RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 MMP15P51511 669 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 DCAF7P61962 342 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 ELAVL1Q15717 326 aaKnown RBP7.91□□□□□ -1.14
LINC00558-201ENST00000569422 YIF1BQ5BJH7 314 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 UBE2NLQ5JXB2 153 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 FAM199XQ6PEV8 388 aaPredicted RBP7.91□□□□□ -1.14
LINC00558-201ENST00000569422 TCTE3Q8IZS6 198 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 SLC25A45Q8N413 288 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 LRRC75AQ8NAA5 344 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 ANGPTL6Q8NI99 470 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 SLC25A38Q96DW6 304 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 PELOQ9BRX2 385 aaKnown RBP7.91□□□□□ -1.14
LINC00558-201ENST00000569422 SLC19A3Q9BZV2 496 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 WWTR1Q9GZV5 400 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 ELOVL3Q9HB03 270 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 TAS2R5Q9NYW4 299 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 AKAP7Q9P0M2 348 aaPredicted RBP7.91□□□□□ -1.14
LINC00558-201ENST00000569422 OR5V1Q9UGF6 321 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 CAMK2AQ9UQM7 478 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 PCDHGA9Q9Y5G4 932 aaKnown RBP7.91□□□□□ -1.14
LINC00558-201ENST00000569422 DBX1A6NMT0 343 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 B8ZZF3 427 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 AIPO00170 330 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 PDCD5O14737 125 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 DUX1O43812 170 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 C1QBP02746 253 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 HPXP02790 462 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 IGKV3-11P04433 115 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 CDK2P24941 298 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 DCTDP32321 178 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 VEGFCP49767 419 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 FBXW4P57775 412 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 NXPH1P58417 271 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 RNF4P78317 190 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 ADAM8P78325 824 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 ST3GAL2Q16842 350 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 Q499Y3 187 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 CCDC58Q4VC31 144 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 TM4SF20Q53R12 229 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 SLC25A25Q6KCM7 469 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 PLXDC1Q8IUK5 500 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 OR51D1Q8NGF3 324 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 ZFAND1Q8TCF1 268 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 ZNF431Q8TF32 576 aaPredicted RBP7.91□□□□□ -1.14
LINC00558-201ENST00000569422 S100A16Q96FQ6 103 aaKnown RBP7.91□□□□□ -1.14
LINC00558-201ENST00000569422 MAP6Q96JE9 813 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 ZNF285Q96NJ3 590 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 COMMD4Q9H0A8 199 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 DUSP15Q9H1R2 295 aaPredicted RBP7.91□□□□□ -1.14
LINC00558-201ENST00000569422 TMEM185BQ9H7F4 350 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 EVA1AQ9H8M9 152 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 MED12Q93074 2177 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 TMED7-TICAM2A0A0A6YYA0 188 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 BLACEA4D250 179 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 TRIM77I1YAP6 450 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 GPRIN2O60269 458 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 ZNF780AO75290 641 aaPredicted RBP7.9□□□□□ -1.14
LINC00558-201ENST00000569422 QDPRP09417 244 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 DHPSP49366 369 aaPredicted RBP7.9□□□□□ -1.14
LINC00558-201ENST00000569422 GPLD1P80108 840 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 FOXO1Q12778 655 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 GLB1L2Q8IW92 636 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 FAM71CQ8NEG0 241 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 OR2G2Q8NGZ5 317 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 ZNF417Q8TAU3 575 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 FAM216AQ8WUB2 273 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 KLHL15Q96M94 604 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 ZNF587Q96SQ5 575 aaPredicted RBP7.9□□□□□ -1.14
LINC00558-201ENST00000569422 EPHA6Q9UF33 1036 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 TMED7Q9Y3B3 224 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 SPEF1Q9Y4P9 236 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 ARPC1BO15143 372 aaKnown RBP7.9□□□□□ -1.14
LINC00558-201ENST00000569422 WNT11O96014 354 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 ICAM2P13598 275 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 PGCP20142 388 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 UQCRC1P31930 480 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 WNT5AP41221 380 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 ARRB1P49407 418 aaPredicted RBP7.9□□□□□ -1.14
LINC00558-201ENST00000569422 GALK2Q01415 458 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 FMODQ06828 376 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 DMWDQ09019 674 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 SNTA1Q13424 505 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 LINC00346Q8IVM7 164 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 PRSS35Q8N3Z0 413 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 SLC38A9Q8NBW4 561 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 OR8S1Q8NH09 359 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 RNF166Q96A37 237 aaPredicted RBP7.9□□□□□ -1.14
LINC00558-201ENST00000569422 C8orf44Q96CB5 159 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 MSANTD3Q96H12 275 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 SEC22CQ9BRL7 303 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 LAT2Q9GZY6 243 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 SLA2Q9H6Q3 261 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 UBE2ZQ9H832 354 aaPredicted RBP7.9□□□□□ -1.14
LINC00558-201ENST00000569422 TAS2R10Q9NYW0 307 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 MED11Q9P086 117 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 SLC23A1Q9UHI7 598 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 ING4Q9UNL4 249 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 NUBP2Q9Y5Y2 271 aa7.9□□□□□ -1.14
LINC00558-201ENST00000569422 TCRBV16S1A1N1A0A5B0 115 aa7.89□□□□□ -1.15
LINC00558-201ENST00000569422 FITM1A5D6W6 292 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms