RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 ZYG11AQ6WRX3 759 aa4.94□□□□□ -1.62
SMG6-219ENST00000575663 PIWIL3Q7Z3Z3 882 aaKnown RBP4.94□□□□□ -1.62
SMG6-219ENST00000575663 DPPA2Q7Z7J5 298 aa4.94□□□□□ -1.62
SMG6-219ENST00000575663 HMGN2P46Q86SG4 172 aa4.94□□□□□ -1.62
SMG6-219ENST00000575663 ZNF584Q8IVC4 421 aa4.94□□□□□ -1.62
SMG6-219ENST00000575663 C20orf196Q8IYI0 205 aa4.94□□□□□ -1.62
SMG6-219ENST00000575663 GALNT4Q8N4A0 578 aa4.94□□□□□ -1.62
SMG6-219ENST00000575663 BHLHE22Q8NFJ8 381 aaPredicted RBP4.94□□□□□ -1.62
SMG6-219ENST00000575663 OR4S1Q8NGB4 309 aa4.94□□□□□ -1.62
SMG6-219ENST00000575663 OR4A15Q8NGL6 344 aa4.94□□□□□ -1.62
SMG6-219ENST00000575663 OR1J1Q8NGS3 322 aa4.94□□□□□ -1.62
SMG6-219ENST00000575663 OR6N1Q8NGY5 312 aa4.94□□□□□ -1.62
SMG6-219ENST00000575663 OR2T11Q8NH01 316 aa4.94□□□□□ -1.62
SMG6-219ENST00000575663 PNPT1Q8TCS8 783 aaKnown RBP4.94□□□□□ -1.62
SMG6-219ENST00000575663 GEMIN6Q8WXD5 167 aaKnown RBP4.94□□□□□ -1.62
SMG6-219ENST00000575663 RAB40AQ8WXH6 277 aa4.94□□□□□ -1.62
SMG6-219ENST00000575663 GATAD2BQ8WXI9 593 aa4.94□□□□□ -1.62
SMG6-219ENST00000575663 PLEKHA8Q96JA3 519 aa4.94□□□□□ -1.62
SMG6-219ENST00000575663 PPP3R2Q96LZ3 170 aa4.94□□□□□ -1.62
SMG6-219ENST00000575663 OCSTAMPQ9BR26 566 aa4.94□□□□□ -1.62
SMG6-219ENST00000575663 DUSP26Q9BV47 211 aa4.94□□□□□ -1.62
SMG6-219ENST00000575663 MMADHCQ9H3L0 296 aaPredicted RBP4.94□□□□□ -1.62
SMG6-219ENST00000575663 C16orf95Q9H693 158 aa4.94□□□□□ -1.62
SMG6-219ENST00000575663 RNF121Q9H920 327 aa4.94□□□□□ -1.62
SMG6-219ENST00000575663 CACYBPQ9HB71 228 aaKnown RBP4.94□□□□□ -1.62
SMG6-219ENST00000575663 ZNF224Q9NZL3 707 aa4.94□□□□□ -1.62
SMG6-219ENST00000575663 B3GAT1Q9P2W7 334 aa4.94□□□□□ -1.62
SMG6-219ENST00000575663 HAO1Q9UJM8 370 aa4.94□□□□□ -1.62
SMG6-219ENST00000575663 TRIM33Q9UPN9 1127 aa4.94□□□□□ -1.62
SMG6-219ENST00000575663 ZNF726A6NNF4 738 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 CEACAM18A8MTB9 384 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 FTCDNL1E5RQL4 147 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 M0R082 166 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 RNASET2O00584 256 aaKnown RBP4.93□□□□□ -1.62
SMG6-219ENST00000575663 AZIN1O14977 448 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 GPR37O15354 613 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 SNX3O60493 162 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 NPHS1O60500 1241 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 NPIPB7O75200 414 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 SNNO75324 88 aaPredicted RBP4.93□□□□□ -1.62
SMG6-219ENST00000575663 SPAG7O75391 227 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 MPIG6BO95866 241 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 DBIP07108 87 aaKnown RBP4.93□□□□□ -1.62
SMG6-219ENST00000575663 CD55P08174 381 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 VIMP08670 466 aaKnown RBP4.93□□□□□ -1.62
SMG6-219ENST00000575663 LINC00032P0C843 101 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 CCL2P13500 99 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 NQO1P15559 274 aaKnown RBP4.93□□□□□ -1.62
SMG6-219ENST00000575663 PRPS1L1P21108 318 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 APLNRP35414 380 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 CHI3L1P36222 383 aaPredicted RBP4.93□□□□□ -1.62
SMG6-219ENST00000575663 RPS5P46782 204 aaKnown RBP4.93□□□□□ -1.62
SMG6-219ENST00000575663 CSNK1A1P48729 337 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 MMP15P51511 669 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 COL10A1Q03692 680 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 EGR3Q06889 387 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 CD69Q07108 199 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 DBPQ10586 325 aaPredicted RBP4.93□□□□□ -1.62
SMG6-219ENST00000575663 FUT5Q11128 374 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 STX3Q13277 289 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 PTGR1Q14914 329 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 ZNF718Q3SXZ3 478 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 SLC36A2Q495M3 483 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 NRN1LQ496H8 165 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 KLHL22Q53GT1 634 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 OXLD1Q5BKU9 147 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 PHYHD1Q5SRE7 291 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 METTL21CQ5VZV1 264 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 NXNQ6DKJ4 435 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 Q6ZSV7 163 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 NLRC3Q7RTR2 1065 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 ZER1Q7Z7L7 766 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 LSRQ86X29 649 aaPredicted RBP4.93□□□□□ -1.62
SMG6-219ENST00000575663 LRRC28Q86X40 367 aaPredicted RBP4.93□□□□□ -1.62
SMG6-219ENST00000575663 LRRC34Q8IZ02 419 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 MIER2Q8N344 545 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 POU5F2Q8N7G0 328 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 ZNF283Q8N7M2 679 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 ANKRD42Q8N9B4 389 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 ZSCAN4Q8NAM6 433 aaPredicted RBP4.93□□□□□ -1.62
SMG6-219ENST00000575663 FNDC5Q8NAU1 212 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 CCDC197Q8NCU1 140 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 ADPRHL1Q8NDY3 354 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 VANGL1Q8TAA9 524 aaPredicted RBP4.93□□□□□ -1.62
SMG6-219ENST00000575663 ZNF417Q8TAU3 575 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 FAM81AQ8TBF8 368 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 IPCEF1Q8WWN9 437 aaPredicted RBP4.93□□□□□ -1.62
SMG6-219ENST00000575663 SLC38A4Q969I6 547 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 PHF21AQ96BD5 680 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 COQ8BQ96D53 544 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 MARS2Q96GW9 593 aaKnown RBP4.93□□□□□ -1.62
SMG6-219ENST00000575663 MOGAT1Q96PD6 335 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 TRNT1Q96Q11 434 aaKnown RBP4.93□□□□□ -1.62
SMG6-219ENST00000575663 ZNF587Q96SQ5 575 aaPredicted RBP4.93□□□□□ -1.62
SMG6-219ENST00000575663 NUDT16L1Q9BRJ7 211 aaKnown RBP4.93□□□□□ -1.62
SMG6-219ENST00000575663 TRIM15Q9C019 465 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 DPAGT1Q9H3H5 408 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 ACOXLQ9NUZ1 547 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 IL20Q9NYY1 176 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 SACSQ9NZJ4 4579 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms