RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 BEX1Q9HBH7 125 aa8.51□□□□□ -1.05
NPLOC4-220ENST00000576940 TMEM27Q9HBJ8 222 aa8.51□□□□□ -1.05
NPLOC4-220ENST00000576940 SLC22A3O75751 556 aa8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 NGFP01138 241 aa8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 IL6P05231 212 aa8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 PGA4P0DJD7 388 aa8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 PGA3P0DJD8 388 aa8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 BGNP21810 368 aa8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 STOMP27105 288 aa8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 EPHA3P29320 983 aa8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 HSF2Q03933 536 aa8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 DEFB112Q30KQ8 113 aa8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 PABPC1L2AQ5JQF8 200 aa8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 CEP85LQ5SZL2 805 aa8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 OLFML2AQ68BL7 652 aa8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 ASPHD2Q6ICH7 369 aa8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 BRICD5Q6PL45 260 aa8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 FIP1L1Q6UN15 594 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 LRRC28Q86X40 367 aaPredicted RBP8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 BBS10Q8TAM1 723 aa8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 SLC25A44Q96H78 314 aaPredicted RBP8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 ZNF347Q96SE7 839 aa8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 DIRC2Q96SL1 478 aa8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 RBM4BQ9BQ04 359 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 ROPN1BQ9BZX4 212 aaPredicted RBP8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 ROPN1Q9HAT0 212 aaPredicted RBP8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 A4GALTQ9NPC4 353 aa8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 TMEM106BQ9NUM4 274 aa8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 THUMPD1Q9NXG2 353 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 C1RLQ9NZP8 487 aa8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 SELENONQ9NZV5 590 aa8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 LGALS13Q9UHV8 139 aa8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 TRIM33Q9UPN9 1127 aa8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 NBEAL2Q6ZNJ1 2754 aa8.5□□□□□ -1.05
NPLOC4-220ENST00000576940 LOC100509620A0A075B734 347 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 A0A1B0GUS0 222 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 C5orf49A4QMS7 147 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 C5orf58C9J3I9 102 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 M0QZ24 198 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 CLIC1O00299 241 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 RNF13O43567 381 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 CH25HO95992 272 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 PLATP00750 562 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 CRYBA1P05813 215 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 ETS2P15036 469 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 ZNF32P17041 273 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 CDAP32320 146 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 RAG2P55895 527 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 TNFAIP6P98066 277 aaPredicted RBP8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 ZMYND11Q15326 602 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 TMEM155Q4W5P6 130 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 FBLN7Q53RD9 439 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 TNFAIP8L3Q5GJ75 292 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 C6orf10Q5SRN2 563 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 MBNL2Q5VZF2 373 aaKnown RBP8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 BRD3OSQ6XYD6 125 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 C9orf139Q6ZV77 190 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 DPPA2Q7Z7J5 298 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 C10orf111Q8N326 155 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 SPICQ8N5J4 248 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 POU5F2Q8N7G0 328 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 GOLGA6L1Q8N7Z2 621 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 HIPK4Q8NE63 616 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 OR10S1Q8NGN2 331 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 OR4F5Q8NH21 305 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 AKR7LQ8NHP1 331 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 NFKBIDQ8NI38 313 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 ZDHHC16Q969W1 377 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 ITCHQ96J02 903 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 POM121L2Q96KW2 1035 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 ARHGDIGQ99819 225 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 EIF3KQ9UBQ5 218 aaKnown RBP8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 HAO1Q9UJM8 370 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 ZDHHC8Q9ULC8 765 aa8.49□□□□□ -1.05
NPLOC4-220ENST00000576940 TRAV40A0A0B4J280 105 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 CLPSL1A2RUU4 121 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 A8MXK9 166 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 F5H0A9 414 aaPredicted RBP8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 TIMM23O14925 209 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 BIRC5O15392 142 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 MGRN1O60291 552 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 ENTPD5O75356 428 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 ALX3O95076 343 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 ZNF205O95201 554 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 MT-ATP6P00846 226 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 CD55P08174 381 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 ADH4P08319 380 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 WNT2P09544 360 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 BMP2P12643 396 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 SELEP16581 610 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 LIPAP38571 399 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 RGS8P57771 180 aaPredicted RBP8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 CLRN1P58418 232 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 BTG1P62324 171 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 PSG4Q00888 419 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 PAX2Q02962 417 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 IFFO1Q0D2I5 559 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 STX3Q13277 289 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 ZNF74Q16587 644 aa8.48□□□□□ -1.05
NPLOC4-220ENST00000576940 HIST3H3Q16695 136 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms