RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 RBBP8Q99708 897 aa2.72□□□□□ -1.97
HERPUD1-211ENST00000566550 MICU1Q9BPX6 476 aa2.72□□□□□ -1.97
HERPUD1-211ENST00000566550 APOL2Q9BQE5 337 aa2.72□□□□□ -1.97
HERPUD1-211ENST00000566550 COPS4Q9BT78 406 aa2.72□□□□□ -1.97
HERPUD1-211ENST00000566550 HCAR1Q9BXC0 346 aa2.72□□□□□ -1.97
HERPUD1-211ENST00000566550 ANGPTL4Q9BY76 406 aa2.72□□□□□ -1.97
HERPUD1-211ENST00000566550 SHANK3Q9BYB0 1731 aa2.72□□□□□ -1.97
HERPUD1-211ENST00000566550 NXF3Q9H4D5 531 aaKnown RBP2.72□□□□□ -1.97
HERPUD1-211ENST00000566550 TMEM38AQ9H6F2 299 aa2.72□□□□□ -1.97
HERPUD1-211ENST00000566550 ARMC7Q9H6L4 198 aa2.72□□□□□ -1.97
HERPUD1-211ENST00000566550 KCNIP1Q9NZI2 227 aa2.72□□□□□ -1.97
HERPUD1-211ENST00000566550 MLXQ9UH92 298 aa2.72□□□□□ -1.97
HERPUD1-211ENST00000566550 GNPTGQ9UJJ9 305 aa2.72□□□□□ -1.97
HERPUD1-211ENST00000566550 RARRES3Q9UL19 164 aa2.72□□□□□ -1.97
HERPUD1-211ENST00000566550 GOLT1BQ9Y3E0 138 aa2.72□□□□□ -1.97
HERPUD1-211ENST00000566550 PUS1Q9Y606 427 aaKnown RBP eCLIP2.72□□□□□ -1.97
HERPUD1-211ENST00000566550 ZFYVE16Q7Z3T8 1539 aa2.72□□□□□ -1.97
HERPUD1-211ENST00000566550 RALGAPBQ86X10 1494 aa2.71□□□□□ -1.97
HERPUD1-211ENST00000566550 CDHR2Q9BYE9 1310 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 FHOD3Q2V2M9 1422 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 UTRNP46939 3433 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 TRAV8-7A0A075B6U6 113 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 ZNF816-ZNF321PA0A0X1KG74 233 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 CLEC18AA5D8T8 446 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 MYMKA6NI61 221 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 ZNF705EA8MWA4 302 aaPredicted RBP2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 LOC110117498-PIK3R3F6TDL0 507 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 F8VZ95 297 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 G3V3Y1 287 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 H3BN98 237 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 SULT1C2O00338 296 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 FGF17O60258 216 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 FKBP6O75344 327 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 BRI3O95415 125 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 CATP04040 527 aaKnown RBP2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 DCNP07585 359 aaKnown RBP2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 ZNF250P15622 560 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 CSNK2A2P19784 350 aaPredicted RBP2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 VDAC1P21796 283 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 TEAD1P28347 426 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 CEACAM3P40198 252 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 RPL29P47914 159 aaKnown RBP2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 GSK3BP49841 420 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 SERPINB8P50452 374 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 SSR4P51571 173 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 CLDN6P56747 220 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 LINC01547P58512 204 aaPredicted RBP2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 STXBP1P61764 594 aaKnown RBP2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 VSNL1P62760 191 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 SLC35B1P78383 322 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 FKBP3Q00688 224 aaKnown RBP2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 SP4Q02446 784 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 TLE4Q04727 773 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 PDIA2Q13087 525 aaKnown RBP2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 ABRAXAS2Q15018 415 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 ZBED5Q49AG3 693 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 MARCH8Q5T0T0 291 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 KHDRBS2Q5VWX1 349 aaKnown RBP2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 DUPD1Q68J44 220 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 TIGD3Q6B0B8 471 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 SLC35E4Q6ICL7 350 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 EMBQ6PCB8 327 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 RFWD3Q6PCD5 774 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 PRSS57Q6UWY2 283 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 LINC00336Q6ZUF6 198 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 AHSA2Q719I0 299 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 ABHD13Q7L211 337 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 SSX6Q7RTT6 188 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 ZNF571Q7Z3V5 609 aaPredicted RBP2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 LRRC6Q86X45 466 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 VKORC1L1Q8N0U8 176 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 IQCF1Q8N6M8 205 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 CLEC18CQ8NCF0 446 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 DUSP18Q8NEJ0 188 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 DNAJB3Q8WWF6 145 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 OR8D1Q8WZ84 308 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 SMARCD2Q92925 531 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 C11orf52Q96A22 123 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 DUS3LQ96G46 650 aaKnown RBP2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 PAGE5Q96GU1 130 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 ZFP3Q96NJ6 502 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 SERPINB12Q96P63 405 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 KLHDC3Q9BQ90 382 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 ZNF251Q9BRH9 671 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 DCUN1D5Q9BTE7 237 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 FAIM2Q9BWQ8 316 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 CHRNA10Q9GZZ6 450 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 SYT4Q9H2B2 425 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 C6orf106Q9H6K1 298 aaPredicted RBP2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 UCK1Q9HA47 277 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 SIAEQ9HAT2 523 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 KCNJ16Q9NPI9 418 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 B3GNT2Q9NY97 397 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 IL20Q9NYY1 176 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 LGALS13Q9UHV8 139 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 SAMD4AQ9UPU9 718 aaKnown RBP2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 L3MBTL1Q9Y468 752 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 PDE4DIPQ5VU43 2346 aa2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 LRPPRCP42704 1394 aaKnown RBP2.71□□□□□ -1.98
HERPUD1-211ENST00000566550 NEO1Q92859 1461 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms