RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 OR8D4Q8NGM9 314 aa13.19□□□□□ -0.3
RAB40B-203ENST00000570676 TSSK6Q9BXA6 273 aa13.19□□□□□ -0.3
RAB40B-203ENST00000570676 C1QTNF6Q9BXI9 259 aa13.19□□□□□ -0.3
RAB40B-203ENST00000570676 FAIMQ9NVQ4 179 aa13.19□□□□□ -0.3
RAB40B-203ENST00000570676 B3GAT1Q9P2W7 334 aa13.19□□□□□ -0.3
RAB40B-203ENST00000570676 GDF2Q9UK05 429 aaPredicted RBP13.19□□□□□ -0.3
RAB40B-203ENST00000570676 RASD1Q9Y272 281 aa13.19□□□□□ -0.3
RAB40B-203ENST00000570676 MCIDASD6RGH6 385 aa13.18□□□□□ -0.3
RAB40B-203ENST00000570676 F13BP05160 661 aa13.18□□□□□ -0.3
RAB40B-203ENST00000570676 EPHA2P29317 976 aa13.18□□□□□ -0.3
RAB40B-203ENST00000570676 TTKP33981 857 aa13.18□□□□□ -0.3
RAB40B-203ENST00000570676 ACVR1BP36896 505 aa13.18□□□□□ -0.3
RAB40B-203ENST00000570676 TGFBR3Q03167 851 aa13.18□□□□□ -0.3
RAB40B-203ENST00000570676 ZP4Q12836 540 aa13.18□□□□□ -0.3
RAB40B-203ENST00000570676 GINS1Q14691 196 aa13.18□□□□□ -0.3
RAB40B-203ENST00000570676 HIKESHIQ53FT3 197 aa13.18□□□□□ -0.3
RAB40B-203ENST00000570676 C1QTNF12Q5T7M4 302 aa13.18□□□□□ -0.3
RAB40B-203ENST00000570676 NIPAL3Q6P499 406 aa13.18□□□□□ -0.3
RAB40B-203ENST00000570676 SLC22A25Q6T423 547 aa13.18□□□□□ -0.3
RAB40B-203ENST00000570676 LRRC75AQ8NAA5 344 aa13.18□□□□□ -0.3
RAB40B-203ENST00000570676 ZNF555Q8NEP9 628 aa13.18□□□□□ -0.3
RAB40B-203ENST00000570676 OR1K1Q8NGR3 316 aa13.18□□□□□ -0.3
RAB40B-203ENST00000570676 ZNF570Q96NI8 536 aa13.18□□□□□ -0.3
RAB40B-203ENST00000570676 DHRS9Q9BPW9 319 aa13.18□□□□□ -0.3
RAB40B-203ENST00000570676 IFT27Q9BW83 186 aa13.18□□□□□ -0.3
RAB40B-203ENST00000570676 NELFAQ9H3P2 528 aa13.18□□□□□ -0.3
RAB40B-203ENST00000570676 INIPQ9NRY2 104 aa13.18□□□□□ -0.3
RAB40B-203ENST00000570676 FAM118AQ9NWS6 357 aa13.18□□□□□ -0.3
RAB40B-203ENST00000570676 ZNF587BE7ETH6 402 aa13.17□□□□□ -0.3
RAB40B-203ENST00000570676 UPK3AO75631 287 aa13.17□□□□□ -0.3
RAB40B-203ENST00000570676 SERPINI2O75830 405 aa13.17□□□□□ -0.3
RAB40B-203ENST00000570676 ZNF432O94892 652 aa13.17□□□□□ -0.3
RAB40B-203ENST00000570676 PPP1R3DO95685 299 aa13.17□□□□□ -0.3
RAB40B-203ENST00000570676 HSPA13P48723 471 aa13.17□□□□□ -0.3
RAB40B-203ENST00000570676 CTXN1P60606 82 aa13.17□□□□□ -0.3
RAB40B-203ENST00000570676 C1DQ13901 141 aaKnown RBP13.17□□□□□ -0.3
RAB40B-203ENST00000570676 PTGES3Q15185 160 aaKnown RBP13.17□□□□□ -0.3
RAB40B-203ENST00000570676 TBRG1Q3YBR2 411 aa13.17□□□□□ -0.3
RAB40B-203ENST00000570676 AGAP6Q5VW22 663 aa13.17□□□□□ -0.3
RAB40B-203ENST00000570676 TMEM236Q5W0B7 351 aa13.17□□□□□ -0.3
RAB40B-203ENST00000570676 SLC27A4Q6P1M0 643 aa13.17□□□□□ -0.3
RAB40B-203ENST00000570676 DPY19L2P2Q6ZN68 376 aa13.17□□□□□ -0.3
RAB40B-203ENST00000570676 ABHD12BQ7Z5M8 362 aaPredicted RBP13.17□□□□□ -0.3
RAB40B-203ENST00000570676 UEVLDQ8IX04 471 aa13.17□□□□□ -0.3
RAB40B-203ENST00000570676 DHRSXQ8N5I4 330 aa13.17□□□□□ -0.3
RAB40B-203ENST00000570676 IQCF1Q8N6M8 205 aa13.17□□□□□ -0.3
RAB40B-203ENST00000570676 ANKK1Q8NFD2 765 aa13.17□□□□□ -0.3
RAB40B-203ENST00000570676 OR2T33Q8NG76 320 aa13.17□□□□□ -0.3
RAB40B-203ENST00000570676 OR4Q3Q8NH05 313 aa13.17□□□□□ -0.3
RAB40B-203ENST00000570676 CYGBQ8WWM9 190 aa13.17□□□□□ -0.3
RAB40B-203ENST00000570676 OXGR1Q96P68 337 aa13.17□□□□□ -0.3
RAB40B-203ENST00000570676 GPX7Q96SL4 187 aaPredicted RBP13.17□□□□□ -0.3
RAB40B-203ENST00000570676 ADI1Q9BV57 179 aa13.17□□□□□ -0.3
RAB40B-203ENST00000570676 KATNB1Q9BVA0 655 aa13.17□□□□□ -0.3
RAB40B-203ENST00000570676 LINC00470Q9BZP3 86 aa13.17□□□□□ -0.3
RAB40B-203ENST00000570676 CBLN4Q9NTU7 201 aa13.17□□□□□ -0.3
RAB40B-203ENST00000570676 RCE1Q9Y256 329 aa13.17□□□□□ -0.3
RAB40B-203ENST00000570676 NOX1Q9Y5S8 564 aa13.17□□□□□ -0.3
RAB40B-203ENST00000570676 TLN2Q9Y4G6 2542 aa13.17□□□□□ -0.3
RAB40B-203ENST00000570676 ARFGEF3Q5TH69 2177 aa13.16□□□□□ -0.3
RAB40B-203ENST00000570676 LOC102725191A0A1B0GVB3 256 aa13.16□□□□□ -0.3
RAB40B-203ENST00000570676 A0A1W2PRG6 482 aa13.16□□□□□ -0.3
RAB40B-203ENST00000570676 ZAR1LA6NP61 321 aa13.16□□□□□ -0.3
RAB40B-203ENST00000570676 RNF223E7ERA6 249 aa13.16□□□□□ -0.3
RAB40B-203ENST00000570676 ATP6V1G2-DDX39BF2Z307 99 aa13.16□□□□□ -0.3
RAB40B-203ENST00000570676 TRAF3IP2O43734 574 aaPredicted RBP13.16□□□□□ -0.3
RAB40B-203ENST00000570676 CD14P08571 375 aa13.16□□□□□ -0.3
RAB40B-203ENST00000570676 HLA-DOBP13765 273 aa13.16□□□□□ -0.3
RAB40B-203ENST00000570676 ZNF43P17038 809 aa13.16□□□□□ -0.3
RAB40B-203ENST00000570676 GIPRP48546 466 aa13.16□□□□□ -0.3
RAB40B-203ENST00000570676 CLDN17P56750 224 aa13.16□□□□□ -0.3
RAB40B-203ENST00000570676 ERVK-25P63136 954 aa13.16□□□□□ -0.3
RAB40B-203ENST00000570676 CDK5Q00535 292 aa13.16□□□□□ -0.3
RAB40B-203ENST00000570676 POU3F1Q03052 451 aaPredicted RBP13.16□□□□□ -0.3
RAB40B-203ENST00000570676 TOP3AQ13472 1001 aaPredicted RBP13.16□□□□□ -0.3
RAB40B-203ENST00000570676 C6orf52Q5T4I8 152 aa13.16□□□□□ -0.3
RAB40B-203ENST00000570676 PXKQ7Z7A4 578 aa13.16□□□□□ -0.3
RAB40B-203ENST00000570676 ERMAPQ96PL5 475 aaPredicted RBP13.16□□□□□ -0.3
RAB40B-203ENST00000570676 ZNF184Q99676 751 aaPredicted RBP13.16□□□□□ -0.3
RAB40B-203ENST00000570676 CACNG6Q9BXT2 260 aa13.16□□□□□ -0.3
RAB40B-203ENST00000570676 SLC25A19Q9HC21 320 aa13.16□□□□□ -0.3
RAB40B-203ENST00000570676 OBP2BQ9NPH6 170 aa13.16□□□□□ -0.3
RAB40B-203ENST00000570676 POU2F3Q9UKI9 436 aa13.16□□□□□ -0.3
RAB40B-203ENST00000570676 BAIAP2Q9UQB8 552 aa13.16□□□□□ -0.3
RAB40B-203ENST00000570676 IER3IP1Q9Y5U9 82 aa13.16□□□□□ -0.3
RAB40B-203ENST00000570676 CSPG4Q6UVK1 2322 aa13.16□□□□□ -0.3
RAB40B-203ENST00000570676 ARPC4-TTLL3A0A0A6YYG9 625 aa13.15□□□□□ -0.3
RAB40B-203ENST00000570676 IGHV1-18A0A0C4DH31 117 aa13.15□□□□□ -0.3
RAB40B-203ENST00000570676 LOC100130705A0A1B0GUX0 176 aa13.15□□□□□ -0.3
RAB40B-203ENST00000570676 OR6C65A6NJZ3 312 aa13.15□□□□□ -0.3
RAB40B-203ENST00000570676 BHLHE40O14503 412 aa13.15□□□□□ -0.3
RAB40B-203ENST00000570676 SLC16A6O15403 523 aa13.15□□□□□ -0.3
RAB40B-203ENST00000570676 WNT11O96014 354 aa13.15□□□□□ -0.3
RAB40B-203ENST00000570676 GRK5P34947 590 aa13.15□□□□□ -0.3
RAB40B-203ENST00000570676 CAPGP40121 348 aa13.15□□□□□ -0.3
RAB40B-203ENST00000570676 DAP3P51398 398 aaKnown RBP13.15□□□□□ -0.3
RAB40B-203ENST00000570676 RPS6KA3P51812 740 aa13.15□□□□□ -0.3
RAB40B-203ENST00000570676 ADARB1P78563 741 aaKnown RBP13.15□□□□□ -0.3
RAB40B-203ENST00000570676 SLX4IPQ5VYV7 408 aa13.15□□□□□ -0.3
RAB40B-203ENST00000570676 TTC23Q5W5X9 447 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms