RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 XKRYO14609 159 aa14.13□□□□□ -0.15
NUP88-207ENST00000573584 TSPAN9O75954 239 aa14.13□□□□□ -0.15
NUP88-207ENST00000573584 UTS2O95399 124 aa14.13□□□□□ -0.15
NUP88-207ENST00000573584 RPA2P15927 270 aa14.13□□□□□ -0.15
NUP88-207ENST00000573584 ACTBP60709 375 aa14.13□□□□□ -0.15
NUP88-207ENST00000573584 ACTG1P63261 375 aa14.13□□□□□ -0.15
NUP88-207ENST00000573584 SLC17A1Q14916 467 aa14.13□□□□□ -0.15
NUP88-207ENST00000573584 HSPB2Q16082 182 aa14.13□□□□□ -0.15
NUP88-207ENST00000573584 HSD17B13Q7Z5P4 300 aaPredicted RBP14.13□□□□□ -0.15
NUP88-207ENST00000573584 GPX8Q8TED1 209 aa14.13□□□□□ -0.15
NUP88-207ENST00000573584 OR8B4Q96RC9 309 aa14.13□□□□□ -0.15
NUP88-207ENST00000573584 GAL3ST1Q99999 423 aa14.13□□□□□ -0.15
NUP88-207ENST00000573584 C17orf105B2RV13 164 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 RLN2P04090 185 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 ITGB2P05107 769 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 MPGP29372 298 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 HYAL4Q2M3T9 481 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 TFAP2EQ6VUC0 442 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 TMED4Q7Z7H5 227 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 OR1J4Q8NGS1 313 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 STK35Q8TDR2 534 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 SLC17A5Q9NRA2 495 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 UPB1Q9UBR1 384 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 GPR160Q9UJ42 338 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 SZT2Q5T011 3432 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 RFPL4AA6NLU0 287 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 D6RAR5 112 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 RFPL4AL1F8VTS6 287 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 NSA2O95478 260 aaKnown RBP14.12□□□□□ -0.15
NUP88-207ENST00000573584 RAB3DO95716 219 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 PMS2P2O95744 297 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 IL33O95760 270 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 PNPP00491 289 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 OR4E1P0C645 316 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 HSD17B7P56937 341 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 SSBP1Q04837 148 aaKnown RBP14.12□□□□□ -0.15
NUP88-207ENST00000573584 CCINQ13939 588 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 FAM122CQ6P4D5 195 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 FDX2Q6P4F2 183 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 ZNF627Q7L945 461 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 ZNF321PQ8N8H1 164 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 CCDC107Q8WV48 283 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 NXF5Q9H1B4 397 aaKnown RBP14.12□□□□□ -0.15
NUP88-207ENST00000573584 EPHA6Q9UF33 1036 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 HS3ST3A1Q9Y663 406 aa14.12□□□□□ -0.15
NUP88-207ENST00000573584 H3BUI4 141 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 NUPL2O15504 423 aaKnown RBP14.11□□□□□ -0.15
NUP88-207ENST00000573584 CTHP32929 405 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 TAS2R19P59542 299 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 C1QL3Q5VWW1 255 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 ASPHD2Q6ICH7 369 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 ZNF679Q8IYX0 411 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 C12orf45Q8N5I9 185 aaPredicted RBP14.11□□□□□ -0.15
NUP88-207ENST00000573584 ADAMTS18Q8TE60 1221 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 ASB13Q8WXK3 278 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 SEH1LQ96EE3 360 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 ADOQ96SZ5 270 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 AIFM2Q9BRQ8 373 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 POTEKPQ9BYX7 375 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 C1orf198Q9H425 327 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 B9D1Q9UPM9 204 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 DHDHQ9UQ10 334 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 TMEM82A0PJX8 343 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 ATP6V1G2-DDX39BF2Z307 99 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 LINC01565O15544 149 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 PLGP00747 810 aaPredicted RBP14.11□□□□□ -0.15
NUP88-207ENST00000573584 CTSEP14091 401 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 RABIFP47224 123 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 ZNF273Q14593 569 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 FAM166AQ6J272 317 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 ZNF546Q86UE3 836 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 RELL2Q8NC24 303 aaPredicted RBP14.11□□□□□ -0.15
NUP88-207ENST00000573584 METTL21AQ8WXB1 218 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 LDAHQ9H6V9 325 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 GMEB2Q9UKD1 530 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 M0QYG6 137 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 OR6A2O95222 327 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 HPP00738 406 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 SPARCP09486 303 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 CXCR1P25024 350 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 TMEM225Q6GV28 225 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 TMEM205Q6UW68 189 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 TMEM92Q6UXU6 159 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 CFAP77Q6ZQR2 320 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 RNF128Q8TEB7 428 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 TOE1Q96GM8 510 aaKnown RBP14.11□□□□□ -0.15
NUP88-207ENST00000573584 ADAM19Q9H013 955 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 MTIF3Q9H2K0 278 aaKnown RBP14.11□□□□□ -0.15
NUP88-207ENST00000573584 CKLFQ9UBR5 152 aa14.11□□□□□ -0.15
NUP88-207ENST00000573584 ZNF230Q9UIE0 474 aaPredicted RBP14.11□□□□□ -0.15
NUP88-207ENST00000573584 TMEM184BQ9Y519 407 aaPredicted RBP14.11□□□□□ -0.15
NUP88-207ENST00000573584 TEX30Q5JUR7 227 aa14.1□□□□□ -0.15
NUP88-207ENST00000573584 LY6G6FQ5SQ64 297 aa14.1□□□□□ -0.15
NUP88-207ENST00000573584 GLYATL3Q5SZD4 288 aa14.1□□□□□ -0.15
NUP88-207ENST00000573584 GLT8D1Q68CQ7 371 aa14.1□□□□□ -0.15
NUP88-207ENST00000573584 SLC18B1Q6NT16 456 aa14.1□□□□□ -0.15
NUP88-207ENST00000573584 NDUFAF7Q7L592 441 aa14.1□□□□□ -0.15
NUP88-207ENST00000573584 NUP54Q7Z3B4 507 aa14.1□□□□□ -0.15
NUP88-207ENST00000573584 PRR22Q8IZ63 422 aa14.1□□□□□ -0.15
NUP88-207ENST00000573584 EIF4E3Q8N5X7 224 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms