC2A5P22732 501 aa9.03□□□□□ -0.96
SS18-210ENST00000578700 HOXC12P31275 282 aa9.03□□□□□ -0.96
SS18-210ENST00000578700 LIPAP38571 399 aa9.03□□□□□ -0.96
SS18-210ENST00000578700 ASCL1P50553 236 aa9.03□□□□□ -0.96
SS18-210ENST00000578700 TUBA1BP68363 451 aa9.03□□□□□ -0.96
SS18-210ENST00000578700 CSNK2A1P68400 391 aaPredicted RBP9.03□□□□□ -0.96
SS18-210ENST00000578700 BDH1Q02338 343 aa9.03□□□□□ -0.96
SS18-210ENST00000578700 HSF2Q03933 536 aa9.03□□□□□ -0.96
SS18-210ENST00000578700 FOXO1Q12778 655 aa9.03□□□□□ -0.96
SS18-210ENST00000578700 ACKR1Q16570 336 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms