RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 PLP2Q04941 152 aa22.38■■□□□ 1.17
NPLOC4-215ENST00000574095 GLYATQ6IB77 296 aa22.38■■□□□ 1.17
NPLOC4-215ENST00000574095 CPLX4Q7Z7G2 160 aa22.38■■□□□ 1.17
NPLOC4-215ENST00000574095 RNF148Q8N7C7 305 aa22.38■■□□□ 1.17
NPLOC4-215ENST00000574095 ZNF540Q8NDQ6 660 aa22.38■■□□□ 1.17
NPLOC4-215ENST00000574095 UBASH3BQ8TF42 649 aa22.38■■□□□ 1.17
NPLOC4-215ENST00000574095 NABP1Q96AH0 204 aa22.38■■□□□ 1.17
NPLOC4-215ENST00000574095 RBP7Q96R05 134 aa22.38■■□□□ 1.17
NPLOC4-215ENST00000574095 ALG12Q9BV10 488 aa22.38■■□□□ 1.17
NPLOC4-215ENST00000574095 NSRP1Q9H0G5 558 aaKnown RBP22.38■■□□□ 1.17
NPLOC4-215ENST00000574095 KCNN2Q9H2S1 579 aa22.38■■□□□ 1.17
NPLOC4-215ENST00000574095 MS4A5Q9H3V2 200 aa22.38■■□□□ 1.17
NPLOC4-215ENST00000574095 C1orf198Q9H425 327 aa22.38■■□□□ 1.17
NPLOC4-215ENST00000574095 SMURF2Q9HAU4 748 aa22.38■■□□□ 1.17
NPLOC4-215ENST00000574095 ADA2Q9NZK5 511 aa22.38■■□□□ 1.17
NPLOC4-215ENST00000574095 RPS6KA6Q9UK32 745 aa22.38■■□□□ 1.17
NPLOC4-215ENST00000574095 ENPP4Q9Y6X5 453 aa22.38■■□□□ 1.17
NPLOC4-215ENST00000574095 IQCMA0A1B0GVH7 501 aa22.37■■□□□ 1.17
NPLOC4-215ENST00000574095 PTHP01270 115 aa22.37■■□□□ 1.17
NPLOC4-215ENST00000574095 APEHP13798 732 aaKnown RBP22.37■■□□□ 1.17
NPLOC4-215ENST00000574095 APEX1P27695 318 aaKnown RBP22.37■■□□□ 1.17
NPLOC4-215ENST00000574095 GZMKP49863 264 aa22.37■■□□□ 1.17
NPLOC4-215ENST00000574095 GYS2P54840 703 aa22.37■■□□□ 1.17
NPLOC4-215ENST00000574095 TBC1D28Q2M2D7 210 aa22.37■■□□□ 1.17
NPLOC4-215ENST00000574095 CHRFAM7AQ494W8 412 aa22.37■■□□□ 1.17
NPLOC4-215ENST00000574095 RGS7BPQ6MZT1 257 aaPredicted RBP22.37■■□□□ 1.17
NPLOC4-215ENST00000574095 CYP4Z1Q86W10 505 aa22.37■■□□□ 1.17
NPLOC4-215ENST00000574095 ZNF786Q8N393 782 aa22.37■■□□□ 1.17
NPLOC4-215ENST00000574095 CPEB3Q8NE35 698 aaKnown RBP22.37■■□□□ 1.17
NPLOC4-215ENST00000574095 OR1J2Q8NGS2 313 aa22.37■■□□□ 1.17
NPLOC4-215ENST00000574095 MDFIQ99750 246 aa22.37■■□□□ 1.17
NPLOC4-215ENST00000574095 NMNAT1Q9HAN9 279 aaPredicted RBP22.37■■□□□ 1.17
NPLOC4-215ENST00000574095 CCNB1IP1Q9NPC3 277 aa22.37■■□□□ 1.17
NPLOC4-215ENST00000574095 SPAG4Q9NPE6 437 aa22.37■■□□□ 1.17
NPLOC4-215ENST00000574095 MALRD1Q5VYJ5 2156 aa22.36■■□□□ 1.17
NPLOC4-215ENST00000574095 SLC22A23A1A5C7 686 aa22.36■■□□□ 1.17
NPLOC4-215ENST00000574095 GMNCA6NCL1 334 aa22.36■■□□□ 1.17
NPLOC4-215ENST00000574095 CDC42EP2O14613 210 aa22.36■■□□□ 1.17
NPLOC4-215ENST00000574095 MGRN1O60291 552 aa22.36■■□□□ 1.17
NPLOC4-215ENST00000574095 NR2C1P13056 603 aa22.36■■□□□ 1.17
NPLOC4-215ENST00000574095 ZNF32P17041 273 aa22.36■■□□□ 1.17
NPLOC4-215ENST00000574095 GIFP27352 417 aa22.36■■□□□ 1.17
NPLOC4-215ENST00000574095 SLC9A3P48764 834 aa22.36■■□□□ 1.17
NPLOC4-215ENST00000574095 HSF2Q03933 536 aa22.36■■□□□ 1.17
NPLOC4-215ENST00000574095 ALKBH6Q3KRA9 238 aa22.36■■□□□ 1.17
NPLOC4-215ENST00000574095 ANKDD1AQ495B1 522 aa22.36■■□□□ 1.17
NPLOC4-215ENST00000574095 PABPC1L2AQ5JQF8 200 aa22.36■■□□□ 1.17
NPLOC4-215ENST00000574095 THEM4Q5T1C6 240 aa22.36■■□□□ 1.17
NPLOC4-215ENST00000574095 RRM2BQ7LG56 351 aa22.36■■□□□ 1.17
NPLOC4-215ENST00000574095 ZNF519Q8TB69 540 aa22.36■■□□□ 1.17
NPLOC4-215ENST00000574095 A0A1W2PPW3 197 aa22.35■■□□□ 1.17
NPLOC4-215ENST00000574095 CLPTM1O96005 669 aa22.35■■□□□ 1.17
NPLOC4-215ENST00000574095 LCKP06239 509 aa22.35■■□□□ 1.17
NPLOC4-215ENST00000574095 ZNF23P17027 643 aa22.35■■□□□ 1.17
NPLOC4-215ENST00000574095 ERVS71-1P61550 626 aa22.35■■□□□ 1.17
NPLOC4-215ENST00000574095 ERVK-25P63136 954 aa22.35■■□□□ 1.17
NPLOC4-215ENST00000574095 TMPRSS11FQ6ZWK6 438 aa22.35■■□□□ 1.17
NPLOC4-215ENST00000574095 FAM156AQ8NDB6 213 aa22.35■■□□□ 1.17
NPLOC4-215ENST00000574095 SLC7A13Q8TCU3 470 aa22.35■■□□□ 1.17
NPLOC4-215ENST00000574095 MSI2Q96DH6 328 aaKnown RBP22.35■■□□□ 1.17
NPLOC4-215ENST00000574095 LRMDAQ9H2I8 198 aa22.35■■□□□ 1.17
NPLOC4-215ENST00000574095 LRP5LA4QPB2 252 aa22.34■■□□□ 1.17
NPLOC4-215ENST00000574095 A6NIZ1 184 aa22.34■■□□□ 1.17
NPLOC4-215ENST00000574095 SNAP29O95721 258 aa22.34■■□□□ 1.17
NPLOC4-215ENST00000574095 NAT2P11245 290 aa22.34■■□□□ 1.17
NPLOC4-215ENST00000574095 CCNOP22674 350 aa22.34■■□□□ 1.17
NPLOC4-215ENST00000574095 APLNRP35414 380 aa22.34■■□□□ 1.17
NPLOC4-215ENST00000574095 RPL4P36578 427 aaKnown RBP22.34■■□□□ 1.17
NPLOC4-215ENST00000574095 UCP2P55851 309 aa22.34■■□□□ 1.17
NPLOC4-215ENST00000574095 RAP1BP61224 184 aa22.34■■□□□ 1.17
NPLOC4-215ENST00000574095 RAP1AP62834 184 aa22.34■■□□□ 1.17
NPLOC4-215ENST00000574095 FAM205BPQ63HN1 556 aa22.34■■□□□ 1.17
NPLOC4-215ENST00000574095 PODNL1Q6PEZ8 512 aa22.34■■□□□ 1.17
NPLOC4-215ENST00000574095 FAM86B1Q8N7N1 296 aa22.34■■□□□ 1.17
NPLOC4-215ENST00000574095 ICA1LQ8NDH6 482 aa22.34■■□□□ 1.17
NPLOC4-215ENST00000574095 AKR7LQ8NHP1 331 aa22.34■■□□□ 1.17
NPLOC4-215ENST00000574095 FNDC8Q8TC99 324 aa22.34■■□□□ 1.17
NPLOC4-215ENST00000574095 FAM46AQ96IP4 442 aaKnown RBP22.34■■□□□ 1.17
NPLOC4-215ENST00000574095 ANKRD19PQ9H560 264 aa22.34■■□□□ 1.17
NPLOC4-215ENST00000574095 DCAF13Q9NV06 445 aaKnown RBP22.34■■□□□ 1.17
NPLOC4-215ENST00000574095 NDUFAF4Q9P032 175 aa22.34■■□□□ 1.17
NPLOC4-215ENST00000574095 FAM32AQ9Y421 112 aaKnown RBP22.34■■□□□ 1.17
NPLOC4-215ENST00000574095 CUBNO60494 3623 aa22.34■■□□□ 1.17
NPLOC4-215ENST00000574095 LOC100289279A0A1B0GTE1 492 aa22.33■■□□□ 1.17
NPLOC4-215ENST00000574095 H7C1C5 153 aa22.33■■□□□ 1.17
NPLOC4-215ENST00000574095 LMX1BO60663 402 aa22.33■■□□□ 1.17
NPLOC4-215ENST00000574095 HPXP02790 462 aa22.33■■□□□ 1.17
NPLOC4-215ENST00000574095 H1F0P07305 194 aaKnown RBP22.33■■□□□ 1.17
NPLOC4-215ENST00000574095 ZNF26P17031 533 aaPredicted RBP22.33■■□□□ 1.17
NPLOC4-215ENST00000574095 LAP3P28838 519 aa22.33■■□□□ 1.17
NPLOC4-215ENST00000574095 RAD52P43351 418 aa22.33■■□□□ 1.17
NPLOC4-215ENST00000574095 LCN6P62502 163 aa22.33■■□□□ 1.17
NPLOC4-215ENST00000574095 ZBED5Q49AG3 693 aa22.33■■□□□ 1.17
NPLOC4-215ENST00000574095 ELFN2Q5R3F8 820 aa22.33■■□□□ 1.17
NPLOC4-215ENST00000574095 FAM27BQ5VT28 67 aa22.33■■□□□ 1.17
NPLOC4-215ENST00000574095 ARIH2OSQ8N7S6 290 aa22.33■■□□□ 1.17
NPLOC4-215ENST00000574095 SYNPRQ8TBG9 265 aa22.33■■□□□ 1.17
NPLOC4-215ENST00000574095 SOX7Q9BT81 388 aa22.33■■□□□ 1.17
NPLOC4-215ENST00000574095 TAAR3PQ9P1P4 343 aa22.33■■□□□ 1.17
NPLOC4-215ENST00000574095 ADAM18Q9Y3Q7 739 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms