RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 TINAGL1Q9GZM7 467 aaPredicted RBP12.37□□□□□ -0.43
NDEL1-204ENST00000578172 CUTCQ9NTM9 273 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 DZANK1Q9NVP4 752 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 PRODH2Q9UF12 536 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 A0A087WV62 115 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 NPIPA5E9PKD4 350 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 F5H0A9 414 aaPredicted RBP12.37□□□□□ -0.43
NDEL1-204ENST00000578172 ACOT7O00154 380 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 RAB3DO95716 219 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 PRAMEF20Q5VT98 475 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 SLC29A4Q7RTT9 530 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 OR11G2Q8NGC1 345 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 TM4SF19Q96DZ7 209 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 SCMH1Q96GD3 660 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 TMEM41AQ96HV5 264 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 TSPAN32Q96QS1 320 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 SCP2D1Q9UJQ7 156 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 NPIPA1Q9UND3 350 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 SUSD5O60279 629 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 GIMD1P0DJR0 217 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 GLI4P10075 376 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 MMP15P51511 669 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 BTG1P62324 171 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 ZNF74Q16587 644 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 C2orf76Q3KRA6 126 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 MESTQ5EB52 335 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 METTL11BQ5VVY1 283 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 CD276Q5ZPR3 534 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 OR52W1Q6IF63 320 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 PWWP2BQ6NUJ5 590 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 TMEM88Q6PEY1 159 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 OR13C9Q8NGT0 318 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 LMAN1LQ9HAT1 526 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 FSCN3Q9NQT6 498 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 KIR2DS5A0A0G2JLQ3 304 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 A0A0G2JNG1 304 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 KANTRA0A1W2PQU2 76 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 KIR2DS3K7RE56 304 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 AGPAT2O15120 278 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 HLA-DQB1P01920 261 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 IFNA6P05013 189 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 CALCBP10092 127 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 ACHEP22303 614 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 SLC6A9P48067 706 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 CAMK2DQ13557 499 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 KIR2DS5Q14953 304 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 C2orf68Q2NKX9 166 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 COX15Q7KZN9 410 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 ZFP82Q8N141 532 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 ZNF454Q8N9F8 522 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 FLVCR1-AS1Q8TAF5 88 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 FAM3DQ96BQ1 224 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 ZC3H10Q96K80 434 aaKnown RBP12.36□□□□□ -0.43
NDEL1-204ENST00000578172 C7orf50Q9BRJ6 194 aaKnown RBP12.36□□□□□ -0.43
NDEL1-204ENST00000578172 FOXQ1Q9C009 403 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 MMP25Q9NPA2 562 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 CTSFQ9UBX1 484 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 ZNF230Q9UIE0 474 aaPredicted RBP12.36□□□□□ -0.43
NDEL1-204ENST00000578172 HTR3BO95264 441 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 CYB5AP00167 134 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 ZP1P60852 638 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 ZNF117Q03924 483 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 SCRN3Q0VDG4 424 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 ZNF615Q8N8J6 731 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 NUDCD2Q8WVJ2 157 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 MFFQ9GZY8 342 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 GSKIPQ9P0R6 139 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 PTPRZ1P23471 2315 aaPredicted RBP12.36□□□□□ -0.43
NDEL1-204ENST00000578172 DNAJC13O75165 2243 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 FRYLO94915 3013 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 DCNP07585 359 aaKnown RBP12.36□□□□□ -0.43
NDEL1-204ENST00000578172 CTLA4P16410 223 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 S1PR1P21453 382 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 RPS11P62280 158 aaKnown RBP eCLIP12.36□□□□□ -0.43
NDEL1-204ENST00000578172 UNQ6126/PRO20091Q6UXV3 157 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 CCDC36Q8IYA8 594 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 TMEM185AQ8NFB2 350 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 SLC2A12Q8TD20 617 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 C2CD4CQ8TF44 421 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 NUDT9Q9BW91 350 aa12.36□□□□□ -0.43
NDEL1-204ENST00000578172 ZNF768Q9H5H4 540 aaKnown RBP12.36□□□□□ -0.43
NDEL1-204ENST00000578172 KIF26AQ9ULI4 1882 aaPredicted RBP12.36□□□□□ -0.43
NDEL1-204ENST00000578172 CDK2AP1O14519 115 aa12.35□□□□□ -0.43
NDEL1-204ENST00000578172 ZNHIT1O43257 154 aa12.35□□□□□ -0.43
NDEL1-204ENST00000578172 LYPD3O95274 346 aa12.35□□□□□ -0.43
NDEL1-204ENST00000578172 RD3LP0DJH9 198 aa12.35□□□□□ -0.43
NDEL1-204ENST00000578172 CBR1P16152 277 aa12.35□□□□□ -0.43
NDEL1-204ENST00000578172 RIDAP52758 137 aaKnown RBP12.35□□□□□ -0.43
NDEL1-204ENST00000578172 FAM199XQ6PEV8 388 aaPredicted RBP12.35□□□□□ -0.43
NDEL1-204ENST00000578172 DND1Q8IYX4 353 aaKnown RBP12.35□□□□□ -0.43
NDEL1-204ENST00000578172 BEST3Q8N1M1 668 aa12.35□□□□□ -0.43
NDEL1-204ENST00000578172 EMC7Q9NPA0 242 aa12.35□□□□□ -0.43
NDEL1-204ENST00000578172 SDHAF2Q9NX18 166 aa12.35□□□□□ -0.43
NDEL1-204ENST00000578172 NTMQ9P121 344 aa12.35□□□□□ -0.43
NDEL1-204ENST00000578172 EPHA6Q9UF33 1036 aa12.35□□□□□ -0.43
NDEL1-204ENST00000578172 FOXJ3Q9UPW0 622 aa12.35□□□□□ -0.43
NDEL1-204ENST00000578172 SPTY2D1-AS1A0A0U1RR47 76 aa12.35□□□□□ -0.43
NDEL1-204ENST00000578172 A0A1B0GV50 99 aa12.35□□□□□ -0.43
NDEL1-204ENST00000578172 TMEM269A0A1B0GVZ9 245 aa12.35□□□□□ -0.43
NDEL1-204ENST00000578172 FAM221BA6H8Z2 402 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms