RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 GPR160Q9UJ42 338 aa7.33□□□□□ -1.24
CTDNEP1-203ENST00000570385 TRIM33Q9UPN9 1127 aa7.33□□□□□ -1.24
CTDNEP1-203ENST00000570385 WIPI2Q9Y4P8 454 aa7.33□□□□□ -1.24
CTDNEP1-203ENST00000570385 ANK2Q01484 3957 aa7.33□□□□□ -1.24
CTDNEP1-203ENST00000570385 A0A0A6YYJ9 748 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 SLC22A23A1A5C7 686 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 ISPDA4D126 451 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 C5orf49A4QMS7 147 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 CLDN25C9JDP6 229 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 PIP5K1CO60331 668 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 ENTPD5O75356 428 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 DEAF1O75398 565 aaPredicted RBP7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 OR7A10O76100 309 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 PTHP01270 115 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 MT-ND1P03886 318 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 MMP7P09237 267 aaPredicted RBP7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 ACADSP16219 412 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 ZNF32P17041 273 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 STOMP27105 288 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 PCGF2P35227 344 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 WNT5AP41221 380 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 CRYBB2P43320 205 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 OR1E2P47887 323 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 ZNF81P51508 661 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 TAS2R41P59536 307 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 ERVK-25P63136 954 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 LCN2P80188 198 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 CD47Q08722 323 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 PIN1Q13526 163 aaPredicted RBP7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 HIST3H3Q16695 136 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 HFEQ30201 348 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 PCGF3Q3KNV8 242 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 RABL3Q5HYI8 236 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 DPP10Q8N608 796 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 IPCEF1Q8WWN9 437 aaPredicted RBP7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 HDAC2Q92769 488 aaKnown RBP7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 SGTBQ96EQ0 304 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 MPP4Q96JB8 637 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 ATP6V1G3Q96LB4 118 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 SLC6A7Q99884 636 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 GAL3ST1Q99999 423 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 ZNF426Q9BUY5 554 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 MRPL13Q9BYD1 178 aaKnown RBP7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 BCL2L14Q9BZR8 327 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 KCNN2Q9H2S1 579 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 RABEP2Q9H5N1 569 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 EVA1AQ9H8M9 152 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 SAP30LQ9HAJ7 183 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 NPHS2Q9NP85 383 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 INIPQ9NRY2 104 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 DCAF16Q9NXF7 216 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 UGT2A1Q9Y4X1 527 aa7.32□□□□□ -1.24
CTDNEP1-203ENST00000570385 LOC100509620A0A075B734 347 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 A0A0G2JMP0 313 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 A0A0G2JND7 137 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 A0A0X1KG70 313 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 ZSCAN5BA6NJL1 495 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 TRIM77I1YAP6 450 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 FBP2O00757 339 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 SPRY1O43609 319 aaPredicted RBP7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 MGRN1O60291 552 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 SNAP29O95721 258 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 NGFP01138 241 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 IGHV1-46P01743 117 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 IGHV2-5P01817 119 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 MT-ND5P03915 603 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 ANPEPP15144 967 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 FUT4P22083 530 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 GCH1P30793 250 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 GDI2P50395 445 aaKnown RBP7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 GZMMP51124 257 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 DAP3P51398 398 aaKnown RBP7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 HILS1P60008 231 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 PSG4Q00888 419 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 TEKQ02763 1124 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 VMACQ2NL98 169 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 ARMC4Q5T2S8 1044 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 INTS11Q5TA45 600 aaKnown RBP7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 DCAF12L2Q5VW00 463 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 NANOGP8Q6NSW7 305 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 RFPL4BQ6ZWI9 263 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 DPPA2Q7Z7J5 298 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 IGFN1Q86VF2 1251 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 MICU2Q8IYU8 434 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 OR4M2Q8NGB6 313 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 ABHD4Q8TB40 342 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 SLC25A40Q8TBP6 338 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 GEMIN6Q8WXD5 167 aaKnown RBP7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 RAB1CQ92928 201 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 NABP1Q96AH0 204 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 RAB39BQ96DA2 213 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 TIMD4Q96H15 378 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 POM121L2Q96KW2 1035 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 DUX5Q96PT3 197 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 DCLRE1CQ96SD1 692 aaKnown RBP7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 C1QTNF5Q9BXJ0 243 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 SLC19A3Q9BZV2 496 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 OR2J1Q9GZK6 312 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 PCDHAC1Q9H158 963 aa7.31□□□□□ -1.24
CTDNEP1-203ENST00000570385 C1orf198Q9H425 327 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms