RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 TPM2P07951 284 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 TOP1P11387 765 aaKnown RBP4.19□□□□□ -1.74
SMG1-204ENST00000561940 GPR6P46095 362 aaPredicted RBP4.19□□□□□ -1.74
SMG1-204ENST00000561940 ACLYP53396 1101 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 FGF8P55075 233 aaPredicted RBP4.19□□□□□ -1.74
SMG1-204ENST00000561940 WNT4P56705 351 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 FZD2Q14332 565 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 PSG5Q15238 335 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 PPP1R7Q15435 360 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 MRPL23Q16540 153 aaKnown RBP4.19□□□□□ -1.74
SMG1-204ENST00000561940 ALKBH6Q3KRA9 238 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 COX15Q7KZN9 410 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 BBS5Q8N3I7 341 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 FAM71E2Q8N5Q1 922 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 SPATA4Q8NEY3 305 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 VN1R2Q8NFZ6 395 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 ELMO1Q92556 727 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 SGK3Q96BR1 496 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 LRRC58Q96CX6 371 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 SLC35E1Q96K37 410 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 PANX1Q96RD7 426 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 SH3GL1Q99961 368 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 CENPKQ9BS16 269 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 FAM192AQ9GZU8 254 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 CLMPQ9H6B4 373 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 ANAPC11Q9NYG5 84 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 LSM7Q9UK45 103 aaKnown RBP4.19□□□□□ -1.74
SMG1-204ENST00000561940 TP53TG5Q9Y2B4 290 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 N6AMT1Q9Y5N5 214 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 C10orf71Q711Q0 1435 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 ARHGEF5Q12774 1597 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 PDE4DIPQ5VU43 2346 aa4.18□□□□□ -1.74
SMG1-204ENST00000561940 XRN1Q8IZH2 1706 aaKnown RBP4.18□□□□□ -1.74
SMG1-204ENST00000561940 PTPN23Q9H3S7 1636 aa4.18□□□□□ -1.74
SMG1-204ENST00000561940 DLGAP1O14490 977 aa4.18□□□□□ -1.74
SMG1-204ENST00000561940 DNALI1O14645 258 aaPredicted RBP4.18□□□□□ -1.74
SMG1-204ENST00000561940 GKN3PP0CG01 181 aa4.18□□□□□ -1.74
SMG1-204ENST00000561940 TROVE2P10155 538 aaKnown RBP eCLIP4.18□□□□□ -1.74
SMG1-204ENST00000561940 GPX6P59796 221 aa4.18□□□□□ -1.74
SMG1-204ENST00000561940 C2orf83Q53S99 150 aa4.18□□□□□ -1.74
SMG1-204ENST00000561940 SLC8B1Q6J4K2 584 aa4.18□□□□□ -1.74
SMG1-204ENST00000561940 HSD17B11Q8NBQ5 300 aa4.18□□□□□ -1.74
SMG1-204ENST00000561940 NPBQ8NG41 125 aa4.18□□□□□ -1.74
SMG1-204ENST00000561940 OR4F15Q8NGB8 312 aa4.18□□□□□ -1.74
SMG1-204ENST00000561940 ELSPBP1Q96BH3 223 aa4.18□□□□□ -1.74
SMG1-204ENST00000561940 NEUROG2Q9H2A3 272 aa4.18□□□□□ -1.74
SMG1-204ENST00000561940 CWH43Q9H720 699 aa4.18□□□□□ -1.74
SMG1-204ENST00000561940 GLRX2Q9NS18 164 aa4.18□□□□□ -1.74
SMG1-204ENST00000561940 ADAM22Q9P0K1 906 aa4.18□□□□□ -1.74
SMG1-204ENST00000561940 NUP50Q9UKX7 468 aa4.18□□□□□ -1.74
SMG1-204ENST00000561940 CNTNAP1P78357 1384 aa4.17□□□□□ -1.74
SMG1-204ENST00000561940 ZNF726A6NNF4 738 aa4.17□□□□□ -1.74
SMG1-204ENST00000561940 MGRN1O60291 552 aa4.17□□□□□ -1.74
SMG1-204ENST00000561940 CSF3P09919 207 aa4.17□□□□□ -1.74
SMG1-204ENST00000561940 RORCP51449 518 aa4.17□□□□□ -1.74
SMG1-204ENST00000561940 MRPS22P82650 360 aaKnown RBP4.17□□□□□ -1.74
SMG1-204ENST00000561940 RCN1Q15293 331 aa4.17□□□□□ -1.74
SMG1-204ENST00000561940 VPS26BQ4G0F5 336 aa4.17□□□□□ -1.74
SMG1-204ENST00000561940 LY6G6FQ5SQ64 297 aa4.17□□□□□ -1.74
SMG1-204ENST00000561940 METAP1DQ6UB28 335 aaPredicted RBP4.17□□□□□ -1.74
SMG1-204ENST00000561940 ZNF621Q6ZSS3 439 aa4.17□□□□□ -1.74
SMG1-204ENST00000561940 GTPBP8Q8N3Z3 284 aaPredicted RBP4.17□□□□□ -1.74
SMG1-204ENST00000561940 TMEM54Q969K7 222 aa4.17□□□□□ -1.74
SMG1-204ENST00000561940 NRTNQ99748 197 aa4.17□□□□□ -1.74
SMG1-204ENST00000561940 VPS37BQ9H9H4 285 aa4.17□□□□□ -1.74
SMG1-204ENST00000561940 SLCO1B3Q9NPD5 702 aa4.17□□□□□ -1.74
SMG1-204ENST00000561940 EXD2Q9NVH0 621 aa4.17□□□□□ -1.74
SMG1-204ENST00000561940 SLC25A37Q9NYZ2 338 aa4.17□□□□□ -1.74
SMG1-204ENST00000561940 NYAP2Q9P242 653 aa4.17□□□□□ -1.74
SMG1-204ENST00000561940 HEBP2Q9Y5Z4 205 aa4.17□□□□□ -1.74
SMG1-204ENST00000561940 CDC42BPGQ6DT37 1551 aa4.17□□□□□ -1.74
SMG1-204ENST00000561940 CEP152O94986 1710 aa4.17□□□□□ -1.74
SMG1-204ENST00000561940 WDR90Q96KV7 1748 aa4.17□□□□□ -1.74
SMG1-204ENST00000561940 TULP4Q9NRJ4 1543 aa4.16□□□□□ -1.74
SMG1-204ENST00000561940 PRRC2AP48634 2157 aaKnown RBP4.16□□□□□ -1.74
SMG1-204ENST00000561940 TECPR2O15040 1411 aa4.16□□□□□ -1.74
SMG1-204ENST00000561940 LSM1O15116 133 aaKnown RBP4.16□□□□□ -1.74
SMG1-204ENST00000561940 SOX15O60248 233 aa4.16□□□□□ -1.74
SMG1-204ENST00000561940 WBP4O75554 376 aaKnown RBP4.16□□□□□ -1.74
SMG1-204ENST00000561940 ANXA5P08758 320 aa4.16□□□□□ -1.74
SMG1-204ENST00000561940 FOLR1P15328 257 aa4.16□□□□□ -1.74
SMG1-204ENST00000561940 CNR1P21554 472 aa4.16□□□□□ -1.74
SMG1-204ENST00000561940 NSG1P42857 185 aa4.16□□□□□ -1.74
SMG1-204ENST00000561940 CDKN1BP46527 198 aa4.16□□□□□ -1.74
SMG1-204ENST00000561940 GBE1Q04446 702 aa4.16□□□□□ -1.74
SMG1-204ENST00000561940 SGCAQ16586 387 aa4.16□□□□□ -1.74
SMG1-204ENST00000561940 VAX1Q5SQQ9 334 aa4.16□□□□□ -1.74
SMG1-204ENST00000561940 CARD17Q5XLA6 110 aa4.16□□□□□ -1.74
SMG1-204ENST00000561940 LINC01555Q8NAE3 123 aa4.16□□□□□ -1.74
SMG1-204ENST00000561940 SDR42E1Q8WUS8 393 aa4.16□□□□□ -1.74
SMG1-204ENST00000561940 TMEM158Q8WZ71 300 aa4.16□□□□□ -1.74
SMG1-204ENST00000561940 STMN2Q93045 179 aa4.16□□□□□ -1.74
SMG1-204ENST00000561940 ATP5SQ99766 215 aa4.16□□□□□ -1.74
SMG1-204ENST00000561940 KRTAP4-3Q9BYR4 195 aa4.16□□□□□ -1.74
SMG1-204ENST00000561940 ILKAPQ9H0C8 392 aaPredicted RBP4.16□□□□□ -1.74
SMG1-204ENST00000561940 FGF20Q9NP95 211 aaPredicted RBP4.16□□□□□ -1.74
SMG1-204ENST00000561940 DEC1Q9P2X7 70 aa4.16□□□□□ -1.74
SMG1-204ENST00000561940 PACSIN2Q9UNF0 486 aaPredicted RBP4.16□□□□□ -1.74
SMG1-204ENST00000561940 PLEKHG2Q9H7P9 1386 aa4.15□□□□□ -1.74
SMG1-204ENST00000561940 LRP4O75096 1905 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms