RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 ZNF160Q9HCG1 818 aa16.24■□□□□ 0.19
SMPD3-211ENST00000568373 LOXL2Q9Y4K0 774 aa16.24■□□□□ 0.19
SMPD3-211ENST00000568373 V9GY05 133 aa16.24■□□□□ 0.19
SMPD3-211ENST00000568373 CUL9Q8IWT3 2517 aa16.24■□□□□ 0.19
SMPD3-211ENST00000568373 MEIOCA2RUB1 952 aa16.23■□□□□ 0.19
SMPD3-211ENST00000568373 RAF1P04049 648 aa16.23■□□□□ 0.19
SMPD3-211ENST00000568373 SSR4P51571 173 aa16.23■□□□□ 0.19
SMPD3-211ENST00000568373 CCR9P51686 369 aa16.23■□□□□ 0.19
SMPD3-211ENST00000568373 ZNF57Q68EA5 555 aaPredicted RBP16.23■□□□□ 0.19
SMPD3-211ENST00000568373 KRT77Q7Z794 578 aa16.23■□□□□ 0.19
SMPD3-211ENST00000568373 PLCZ1Q86YW0 608 aa16.23■□□□□ 0.19
SMPD3-211ENST00000568373 SLC25A43Q8WUT9 341 aaPredicted RBP16.23■□□□□ 0.19
SMPD3-211ENST00000568373 ADAMTS14Q8WXS8 1223 aa16.23■□□□□ 0.19
SMPD3-211ENST00000568373 ZBTB8AQ96BR9 441 aa16.23■□□□□ 0.19
SMPD3-211ENST00000568373 CDCP1Q9H5V8 836 aa16.23■□□□□ 0.19
SMPD3-211ENST00000568373 TRBV5-7A0A0A0MS05 114 aa16.23■□□□□ 0.19
SMPD3-211ENST00000568373 GPR171O14626 319 aa16.23■□□□□ 0.19
SMPD3-211ENST00000568373 UBL3O95164 117 aa16.23■□□□□ 0.19
SMPD3-211ENST00000568373 IGHEP01854 428 aa16.23■□□□□ 0.19
SMPD3-211ENST00000568373 OPN1LWP04000 364 aa16.23■□□□□ 0.19
SMPD3-211ENST00000568373 AVPR2P30518 371 aa16.23■□□□□ 0.19
SMPD3-211ENST00000568373 NR4A2P43354 598 aa16.23■□□□□ 0.19
SMPD3-211ENST00000568373 ANGPT1Q15389 498 aa16.23■□□□□ 0.19
SMPD3-211ENST00000568373 UBE2NLQ5JXB2 153 aa16.23■□□□□ 0.19
SMPD3-211ENST00000568373 HES5Q5TA89 166 aa16.23■□□□□ 0.19
SMPD3-211ENST00000568373 NHLRC1Q6VVB1 395 aa16.23■□□□□ 0.19
SMPD3-211ENST00000568373 DUSP18Q8NEJ0 188 aa16.23■□□□□ 0.19
SMPD3-211ENST00000568373 OR10AC1Q8NH08 325 aa16.23■□□□□ 0.19
SMPD3-211ENST00000568373 OR52N5Q8NH56 324 aa16.23■□□□□ 0.19
SMPD3-211ENST00000568373 LOXL4Q96JB6 756 aa16.23■□□□□ 0.19
SMPD3-211ENST00000568373 OR5B2Q96R09 309 aa16.23■□□□□ 0.19
SMPD3-211ENST00000568373 RNF121Q9H920 327 aa16.23■□□□□ 0.19
SMPD3-211ENST00000568373 PADI1Q9ULC6 663 aa16.23■□□□□ 0.19
SMPD3-211ENST00000568373 PCDHGA9Q9Y5G4 932 aaKnown RBP16.23■□□□□ 0.19
SMPD3-211ENST00000568373 TRABD2BA6NFA1 517 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 LANCL1O43813 399 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 CD63P08962 238 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 FAM157BP0CG42 384 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 ZNF823P16415 610 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 FKBP2P26885 142 aaKnown RBP16.22■□□□□ 0.19
SMPD3-211ENST00000568373 P2RY4P51582 365 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 RIDAP52758 137 aaKnown RBP16.22■□□□□ 0.19
SMPD3-211ENST00000568373 BIDP55957 195 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 PCK2Q16822 640 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 ODF4Q2M2E3 257 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 PLET1Q6UQ28 207 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 RPS19BP1Q86WX3 136 aaKnown RBP16.22■□□□□ 0.19
SMPD3-211ENST00000568373 DND1Q8IYX4 353 aaKnown RBP16.22■□□□□ 0.19
SMPD3-211ENST00000568373 OR51A4Q8NGJ6 313 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 TMEM106AQ96A25 262 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 COL25A1Q9BXS0 654 aaPredicted RBP16.22■□□□□ 0.19
SMPD3-211ENST00000568373 ANGPTL4Q9BY76 406 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 PCDHGA5Q9Y5G8 931 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 A0A087WZY1 265 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 IGKV1D-43A0A0B4J1Z2 117 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 A0A1W2PNR3 127 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 EEF1E1O43324 174 aaKnown RBP16.22■□□□□ 0.19
SMPD3-211ENST00000568373 KHDRBS3O75525 346 aaKnown RBP16.22■□□□□ 0.19
SMPD3-211ENST00000568373 WNT11O96014 354 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 CCL3P10147 92 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 OR7E24Q6IFN5 339 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 BAIAP2L2Q6UXY1 529 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 LRRTM1Q86UE6 522 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 UEVLDQ8IX04 471 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 PAQR8Q8TEZ7 354 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 THRSPQ92748 146 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 FAM210AQ96ND0 272 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 EMC6Q9BV81 110 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 STRADBQ9C0K7 418 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 SH2D2AQ9NP31 389 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 KLHL13Q9P2N7 655 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 HDGFL3Q9Y3E1 203 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 LRP12Q9Y561 859 aa16.22■□□□□ 0.19
SMPD3-211ENST00000568373 FAM240BA0A1B0GVZ2 78 aa16.21■□□□□ 0.19
SMPD3-211ENST00000568373 PNPP00491 289 aa16.21■□□□□ 0.19
SMPD3-211ENST00000568373 ADRA2CP18825 462 aa16.21■□□□□ 0.19
SMPD3-211ENST00000568373 DPP4P27487 766 aa16.21■□□□□ 0.19
SMPD3-211ENST00000568373 MLF1P58340 268 aa16.21■□□□□ 0.19
SMPD3-211ENST00000568373 PITPNAQ00169 270 aa16.21■□□□□ 0.19
SMPD3-211ENST00000568373 CCDC157Q569K6 752 aa16.21■□□□□ 0.19
SMPD3-211ENST00000568373 ARMC10Q8N2F6 343 aa16.21■□□□□ 0.19
SMPD3-211ENST00000568373 TMEM156Q8N614 296 aa16.21■□□□□ 0.19
SMPD3-211ENST00000568373 MCHR2Q969V1 340 aa16.21■□□□□ 0.19
SMPD3-211ENST00000568373 ZPBPQ9BS86 351 aa16.21■□□□□ 0.19
SMPD3-211ENST00000568373 MRI1Q9BV20 369 aa16.21■□□□□ 0.19
SMPD3-211ENST00000568373 LIN7BQ9HAP6 207 aa16.21■□□□□ 0.19
SMPD3-211ENST00000568373 MED12Q93074 2177 aa16.21■□□□□ 0.18
SMPD3-211ENST00000568373 ARPC4-TTLL3A0A0A6YYG9 625 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 CCNKO75909 580 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 AQP8O94778 261 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 HRGP04196 525 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 SFTPDP35247 375 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 MMP15P51511 669 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 PLA2G2CQ5R387 149 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 HACD4Q5VWC8 232 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 C6orf15Q6UXA7 325 aaPredicted RBP16.2■□□□□ 0.18
SMPD3-211ENST00000568373 ESPNLQ6ZVH7 1005 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 RAB11FIP2Q7L804 512 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 MDGA2Q7Z553 956 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 PPP1R32Q7Z5V6 425 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms