RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 TMEM239Q8WW34 195 aa11.83□□□□□ -0.52
GTF3C1-211ENST00000569653 LIPHQ8WWY8 451 aa11.83□□□□□ -0.52
GTF3C1-211ENST00000569653 LZICQ8WZA0 190 aa11.83□□□□□ -0.52
GTF3C1-211ENST00000569653 SGTBQ96EQ0 304 aa11.83□□□□□ -0.52
GTF3C1-211ENST00000569653 LRRC37BQ96QE4 947 aa11.83□□□□□ -0.52
GTF3C1-211ENST00000569653 SPAG4Q9NPE6 437 aa11.83□□□□□ -0.52
GTF3C1-211ENST00000569653 ZNF275Q9NSD4 429 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-211ENST00000569653 MAN2C1Q9NTJ4 1040 aa11.83□□□□□ -0.52
GTF3C1-211ENST00000569653 DUSP13Q9UII6 198 aa11.83□□□□□ -0.52
GTF3C1-211ENST00000569653 A4GNTQ9UNA3 340 aa11.83□□□□□ -0.52
GTF3C1-211ENST00000569653 CXCR6O00574 342 aa11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 ERCC1P07992 297 aaPredicted RBP11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 ZNF250P15622 560 aa11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 ACADSP16219 412 aa11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 RBMXP38159 391 aaKnown RBP11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 WNT5AP41221 380 aa11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 RBM34P42696 430 aaKnown RBP11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 GSK3BP49841 420 aa11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 CLRN1P58418 232 aa11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 TAS2R41P59536 307 aa11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 PSME3P61289 254 aa11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 LMO4P61968 165 aa11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 GALK2Q01415 458 aa11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 GLO1Q04760 184 aa11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 RGS7BPQ6MZT1 257 aaPredicted RBP11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 SLC16A14Q7RTX9 510 aa11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 ZNF101Q8IZC7 436 aa11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 LRRC18Q8N456 261 aa11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 BCAS4Q8TDM0 211 aa11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 TPD52L3Q96J77 140 aa11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 KCTD14Q9BQ13 255 aaPredicted RBP11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 MS4A5Q9H3V2 200 aa11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 INIPQ9NRY2 104 aa11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 ARL8BQ9NVJ2 186 aa11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 TREM2Q9NZC2 230 aa11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 ABCD2Q9UBJ2 740 aa11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 TMEFF2Q9UIK5 374 aaPredicted RBP11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 SPEF1Q9Y4P9 236 aa11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 CACNG2Q9Y698 323 aa11.82□□□□□ -0.52
GTF3C1-211ENST00000569653 LOC100509620A0A075B734 347 aa11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 A0A1W2PPW3 197 aa11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 J3KTA2 159 aa11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 FFAR1O14842 300 aa11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 SNAP29O95721 258 aa11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 IGF2P01344 180 aa11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 HIST1H2ABP04908 130 aa11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 SCG5P05408 212 aa11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 MAKP20794 623 aa11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 ACHEP22303 614 aa11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 GPR6P46095 362 aaPredicted RBP11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 DVL1P1P54792 670 aaPredicted RBP11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 RPS23P62266 143 aaKnown RBP11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 SELENOWP63302 87 aa11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 MRPS34P82930 218 aaKnown RBP11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 PABPC1L2AQ5JQF8 200 aa11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 SLC25A47Q6Q0C1 308 aa11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 RINLQ6ZS11 566 aa11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 HIST3H2AQ7L7L0 130 aa11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 TSEN54Q7Z6J9 526 aaKnown RBP11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 VTCN1Q7Z7D3 282 aa11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 IGFN1Q86VF2 1251 aa11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 CCDC197Q8NCU1 140 aa11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 AKR7LQ8NHP1 331 aa11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 RDH5Q92781 318 aa11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 HIST1H2ACQ93077 130 aa11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 LPAR2Q9HBW0 351 aa11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 TAAR3PQ9P1P4 343 aa11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 RHCGQ9UBD6 479 aa11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 FBXL3Q9UKT7 428 aa11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 HIF3AQ9Y2N7 669 aa11.81□□□□□ -0.52
GTF3C1-211ENST00000569653 A0A1W2PRG6 482 aa11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 C17orf100A8MU93 164 aa11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 CENPBD1B2RD01 187 aa11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 CDC14BO60729 498 aa11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 FARS2O95363 451 aaKnown RBP11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 SAGP10523 405 aaPredicted RBP11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 THRBP10828 461 aa11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 ZNF26P17031 533 aaPredicted RBP11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 ZNF32P17041 273 aa11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 IFNA8P32881 189 aa11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 MPV17P39210 176 aa11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 YAP1P46937 504 aaKnown RBP11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 UCP2P55851 309 aa11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 CCL8P80075 99 aa11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 TOP3AQ13472 1001 aaPredicted RBP11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 SLC36A2Q495M3 483 aa11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 NRN1LQ496H8 165 aa11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 SPRNQ5BIV9 151 aa11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 AVPI1Q5T686 147 aa11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 TMEM53Q6P2H8 277 aa11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 C1orf229Q6ZS94 237 aaPredicted RBP11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 RFPL4BQ6ZWI9 263 aa11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 RBM15BQ8NDT2 890 aaKnown RBP11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 GEMIN6Q8WXD5 167 aaKnown RBP11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 NSMAFQ92636 917 aa11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 FAM162AQ96A26 154 aa11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 POM121L2Q96KW2 1035 aa11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 RNF121Q9H920 327 aa11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 CDH20Q9HBT6 801 aa11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 ADA2Q9NZK5 511 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms