RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 ATXN7O15265 892 aaPredicted RBP21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 TOXO94900 526 aa21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 MPZL1O95297 269 aa21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 HOXD4P09016 255 aaPredicted RBP21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 SBK2P0C263 348 aa21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 PER3P56645 1201 aa21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 FOXF2Q12947 444 aa21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 FAM214BQ7L5A3 538 aa21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 CNEP1R1Q8N9A8 125 aa21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 ST6GALNAC3Q8NDV1 305 aa21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 ZNF837Q96EG3 531 aaPredicted RBP21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 TMEM80Q96HE8 168 aa21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 SIGLEC11Q96RL6 698 aa21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 EMC9Q9Y3B6 208 aa21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 RAB36O95755 333 aa21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 FADS2O95864 444 aaKnown RBP21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 CDAP32320 146 aa21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 MEP1BQ16820 701 aa21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 C10orf128Q5T292 105 aa21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 ERI1Q8IV48 349 aaKnown RBP21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 GLB1L2Q8IW92 636 aa21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 HTRA1Q92743 480 aa21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 RBM24Q9BX46 236 aaKnown RBP21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 WDR76Q9H967 626 aa21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 CRLF2Q9HC73 371 aa21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 FGF20Q9NP95 211 aaPredicted RBP21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 B3GAT2Q9NPZ5 323 aa21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 SLC7A10Q9NS82 523 aa21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 MRPL22Q9NWU5 206 aaKnown RBP21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 UGT2A1Q9Y4X1 527 aa21.23■□□□□ 0.99
ATPAF1-213ENST00000574428 DOCK7Q96N67 2140 aa21.22■□□□□ 0.99
ATPAF1-213ENST00000574428 IRGMA1A4Y4 181 aa21.22■□□□□ 0.99
ATPAF1-213ENST00000574428 KRT33AO76009 404 aa21.22■□□□□ 0.99
ATPAF1-213ENST00000574428 TFP02787 698 aa21.22■□□□□ 0.99
ATPAF1-213ENST00000574428 GAAP10253 952 aa21.22■□□□□ 0.99
ATPAF1-213ENST00000574428 KIR2DL2P43627 348 aaPredicted RBP21.22■□□□□ 0.99
ATPAF1-213ENST00000574428 ZNF133P52736 654 aaPredicted RBP21.22■□□□□ 0.99
ATPAF1-213ENST00000574428 POU4F2Q12837 409 aa21.22■□□□□ 0.99
ATPAF1-213ENST00000574428 PRSS48Q7RTY5 328 aa21.22■□□□□ 0.99
ATPAF1-213ENST00000574428 TIGD4Q8IY51 512 aa21.22■□□□□ 0.99
ATPAF1-213ENST00000574428 POMGNT2Q8NAT1 580 aa21.22■□□□□ 0.99
ATPAF1-213ENST00000574428 SLC26A10Q8NG04 563 aa21.22■□□□□ 0.99
ATPAF1-213ENST00000574428 MYCBPQ99417 103 aaPredicted RBP21.22■□□□□ 0.99
ATPAF1-213ENST00000574428 TSC22D3Q99576 134 aa21.22■□□□□ 0.99
ATPAF1-213ENST00000574428 TBX5Q99593 518 aa21.22■□□□□ 0.99
ATPAF1-213ENST00000574428 TTYH2Q9BSA4 534 aa21.22■□□□□ 0.99
ATPAF1-213ENST00000574428 RSL24D1Q9UHA3 163 aaKnown RBP21.22■□□□□ 0.99
ATPAF1-213ENST00000574428 DIMT1Q9UNQ2 313 aaKnown RBP21.22■□□□□ 0.99
ATPAF1-213ENST00000574428 EPG5Q9HCE0 2579 aa21.22■□□□□ 0.99
ATPAF1-213ENST00000574428 SHANK1Q9Y566 2161 aa21.21■□□□□ 0.99
ATPAF1-213ENST00000574428 J3QRE1 110 aa21.21■□□□□ 0.99
ATPAF1-213ENST00000574428 DHHO43323 396 aa21.21■□□□□ 0.99
ATPAF1-213ENST00000574428 GLI4P10075 376 aa21.21■□□□□ 0.99
ATPAF1-213ENST00000574428 PCMT1P22061 227 aa21.21■□□□□ 0.99
ATPAF1-213ENST00000574428 PAX7P23759 505 aa21.21■□□□□ 0.99
ATPAF1-213ENST00000574428 HCCSP53701 268 aa21.21■□□□□ 0.99
ATPAF1-213ENST00000574428 OR10H4Q8NGA5 316 aa21.21■□□□□ 0.99
ATPAF1-213ENST00000574428 SEC61A2Q9H9S3 476 aa21.21■□□□□ 0.99
ATPAF1-213ENST00000574428 PRSS50Q9UI38 385 aa21.21■□□□□ 0.99
ATPAF1-213ENST00000574428 ZGRF1Q86YA3 2104 aa21.21■□□□□ 0.99
ATPAF1-213ENST00000574428 KALRNO60229 2985 aa21.2■□□□□ 0.99
ATPAF1-213ENST00000574428 SCG5P05408 212 aa21.2■□□□□ 0.99
ATPAF1-213ENST00000574428 LAP3P28838 519 aa21.2■□□□□ 0.99
ATPAF1-213ENST00000574428 TTKP33981 857 aa21.2■□□□□ 0.99
ATPAF1-213ENST00000574428 RPS27P42677 84 aaKnown RBP21.2■□□□□ 0.99
ATPAF1-213ENST00000574428 BLVRAP53004 296 aa21.2■□□□□ 0.99
ATPAF1-213ENST00000574428 ROR2Q01974 943 aaKnown RBP21.2■□□□□ 0.99
ATPAF1-213ENST00000574428 RIPPLY2Q5TAB7 128 aa21.2■□□□□ 0.99
ATPAF1-213ENST00000574428 VWA1Q6PCB0 445 aa21.2■□□□□ 0.99
ATPAF1-213ENST00000574428 CLVS1Q8IUQ0 354 aaPredicted RBP21.2■□□□□ 0.99
ATPAF1-213ENST00000574428 UBE2J2Q8N2K1 259 aa21.2■□□□□ 0.99
ATPAF1-213ENST00000574428 NAXEQ8NCW5 288 aa21.2■□□□□ 0.99
ATPAF1-213ENST00000574428 OR13F1Q8NGS4 319 aa21.2■□□□□ 0.99
ATPAF1-213ENST00000574428 INTS14Q96SY0 518 aa21.2■□□□□ 0.99
ATPAF1-213ENST00000574428 LINC00470Q9BZP3 86 aa21.2■□□□□ 0.99
ATPAF1-213ENST00000574428 GPR35Q9HC97 309 aa21.2■□□□□ 0.99
ATPAF1-213ENST00000574428 ARHGAP21Q5T5U3 1957 aa21.2■□□□□ 0.98
ATPAF1-213ENST00000574428 IL2RAP01589 272 aa21.2■□□□□ 0.98
ATPAF1-213ENST00000574428 TMIGD3P0DMS9 266 aaPredicted RBP21.2■□□□□ 0.98
ATPAF1-213ENST00000574428 PSKH1P11801 424 aa21.2■□□□□ 0.98
ATPAF1-213ENST00000574428 DCKP27707 260 aa21.2■□□□□ 0.98
ATPAF1-213ENST00000574428 TIMP3P35625 211 aa21.2■□□□□ 0.98
ATPAF1-213ENST00000574428 MAP2K4P45985 399 aa21.2■□□□□ 0.98
ATPAF1-213ENST00000574428 OR3A2P47893 321 aa21.2■□□□□ 0.98
ATPAF1-213ENST00000574428 HSF2Q03933 536 aa21.2■□□□□ 0.98
ATPAF1-213ENST00000574428 SLC35F2Q8IXU6 374 aa21.2■□□□□ 0.98
ATPAF1-213ENST00000574428 OR6N2Q8NGY6 317 aa21.2■□□□□ 0.98
ATPAF1-213ENST00000574428 MARCH7Q9H992 704 aa21.2■□□□□ 0.98
ATPAF1-213ENST00000574428 CLEC2DQ9UHP7 191 aa21.2■□□□□ 0.98
ATPAF1-213ENST00000574428 PCDHGB1Q9Y5G3 927 aa21.2■□□□□ 0.98
ATPAF1-213ENST00000574428 OR6C65A6NJZ3 312 aa21.19■□□□□ 0.98
ATPAF1-213ENST00000574428 C12orf71A8MTZ7 269 aa21.19■□□□□ 0.98
ATPAF1-213ENST00000574428 TNFSF13O75888 250 aa21.19■□□□□ 0.98
ATPAF1-213ENST00000574428 IGHA1P01876 353 aa21.19■□□□□ 0.98
ATPAF1-213ENST00000574428 ETV1P50549 477 aa21.19■□□□□ 0.98
ATPAF1-213ENST00000574428 ZNF84P51523 738 aa21.19■□□□□ 0.98
ATPAF1-213ENST00000574428 ADAM8P78325 824 aa21.19■□□□□ 0.98
ATPAF1-213ENST00000574428 CEACAM16Q2WEN9 425 aa21.19■□□□□ 0.98
ATPAF1-213ENST00000574428 SLC16A9Q7RTY1 509 aa21.19■□□□□ 0.98
ATPAF1-213ENST00000574428 RFLNBQ8N5W9 214 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms