RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 MESTQ5EB52 335 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 ELFN2Q5R3F8 820 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 FAM205BPQ63HN1 556 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 TBPL2Q6SJ96 375 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 TMPRSS11FQ6ZWK6 438 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 SLC16A14Q7RTX9 510 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 RNF113BQ8IZP6 322 aaKnown RBP6.71□□□□□ -1.34
CDH3-209ENST00000569080 ZNF786Q8N393 782 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 CPEB3Q8NE35 698 aaKnown RBP6.71□□□□□ -1.34
CDH3-209ENST00000569080 SLC30A7Q8NEW0 376 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 OR51A7Q8NH64 312 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 NEU4Q8WWR8 484 aaPredicted RBP6.71□□□□□ -1.34
CDH3-209ENST00000569080 MSI2Q96DH6 328 aaKnown RBP6.71□□□□□ -1.34
CDH3-209ENST00000569080 CMTM5Q96DZ9 223 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 C7orf34Q96L11 122 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 GPX7Q96SL4 187 aaPredicted RBP6.71□□□□□ -1.34
CDH3-209ENST00000569080 MDFIQ99750 246 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 FNDC11Q9BVV2 318 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 FAM107BQ9H098 131 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 RAB1BQ9H0U4 201 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 ANKRD19PQ9H560 264 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 NMNAT1Q9HAN9 279 aaPredicted RBP6.71□□□□□ -1.34
CDH3-209ENST00000569080 SIAEQ9HAT2 523 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 DYNLRB1Q9NP97 96 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 SPAG4Q9NPE6 437 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 DCAF13Q9NV06 445 aaKnown RBP6.71□□□□□ -1.34
CDH3-209ENST00000569080 TMEM160Q9NX00 188 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 EGFL7Q9UHF1 273 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 ZNF346Q9UL40 294 aaKnown RBP6.71□□□□□ -1.34
CDH3-209ENST00000569080 FZR1Q9UM11 496 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 ADAM18Q9Y3Q7 739 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 LOC100509620A0A075B734 347 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 TRBV4-1A0A0J9YWV2 114 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 SH3PXD2BA1X283 911 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 EFCAB9A8MZ26 197 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 LYNX1G3V0Z9 82 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 H7C1C5 153 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 GSTA4O15217 222 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 LILRA1O75019 489 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 RP2O75695 350 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 CLPTM1O96005 669 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 HPXP02790 462 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 SCG5P05408 212 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 FAM157BP0CG42 384 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 LYNX1P0DP58 116 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 HSD17B1P14061 328 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 ZNF250P15622 560 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 ZNF32P17041 273 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 IGFBP5P24593 272 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 APEX1P27695 318 aaKnown RBP6.7□□□□□ -1.34
CDH3-209ENST00000569080 IL2RGP31785 369 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 WNT5AP41221 380 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 OMPP47874 163 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 GYS2P54840 703 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 CTXN1P60606 82 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 LCN6P62502 163 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 GALK2Q01415 458 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 ENDOGQ14249 297 aaKnown RBP6.7□□□□□ -1.34
CDH3-209ENST00000569080 SEC23BQ15437 767 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 TRIP10Q15642 601 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 ANKDD1AQ495B1 522 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 PABPC1L2AQ5JQF8 200 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 FAM27BQ5VT28 67 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 TMEM53Q6P2H8 277 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 PODNL1Q6PEZ8 512 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 THSD4Q6ZMP0 1018 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 ZNF730Q6ZMV8 503 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 OAFQ86UD1 273 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 ZNF101Q8IZC7 436 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 LRRC18Q8N456 261 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 RNF148Q8N7C7 305 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 NSMAFQ92636 917 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 FAM162AQ96A26 154 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 FAM46AQ96IP4 442 aaKnown RBP6.7□□□□□ -1.34
CDH3-209ENST00000569080 POM121L2Q96KW2 1035 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 GPA33Q99795 319 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 WNT5BQ9H1J7 359 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 C1orf198Q9H425 327 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 REV1Q9UBZ9 1251 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 CD300AQ9UGN4 299 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 RPS6KA6Q9UK32 745 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 SIGLEC7Q9Y286 467 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 SPEF1Q9Y4P9 236 aa6.7□□□□□ -1.34
CDH3-209ENST00000569080 TANC2Q9HCD6 1990 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 SLC22A23A1A5C7 686 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 LRP5LA4QPB2 252 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 GMNCA6NCL1 334 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 A6NIZ1 184 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 IMPA2O14732 288 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 PTP4A3O75365 173 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 DIRAS1O95057 198 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 H1F0P07305 194 aaKnown RBP6.69□□□□□ -1.34
CDH3-209ENST00000569080 CD14P08571 375 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 CST2P09228 141 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 FAM157CP0CG43 387 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 NAT2P11245 290 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 NR2C1P13056 603 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 APEHP13798 732 aaKnown RBP6.69□□□□□ -1.34
CDH3-209ENST00000569080 CTLA4P16410 223 aa6.69□□□□□ -1.34
CDH3-209ENST00000569080 RHCEP18577 417 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms