RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 ZMAT5Q9UDW3 170 aaKnown RBP12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 PPM1DO15297 605 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 CTNSO60931 367 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 GUCA2AQ02747 115 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 MPEG1Q2M385 716 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 LRRTM1Q86UE6 522 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 GKN2Q86XP6 184 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 MUC20Q8N307 709 aaPredicted RBP12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 PELI1Q96FA3 418 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 TSSK2Q96PF2 358 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 CYB5R1Q9UHQ9 305 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 BET1O15155 118 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 CSF2RAP15509 400 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 TAGLN2P37802 199 aaKnown RBP12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 RAB38P57729 211 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 BATFQ16520 125 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 SLC36A2Q495M3 483 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 FJX1Q86VR8 437 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 ZDHHC12Q96GR4 267 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 FN3KRPQ9HA64 309 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 TNFSF12-TNFSF13A0A0A6YY99 330 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 TNFSF12O43508 249 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 ITGB2P05107 769 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 CTSLP07711 333 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 FBLP22087 321 aaKnown RBP12□□□□□ -0.49
PCDHGB3-201ENST00000576222 CST5P28325 142 aaPredicted RBP12□□□□□ -0.49
PCDHGB3-201ENST00000576222 ZNF93P35789 620 aaPredicted RBP12□□□□□ -0.49
PCDHGB3-201ENST00000576222 MEOX2P50222 304 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 POU3F1Q03052 451 aaPredicted RBP12□□□□□ -0.49
PCDHGB3-201ENST00000576222 MCATQ8IVS2 390 aaKnown RBP12□□□□□ -0.49
PCDHGB3-201ENST00000576222 TMEM156Q8N614 296 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 RNF128Q8TEB7 428 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 FRZBQ92765 325 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 NIPSNAP3BQ9BS92 247 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 TAS2R4Q9NYW5 299 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 KCNS2Q9ULS6 477 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 A0A087WZY1 265 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 PRSS38A1L453 326 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 TAAR5O14804 337 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 TRHRP34981 398 aaPredicted RBP12□□□□□ -0.49
PCDHGB3-201ENST00000576222 RPS27P42677 84 aaKnown RBP12□□□□□ -0.49
PCDHGB3-201ENST00000576222 EEF1A1P5Q5VTE0 462 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 FCRL6Q6DN72 434 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 Q6ZRG5 221 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 OR4D6Q8NGJ1 314 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 LDAHQ9H6V9 325 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 SLC22A11Q9NSA0 550 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 FOXJ3Q9UPW0 622 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 VDAC3Q9Y277 283 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 URGCP-MRPS24S4R325 110 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 NPIPB8E9PQR5 432 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 H7C1Q1 480 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 ADAM10O14672 748 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 GLSO94925 669 aaPredicted RBP12□□□□□ -0.49
PCDHGB3-201ENST00000576222 SLC35E2P0CK97 266 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 OMGP23515 440 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 BLVRBP30043 206 aaPredicted RBP12□□□□□ -0.49
PCDHGB3-201ENST00000576222 NTSR1P30989 418 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 PXNP49023 591 aaPredicted RBP12□□□□□ -0.49
PCDHGB3-201ENST00000576222 TMEM65Q6PI78 240 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 LYG2Q86SG7 212 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 PLPP5Q8NEB5 264 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 OR1S1Q8NH92 325 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 OR1F2PQ96R84 312 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 OR52A1Q9UKL2 312 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 DAPP1Q9UN19 280 aa12□□□□□ -0.49
PCDHGB3-201ENST00000576222 LSM2Q9Y333 95 aaKnown RBP12□□□□□ -0.49
PCDHGB3-201ENST00000576222 MYO7AQ13402 2215 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 JTBO76095 146 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 FABP1P07148 127 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 HEXBP07686 556 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 CHRM2P08172 466 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 CPN1P15169 458 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 EPHA1P21709 976 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 MLC1Q15049 377 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 SLC25A30Q5SVS4 291 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 B3GNTL1Q67FW5 361 aaPredicted RBP11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 CMTM1Q8IZ96 169 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 ZG16BQ96DA0 208 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 BORCS8Q96FH0 119 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 DCTN6O00399 190 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 TBX19O60806 448 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 EOGTQ5NDL2 527 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 HIST2H3AQ71DI3 136 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 ANGPTL5Q86XS5 388 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 LINC00346Q8IVM7 164 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 OR9K2Q8NGE7 335 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 MTFP1Q9UDX5 166 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 OR2C1O95371 312 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 CEBPBP17676 345 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 SNRPEP62304 92 aaKnown RBP11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 SSBP1Q04837 148 aaKnown RBP11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 SMAD2Q15796 467 aaKnown RBP11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 TANGO2Q6ICL3 276 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 MRPL41Q8IXM3 137 aaKnown RBP11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 OR4D10Q8NGI6 311 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 C1orf198Q9H425 327 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 RHOFQ9HBH0 211 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 NTMQ9P121 344 aa11.99□□□□□ -0.49
PCDHGB3-201ENST00000576222 SIGLEC7Q9Y286 467 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms