RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 ARR3P36575 388 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 CAPZA2P47755 286 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 GIPRP48546 466 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 IDH3GP51553 393 aaPredicted RBP7.41□□□□□ -1.22
UBR1-204ENST00000563239 ART1P52961 327 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 CDH11P55287 796 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 RAB1AP62820 205 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 CD47Q08722 323 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 KRR1Q13601 381 aaKnown RBP7.41□□□□□ -1.22
UBR1-204ENST00000563239 GSG1Q2KHT4 349 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 ZNF362Q5T0B9 420 aaPredicted RBP7.41□□□□□ -1.22
UBR1-204ENST00000563239 GPR139Q6DWJ6 353 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 SLC22A25Q6T423 547 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 CD300LDQ6UXZ3 194 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 RASSF6Q6ZTQ3 369 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 HS3ST5Q8IZT8 346 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 AQP11Q8NBQ7 271 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 SMAP2Q8WU79 429 aaPredicted RBP7.41□□□□□ -1.22
UBR1-204ENST00000563239 FBXW5Q969U6 566 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 GTPBP3Q969Y2 492 aaKnown RBP7.41□□□□□ -1.22
UBR1-204ENST00000563239 FBXO17Q96EF6 278 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 DUS3LQ96G46 650 aaKnown RBP7.41□□□□□ -1.22
UBR1-204ENST00000563239 ZNF570Q96NI8 536 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 RBP7Q96R05 134 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 DDOQ99489 341 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 CCL19Q99731 98 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 NIPSNAP1Q9BPW8 284 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 DGCR6LQ9BY27 220 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 SIAEQ9HAT2 523 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 BEX4Q9NWD9 120 aaPredicted RBP7.41□□□□□ -1.22
UBR1-204ENST00000563239 IL20Q9NYY1 176 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.41□□□□□ -1.22
UBR1-204ENST00000563239 DNAJB9Q9UBS3 223 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 REV1Q9UBZ9 1251 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 CDH10Q9Y6N8 788 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 ZNF469Q96JG9 3925 aaPredicted RBP7.41□□□□□ -1.22
UBR1-204ENST00000563239 PLCE1Q9P212 2302 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 ARRDC5A6NEK1 342 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 DCTN6O00399 190 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 MGRN1O60291 552 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 TIPRLO75663 272 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 UBL3O95164 117 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 HIST1H1CP16403 213 aaKnown RBP7.4□□□□□ -1.22
UBR1-204ENST00000563239 HOXB6P17509 224 aaKnown RBP7.4□□□□□ -1.22
UBR1-204ENST00000563239 SLC6A6P31641 620 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 PTDSS1P48651 473 aaKnown RBP7.4□□□□□ -1.22
UBR1-204ENST00000563239 ZNF84P51523 738 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 NKX6-1P78426 367 aaPredicted RBP7.4□□□□□ -1.22
UBR1-204ENST00000563239 NPRL3Q12980 569 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 ENDOGQ14249 297 aaKnown RBP7.4□□□□□ -1.22
UBR1-204ENST00000563239 GK3PQ14409 553 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 RAB39AQ14964 217 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 MSMPQ1L6U9 139 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 MST1LQ2TV78 715 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 FAM27BQ5VT28 67 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 C1orf146Q5VVC0 180 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 C11orf71Q6IPW1 123 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 UGT2A3Q6UWM9 527 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 SPNS3Q6ZMD2 512 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 CCDC121Q6ZUS5 278 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 ADCK1Q86TW2 530 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 DTX2Q86UW9 622 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 LRRC18Q8N456 261 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 OR10G2Q8NGC3 310 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 OR4Q3Q8NH05 313 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 FNDC8Q8TC99 324 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 GIPC3Q8TF64 312 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 PIGTQ969N2 578 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 FOXN4Q96NZ1 517 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 TSSK2Q96PF2 358 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 ERMAPQ96PL5 475 aaPredicted RBP7.4□□□□□ -1.22
UBR1-204ENST00000563239 FEVQ99581 238 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 DHRS9Q9BPW9 319 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 TRAF4Q9BUZ4 470 aaPredicted RBP7.4□□□□□ -1.22
UBR1-204ENST00000563239 IFT27Q9BW83 186 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 SYT4Q9H2B2 425 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 DENND2DQ9H6A0 471 aaPredicted RBP7.4□□□□□ -1.22
UBR1-204ENST00000563239 MOV10Q9HCE1 1003 aaKnown RBP7.4□□□□□ -1.22
UBR1-204ENST00000563239 POLE4Q9NR33 117 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 ZNF701Q9NV72 531 aaPredicted RBP7.4□□□□□ -1.22
UBR1-204ENST00000563239 ARMC1Q9NVT9 282 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 EDARQ9UNE0 448 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 LAMP3Q9UQV4 416 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 ATP23Q9Y6H3 246 aa7.4□□□□□ -1.22
UBR1-204ENST00000563239 PRRC2AP48634 2157 aaKnown RBP7.4□□□□□ -1.23
UBR1-204ENST00000563239 DSCAMO60469 2012 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 IGLV1-36A0A0B4J1U3 117 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 OR6C68A6NDL8 312 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 C3orf80F5H4A9 247 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 EBAG9O00559 213 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 XKRYO14609 159 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 IDH3BO43837 385 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 SLC16A7O60669 478 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 MPZL1O95297 269 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 GPANK1O95872 356 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 CRYAAP02489 173 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 SERPINA5P05154 406 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 CST2P09228 141 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 NR2C1P13056 603 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 ZNF32P17041 273 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms