RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 CLNS1AP54105 237 aaKnown RBP8.68□□□□□ -1.02
SF3B3-204ENST00000563739 BIDP55957 195 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 DSTNP60981 165 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 TEKQ02763 1124 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 PUDPQ08623 228 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 MELKQ14680 651 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 HIST3H3Q16695 136 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 DMRTA1Q5VZB9 504 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 PIWIL3Q7Z3Z3 882 aaKnown RBP8.68□□□□□ -1.02
SF3B3-204ENST00000563739 ZNF283Q8N7M2 679 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 OR4K5Q8NGD3 323 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 OR6N1Q8NGY5 312 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 SNX33Q8WV41 574 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 MAL2Q969L2 176 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 SLC35B4Q969S0 331 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 NABP1Q96AH0 204 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 NMD3Q96D46 503 aaKnown RBP8.68□□□□□ -1.02
SF3B3-204ENST00000563739 MAELQ96JY0 434 aaKnown RBP8.68□□□□□ -1.02
SF3B3-204ENST00000563739 POM121L2Q96KW2 1035 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 PANX1Q96RD7 426 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 CCT8L2Q96SF2 557 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 SEPHS2Q99611 448 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 CHIAQ9BZP6 476 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 WDR55Q9H6Y2 383 aaPredicted RBP8.68□□□□□ -1.02
SF3B3-204ENST00000563739 MARCH7Q9H992 704 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 BCL2L10Q9HD36 194 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 MRPL39Q9NYK5 338 aaKnown RBP8.68□□□□□ -1.02
SF3B3-204ENST00000563739 GLTPQ9NZD2 209 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 EGFL7Q9UHF1 273 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 FBXL3Q9UKT7 428 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 TRIM33Q9UPN9 1127 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 UGT2A1Q9Y4X1 527 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 GPR45Q9Y5Y3 372 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 SLC22A31A6NKX4 558 aa8.67□□□□□ -1.02
SF3B3-204ENST00000563739 G3V4G9 280 aa8.67□□□□□ -1.02
SF3B3-204ENST00000563739 DHHO43323 396 aa8.67□□□□□ -1.02
SF3B3-204ENST00000563739 ICMTO60725 284 aa8.67□□□□□ -1.02
SF3B3-204ENST00000563739 SERPINI2O75830 405 aa8.67□□□□□ -1.02
SF3B3-204ENST00000563739 CLPXO76031 633 aa8.67□□□□□ -1.02
SF3B3-204ENST00000563739 FAM107AO95990 144 aa8.67□□□□□ -1.02
SF3B3-204ENST00000563739 MT-ND5P03915 603 aa8.67□□□□□ -1.02
SF3B3-204ENST00000563739 ZNF133P52736 654 aaPredicted RBP8.67□□□□□ -1.02
SF3B3-204ENST00000563739 CRISP3P54108 245 aa8.67□□□□□ -1.02
SF3B3-204ENST00000563739 TMEM155Q4W5P6 130 aa8.67□□□□□ -1.02
SF3B3-204ENST00000563739 THEM4Q5T1C6 240 aa8.67□□□□□ -1.02
SF3B3-204ENST00000563739 BRICD5Q6PL45 260 aa8.67□□□□□ -1.02
SF3B3-204ENST00000563739 C5orf46Q6UWT4 87 aa8.67□□□□□ -1.02
SF3B3-204ENST00000563739 BRD3OSQ6XYD6 125 aa8.67□□□□□ -1.02
SF3B3-204ENST00000563739 ZNF621Q6ZSS3 439 aa8.67□□□□□ -1.02
SF3B3-204ENST00000563739 PXKQ7Z7A4 578 aa8.67□□□□□ -1.02
SF3B3-204ENST00000563739 LRRC28Q86X40 367 aaPredicted RBP8.67□□□□□ -1.02
SF3B3-204ENST00000563739 MSRB3Q8IXL7 192 aa8.67□□□□□ -1.02
SF3B3-204ENST00000563739 MIER2Q8N344 545 aa8.67□□□□□ -1.02
SF3B3-204ENST00000563739 OR1J1Q8NGS3 322 aa8.67□□□□□ -1.02
SF3B3-204ENST00000563739 SLC25A40Q8TBP6 338 aa8.67□□□□□ -1.02
SF3B3-204ENST00000563739 C10orf82Q8WW14 230 aa8.67□□□□□ -1.02
SF3B3-204ENST00000563739 TIMD4Q96H15 378 aa8.67□□□□□ -1.02
SF3B3-204ENST00000563739 CDH20Q9HBT6 801 aa8.67□□□□□ -1.02
SF3B3-204ENST00000563739 MSL2Q9HCI7 577 aa8.67□□□□□ -1.02
SF3B3-204ENST00000563739 TAS2R5Q9NYW4 299 aa8.67□□□□□ -1.02
SF3B3-204ENST00000563739 NOTCH3Q9UM47 2321 aa8.67□□□□□ -1.02
SF3B3-204ENST00000563739 IGHV2-70DA0A0C4DH43 119 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 A0A0G2JPF8 293 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 CLPSL1A2RUU4 121 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 CEACAM18A8MTB9 384 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 HNRNPCL2B2RXH8 293 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 SRRM5B3KS81 715 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 HNRNPCL3B7ZW38 293 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 M0QZ24 198 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 NDUFAB1O14561 156 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 GPR37O15354 613 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 HNRNPCL1O60812 293 aaKnown RBP8.66□□□□□ -1.02
SF3B3-204ENST00000563739 EDF1O60869 148 aaKnown RBP8.66□□□□□ -1.02
SF3B3-204ENST00000563739 ALX3O95076 343 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 TGDSO95455 350 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 ZCCHC18P0CG32 403 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 HNRNPCL4P0DMR1 293 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 PPIAL4GP0DN37 164 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 DRD4P21917 467 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 ERFP50548 548 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 LARS2Q15031 903 aaKnown RBP8.66□□□□□ -1.02
SF3B3-204ENST00000563739 ALG10BQ5I7T1 473 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 SAMD5Q5TGI4 173 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 MBNL2Q5VZF2 373 aaKnown RBP8.66□□□□□ -1.02
SF3B3-204ENST00000563739 RUSC1-AS1Q66K80 236 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 NXNQ6DKJ4 435 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 FIP1L1Q6UN15 594 aaKnown RBP8.66□□□□□ -1.02
SF3B3-204ENST00000563739 EPGNQ6UW88 154 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 LINC00114Q6XXX2 140 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 NET1Q7Z628 596 aaPredicted RBP8.66□□□□□ -1.02
SF3B3-204ENST00000563739 ICA1LQ8NDH6 482 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 VPS37AQ8NEZ2 397 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 OR52E2Q8NGJ4 325 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 OR6X1Q8NH79 312 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 LINC01006Q8NI28 216 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 KLF14Q8TD94 323 aaPredicted RBP8.66□□□□□ -1.02
SF3B3-204ENST00000563739 ST7LQ8TDW4 575 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 C11orf40Q8WZ69 217 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 OR52B2Q96RD2 323 aa8.66□□□□□ -1.02
SF3B3-204ENST00000563739 OR52E6Q96RD3 313 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms