RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 APH1BQ8WW43 257 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 HDAC2Q92769 488 aaKnown RBP7.09□□□□□ -1.28
COPS3-215ENST00000578317 RFKQ969G6 155 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 ZNF566Q969W8 418 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 RASD2Q96D21 266 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 BBC3Q96PG8 261 aaPredicted RBP7.09□□□□□ -1.28
COPS3-215ENST00000578317 RBP7Q96R05 134 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 OR2M2Q96R28 347 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 IL4I1Q96RQ9 567 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 NMNAT3Q96T66 252 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 JAM3Q9BX67 310 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 PLCXD1Q9NUJ7 323 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 MRPS18AQ9NVS2 196 aaKnown RBP7.09□□□□□ -1.28
COPS3-215ENST00000578317 MED29Q9NX70 200 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 HAO2Q9NYQ3 351 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 UBAP1Q9NZ09 502 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 MOKQ9UQ07 419 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 FAM215AQ9Y5M1 114 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 FKBP7Q9Y680 259 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 RP1L1Q8IWN7 2480 aaPredicted RBP7.08□□□□□ -1.28
COPS3-215ENST00000578317 E9PLN8 166 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 ZNHIT1O43257 154 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 MRPL33O75394 65 aaKnown RBP7.08□□□□□ -1.28
COPS3-215ENST00000578317 SERPINI2O75830 405 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 CNOT4O95628 575 aaKnown RBP7.08□□□□□ -1.28
COPS3-215ENST00000578317 RENP00797 406 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 STSP08842 583 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 CCDC159P0C7I6 412 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 CRABP1P29762 137 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 BLVRAP53004 296 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 TOP3AQ13472 1001 aaPredicted RBP7.08□□□□□ -1.28
COPS3-215ENST00000578317 STK11Q15831 433 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 SLC35D3Q5M8T2 416 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 LAIR2Q6ISS4 152 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 KRT80Q6KB66 452 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 LEG1Q6P5S2 330 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 RPTNQ6XPR3 784 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 CXXC5Q7LFL8 322 aaKnown RBP7.08□□□□□ -1.28
COPS3-215ENST00000578317 AAED1Q7RTV5 226 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 CPOQ8IVL8 374 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 GID4Q8IVV7 300 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 OR6V1Q8N148 313 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 Q8N1Y9 231 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 C9orf106Q8NAJ2 232 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 OR2T4Q8NH00 348 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 TMEM54Q969K7 222 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 CNBD2Q96M20 576 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 ZNF582Q96NG8 517 aaPredicted RBP7.08□□□□□ -1.28
COPS3-215ENST00000578317 NR1H4Q96RI1 486 aaPredicted RBP7.08□□□□□ -1.28
COPS3-215ENST00000578317 TEAD3Q99594 435 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 VKORC1Q9BQB6 163 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 TTYH2Q9BSA4 534 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 EMC6Q9BV81 110 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 LINC00470Q9BZP3 86 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 SMURF1Q9HCE7 757 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 TCF7L1Q9HCS4 588 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 HINT3Q9NQE9 182 aaKnown RBP7.08□□□□□ -1.28
COPS3-215ENST00000578317 PLSCR4Q9NRQ2 329 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 RASSF1Q9NS23 344 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 C14orf119Q9NWQ9 140 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 CLN6Q9NWW5 311 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 GLTPQ9NZD2 209 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.08□□□□□ -1.28
COPS3-215ENST00000578317 NOSIPQ9Y314 301 aaKnown RBP7.08□□□□□ -1.28
COPS3-215ENST00000578317 DNAJC13O75165 2243 aa7.08□□□□□ -1.28
COPS3-215ENST00000578317 RPL36A-HNRNPH2H7BZ11 118 aa7.07□□□□□ -1.28
COPS3-215ENST00000578317 ENTPD6O75354 484 aa7.07□□□□□ -1.28
COPS3-215ENST00000578317 SLC43A1O75387 559 aa7.07□□□□□ -1.28
COPS3-215ENST00000578317 TOXO94900 526 aa7.07□□□□□ -1.28
COPS3-215ENST00000578317 IL18BPO95998 194 aa7.07□□□□□ -1.28
COPS3-215ENST00000578317 GLI4P10075 376 aa7.07□□□□□ -1.28
COPS3-215ENST00000578317 SLC2A5P22732 501 aa7.07□□□□□ -1.28
COPS3-215ENST00000578317 AGTR1P30556 359 aa7.07□□□□□ -1.28
COPS3-215ENST00000578317 HTR1FP30939 366 aa7.07□□□□□ -1.28
COPS3-215ENST00000578317 KIR2DL2P43627 348 aaPredicted RBP7.07□□□□□ -1.28
COPS3-215ENST00000578317 SLC15A1P46059 708 aa7.07□□□□□ -1.28
COPS3-215ENST00000578317 SELENOPP49908 381 aa7.07□□□□□ -1.28
COPS3-215ENST00000578317 LGALS3BPQ08380 585 aa7.07□□□□□ -1.28
COPS3-215ENST00000578317 CAMK2DQ13557 499 aa7.07□□□□□ -1.28
COPS3-215ENST00000578317 MELKQ14680 651 aa7.07□□□□□ -1.28
COPS3-215ENST00000578317 GFOD2Q3B7J2 385 aa7.07□□□□□ -1.28
COPS3-215ENST00000578317 RBM48Q5RL73 367 aaKnown RBP7.07□□□□□ -1.28
COPS3-215ENST00000578317 TMEM211Q6ICI0 200 aa7.07□□□□□ -1.28
COPS3-215ENST00000578317 PLBD1Q6P4A8 553 aa7.07□□□□□ -1.28
COPS3-215ENST00000578317 DNM1P34Q6PK57 102 aa7.07□□□□□ -1.28
COPS3-215ENST00000578317 UGT2A3Q6UWM9 527 aa7.07□□□□□ -1.28
COPS3-215ENST00000578317 MEPCEQ7L2J0 689 aaKnown RBP7.07□□□□□ -1.28
COPS3-215ENST00000578317 WDFY1Q8IWB7 410 aa7.07□□□□□ -1.28
COPS3-215ENST00000578317 POMGNT2Q8NAT1 580 aa7.07□□□□□ -1.28
COPS3-215ENST00000578317 CYB561A3Q8NBI2 242 aa7.07□□□□□ -1.28
COPS3-215ENST00000578317 SDR9C7Q8NEX9 313 aa7.07□□□□□ -1.28
COPS3-215ENST00000578317 OR6K3Q8NGY3 331 aa7.07□□□□□ -1.28
COPS3-215ENST00000578317 NUAK2Q9H093 628 aa7.07□□□□□ -1.28
COPS3-215ENST00000578317 RACGAP1Q9H0H5 632 aa7.07□□□□□ -1.28
COPS3-215ENST00000578317 SYT4Q9H2B2 425 aa7.07□□□□□ -1.28
COPS3-215ENST00000578317 ASB6Q9NWX5 421 aa7.07□□□□□ -1.28
COPS3-215ENST00000578317 ZNF629Q9UEG4 869 aaPredicted RBP7.07□□□□□ -1.28
COPS3-215ENST00000578317 WARS2Q9UGM6 360 aaKnown RBP7.07□□□□□ -1.28
COPS3-215ENST00000578317 RALYQ9UKM9 306 aaKnown RBP7.07□□□□□ -1.28
COPS3-215ENST00000578317 B9D1Q9UPM9 204 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms