RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 CCDC107Q8WV48 283 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 SLC35G5Q96KT7 338 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 APOOQ9BUR5 198 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 FBXL4Q9UKA2 621 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 SLC13A4Q9UKG4 626 aa12.75□□□□□ -0.37
GTF3C1-203ENST00000562609 A0A1B0GTI1 187 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 C9JQL5 133 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 MBTPS2O43462 519 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 GLSO94925 669 aaPredicted RBP12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 GYPBP06028 91 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 CSF1P09603 554 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 ERGP11308 486 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 PRKAG1P54619 331 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 GUCA2AQ02747 115 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 ERV3-1Q14264 604 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 NDUFAF7Q7L592 441 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 OR4E2Q8NGC2 313 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 TSACCQ96A04 125 aaPredicted RBP12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 PELI1Q96FA3 418 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 AICDAQ9GZX7 198 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 OR52D1Q9H346 318 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 V9GY05 133 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 A0A0B4J2A0 478 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 OGG1O15527 345 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 KLF4O43474 513 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 PLRG1O43660 514 aaKnown RBP12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 CTNSO60931 367 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 IFNGP01579 166 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 CD3DP04234 171 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 AKAIN1P0CW23 69 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 IL9P15248 144 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 PGAM2P15259 253 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 HIST1H1BP16401 226 aaKnown RBP12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 CD80P33681 288 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 AQP2P41181 271 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 ZNF750Q32MQ0 723 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 UBE3DQ7Z6J8 389 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 FAM24BQ8N5W8 94 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 MIB2Q96AX9 1013 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 AKR1E2Q96JD6 320 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 PRO1933Q9H354 126 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 C1orf198Q9H425 327 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 SHPKQ9UHJ6 478 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 KLF15Q9UIH9 416 aa12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 NOP16Q9Y3C1 178 aaKnown RBP12.74□□□□□ -0.37
GTF3C1-203ENST00000562609 A0A0C4DFX4 3053 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 C4orf51C9J302 202 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 FAM157CP0CG43 387 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 CD34P28906 385 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 PCP4P48539 62 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 RAB28P51157 221 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 PRKXP51817 358 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 PRDX1Q06830 199 aaKnown RBP12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 PLA2G7Q13093 441 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 ZNF239Q16600 458 aaKnown RBP12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 DHRS11Q6UWP2 260 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 TMEM184AQ6ZMB5 413 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 CYB561A3Q8NBI2 242 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 SLC30A7Q8NEW0 376 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 OR1J2Q8NGS2 313 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 OR2G2Q8NGZ5 317 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 C15orf40Q8WUR7 153 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 NUDCD2Q8WVJ2 157 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 IP6K3Q96PC2 410 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 TAAR9Q96RI9 348 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 MESP1Q9BRJ9 268 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 CHST5Q9GZS9 411 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 TAS2R8Q9NYW2 309 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 TBC1D29Q9UFV1 150 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 CACFD1Q9UGQ2 172 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 WDR87Q6ZQQ6 2873 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 TDRD6O60522 2096 aaKnown RBP12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 A0A1W2PS29 197 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 GXYLT2A0PJZ3 443 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 CLDN4O14493 209 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 IFNA2P01563 188 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 HOXB5P09067 269 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 ST6GAL1P15907 406 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 HOXA5P20719 270 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 NME2P22392 152 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 EDNRAP25101 427 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 SIRPAP78324 504 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 FOXK2Q01167 660 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 ARHGAP19Q14CB8 494 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 MICU1Q9BPX6 476 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 SULT4A1Q9BR01 284 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 C2orf88Q9BSF0 95 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 GAR1Q9NY12 217 aaKnown RBP12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 AHSPQ9NZD4 102 aa12.73□□□□□ -0.37
GTF3C1-203ENST00000562609 VPS13AQ96RL7 3174 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 NDUFS4O43181 175 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 TEAD1P28347 426 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 PSMB10P40306 273 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 SSR2P43308 183 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 RAB4BP61018 213 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 GAMTQ14353 236 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 SURF2Q15527 256 aaPredicted RBP12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 DECR1Q16698 335 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 MRM1Q6IN84 353 aaKnown RBP12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 CLEC9AQ6UXN8 241 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms