RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 ZCCHC24Q8N2G6 241 aaKnown RBP4.12□□□□□ -1.75
CLK3-219ENST00000567805 ZNF786Q8N393 782 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 LRRC18Q8N456 261 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 FAM156AQ8NDB6 213 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 SLC30A7Q8NEW0 376 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 OR1J2Q8NGS2 313 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 MOSPD2Q8NHP6 518 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 FNDC8Q8TC99 324 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 UBASH3BQ8TF42 649 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 ACOT11Q8WXI4 607 aaPredicted RBP4.12□□□□□ -1.75
CLK3-219ENST00000567805 HDAC2Q92769 488 aaKnown RBP4.12□□□□□ -1.75
CLK3-219ENST00000567805 FOXN4Q96NZ1 517 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 KCTD14Q9BQ13 255 aaPredicted RBP4.12□□□□□ -1.75
CLK3-219ENST00000567805 ALG12Q9BV10 488 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 FNDC11Q9BVV2 318 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 MRPL37Q9BZE1 423 aaKnown RBP4.12□□□□□ -1.75
CLK3-219ENST00000567805 BPESC1Q9GZL8 116 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 NSRP1Q9H0G5 558 aaKnown RBP4.12□□□□□ -1.75
CLK3-219ENST00000567805 MYLK2Q9H1R3 596 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 LRMDAQ9H2I8 198 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 KCNN2Q9H2S1 579 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 TXNIPQ9H3M7 391 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 MS4A5Q9H3V2 200 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 ANKRD19PQ9H560 264 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 RNF121Q9H920 327 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 SIAEQ9HAT2 523 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 SPAG4Q9NPE6 437 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 MAN2C1Q9NTJ4 1040 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 TMEM160Q9NX00 188 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 ABCD2Q9UBJ2 740 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 LPAR3Q9UBY5 353 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 RPS6KA6Q9UK32 745 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 CDC42EP3Q9UKI2 254 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 ADAM21Q9UKJ8 722 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 SNX13Q9Y5W8 968 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 ABCA2Q9BZC7 2435 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 TRAV27A0A087WT01 109 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 A0A087WUU8 490 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 IGHV4-61A0A0C4DH41 118 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 A0A1W2PRQ8 180 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 SH3PXD2BA1X283 911 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 A6NIZ1 184 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 EFCAB9A8MZ26 197 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 J3KTA2 159 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 FFAR1O14842 300 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 SNX3O60493 162 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 LMX1BO60663 402 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 GMNNO75496 209 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 SLC2A10O95528 541 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 STAMBPO95630 424 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 IFNA2P01563 188 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 IGFBP1P08833 259 aaPredicted RBP4.11□□□□□ -1.75
CLK3-219ENST00000567805 MMP7P09237 267 aaPredicted RBP4.11□□□□□ -1.75
CLK3-219ENST00000567805 TACSTD2P09758 323 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 FAM157CP0CG43 387 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 APEHP13798 732 aaKnown RBP4.11□□□□□ -1.75
CLK3-219ENST00000567805 ZNF250P15622 560 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 ZNF23P17027 643 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 RHCEP18577 417 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 MAKP20794 623 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 FUT4P22083 530 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 APLNRP35414 380 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 GUCA1AP43080 201 aaPredicted RBP4.11□□□□□ -1.75
CLK3-219ENST00000567805 RAD52P43351 418 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 YAP1P46937 504 aaKnown RBP4.11□□□□□ -1.75
CLK3-219ENST00000567805 CHN2P52757 468 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 UCP2P55851 309 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 KLF3P57682 345 aaPredicted RBP4.11□□□□□ -1.75
CLK3-219ENST00000567805 SELENOVP59797 346 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 CTXN1P60606 82 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 PSMA6P60900 246 aaKnown RBP4.11□□□□□ -1.75
CLK3-219ENST00000567805 RAP1BP61224 184 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 PSME3P61289 254 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 PCBD1P61457 104 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 RAP1AP62834 184 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 MRPS11P82912 194 aaKnown RBP4.11□□□□□ -1.75
CLK3-219ENST00000567805 HSF2Q03933 536 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 FMODQ06828 376 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 TOP3AQ13472 1001 aaPredicted RBP4.11□□□□□ -1.75
CLK3-219ENST00000567805 RIN1Q13671 783 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 DGCR6Q14129 220 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 MSMPQ1L6U9 139 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 IQCCQ4KMZ1 466 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 FAM27BQ5VT28 67 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 FAM166AQ6J272 317 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 RGS7BPQ6MZT1 257 aaPredicted RBP4.11□□□□□ -1.75
CLK3-219ENST00000567805 PODNL1Q6PEZ8 512 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 SLC25A47Q6Q0C1 308 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 UGT2A3Q6UWM9 527 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 UNQ6126/PRO20091Q6UXV3 157 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 TMPRSS11FQ6ZWK6 438 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 MBOAT2Q6ZWT7 520 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 RRM2BQ7LG56 351 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 CPLX4Q7Z7G2 160 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 LRP11Q86VZ4 500 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 NRMQ8IXM6 262 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 C1orf174Q8IYL3 243 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 ALDH16A1Q8IZ83 802 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 PAQR4Q8N4S7 273 aaPredicted RBP4.11□□□□□ -1.75
CLK3-219ENST00000567805 LRRC75AQ8NAA5 344 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms