RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 PLP2Q04941 152 aa13.76□□□□□ -0.21
LMX1B-204ENST00000561065 ZBED5Q49AG3 693 aa13.76□□□□□ -0.21
LMX1B-204ENST00000561065 HIPK1Q86Z02 1210 aa13.76□□□□□ -0.21
LMX1B-204ENST00000561065 LINC00471Q8N535 108 aa13.76□□□□□ -0.21
LMX1B-204ENST00000561065 NOXO1Q8NFA2 376 aa13.76□□□□□ -0.21
LMX1B-204ENST00000561065 OR51A7Q8NH64 312 aa13.76□□□□□ -0.21
LMX1B-204ENST00000561065 MOSPD2Q8NHP6 518 aa13.76□□□□□ -0.21
LMX1B-204ENST00000561065 BCAS4Q8TDM0 211 aa13.76□□□□□ -0.21
LMX1B-204ENST00000561065 ASB10Q8WXI3 467 aa13.76□□□□□ -0.21
LMX1B-204ENST00000561065 SEPHS2Q99611 448 aa13.76□□□□□ -0.21
LMX1B-204ENST00000561065 MRPL37Q9BZE1 423 aaKnown RBP13.76□□□□□ -0.21
LMX1B-204ENST00000561065 RNF121Q9H920 327 aa13.76□□□□□ -0.21
LMX1B-204ENST00000561065 TMEM38BQ9NVV0 291 aa13.76□□□□□ -0.21
LMX1B-204ENST00000561065 ACTR3BQ9P1U1 418 aa13.76□□□□□ -0.21
LMX1B-204ENST00000561065 PRPF19Q9UMS4 504 aaKnown RBP13.76□□□□□ -0.21
LMX1B-204ENST00000561065 MXRA5Q9NR99 2828 aa13.76□□□□□ -0.21
LMX1B-204ENST00000561065 SLC22A23A1A5C7 686 aa13.75□□□□□ -0.21
LMX1B-204ENST00000561065 ARPC2O15144 300 aa13.75□□□□□ -0.21
LMX1B-204ENST00000561065 GADD45GO95257 159 aa13.75□□□□□ -0.21
LMX1B-204ENST00000561065 USF1P22415 310 aaPredicted RBP13.75□□□□□ -0.21
LMX1B-204ENST00000561065 NR4A1P22736 598 aa13.75□□□□□ -0.21
LMX1B-204ENST00000561065 GALK2Q01415 458 aa13.75□□□□□ -0.21
LMX1B-204ENST00000561065 CD47Q08722 323 aa13.75□□□□□ -0.21
LMX1B-204ENST00000561065 GGTLC2Q14390 218 aa13.75□□□□□ -0.21
LMX1B-204ENST00000561065 RAB39AQ14964 217 aa13.75□□□□□ -0.21
LMX1B-204ENST00000561065 HIST3H3Q16695 136 aa13.75□□□□□ -0.21
LMX1B-204ENST00000561065 UNQ6126/PRO20091Q6UXV3 157 aa13.75□□□□□ -0.21
LMX1B-204ENST00000561065 DHFR2Q86XF0 187 aa13.75□□□□□ -0.21
LMX1B-204ENST00000561065 SLC22A24Q8N4F4 322 aa13.75□□□□□ -0.21
LMX1B-204ENST00000561065 SYT14Q8NB59 555 aa13.75□□□□□ -0.21
LMX1B-204ENST00000561065 FAM156AQ8NDB6 213 aa13.75□□□□□ -0.21
LMX1B-204ENST00000561065 OR1J2Q8NGS2 313 aa13.75□□□□□ -0.21
LMX1B-204ENST00000561065 SLC7A13Q8TCU3 470 aa13.75□□□□□ -0.21
LMX1B-204ENST00000561065 MCHR2Q969V1 340 aa13.75□□□□□ -0.21
LMX1B-204ENST00000561065 C7orf34Q96L11 122 aa13.75□□□□□ -0.21
LMX1B-204ENST00000561065 LRGUKQ96M69 825 aa13.75□□□□□ -0.21
LMX1B-204ENST00000561065 FOXN4Q96NZ1 517 aa13.75□□□□□ -0.21
LMX1B-204ENST00000561065 SH3GL3Q99963 347 aa13.75□□□□□ -0.21
LMX1B-204ENST00000561065 PIMREGQ9BSJ6 248 aa13.75□□□□□ -0.21
LMX1B-204ENST00000561065 MRPL13Q9BYD1 178 aaKnown RBP13.75□□□□□ -0.21
LMX1B-204ENST00000561065 BPESC1Q9GZL8 116 aa13.75□□□□□ -0.21
LMX1B-204ENST00000561065 SIAEQ9HAT2 523 aa13.75□□□□□ -0.21
LMX1B-204ENST00000561065 IL1RAPQ9NPH3 570 aa13.75□□□□□ -0.21
LMX1B-204ENST00000561065 MAN2C1Q9NTJ4 1040 aa13.75□□□□□ -0.21
LMX1B-204ENST00000561065 MYEF2Q9P2K5 600 aaKnown RBP13.75□□□□□ -0.21
LMX1B-204ENST00000561065 COL6A5A8TX70 2615 aa13.75□□□□□ -0.21
LMX1B-204ENST00000561065 IQCMA0A1B0GVH7 501 aa13.74□□□□□ -0.21
LMX1B-204ENST00000561065 NDUFS8O00217 210 aa13.74□□□□□ -0.21
LMX1B-204ENST00000561065 TRMUO75648 421 aaKnown RBP13.74□□□□□ -0.21
LMX1B-204ENST00000561065 PRSS23O95084 383 aa13.74□□□□□ -0.21
LMX1B-204ENST00000561065 RPS23P62266 143 aaKnown RBP13.74□□□□□ -0.21
LMX1B-204ENST00000561065 MYBPC1Q00872 1141 aa13.74□□□□□ -0.21
LMX1B-204ENST00000561065 TRIM25Q14258 630 aaKnown RBP13.74□□□□□ -0.21
LMX1B-204ENST00000561065 CARTPTQ16568 116 aa13.74□□□□□ -0.21
LMX1B-204ENST00000561065 ARMC4Q5T2S8 1044 aa13.74□□□□□ -0.21
LMX1B-204ENST00000561065 PODNL1Q6PEZ8 512 aa13.74□□□□□ -0.21
LMX1B-204ENST00000561065 SLC16A14Q7RTX9 510 aa13.74□□□□□ -0.21
LMX1B-204ENST00000561065 ALDH16A1Q8IZ83 802 aa13.74□□□□□ -0.21
LMX1B-204ENST00000561065 PAQR4Q8N4S7 273 aaPredicted RBP13.74□□□□□ -0.21
LMX1B-204ENST00000561065 MRPL24Q96A35 216 aaKnown RBP13.74□□□□□ -0.21
LMX1B-204ENST00000561065 TRIM15Q9C019 465 aa13.74□□□□□ -0.21
LMX1B-204ENST00000561065 TPK1Q9H3S4 243 aa13.74□□□□□ -0.21
LMX1B-204ENST00000561065 FAM53CQ9NYF3 392 aa13.74□□□□□ -0.21
LMX1B-204ENST00000561065 ZNF346Q9UL40 294 aaKnown RBP13.74□□□□□ -0.21
LMX1B-204ENST00000561065 IGKV1D-43A0A0B4J1Z2 117 aa13.73□□□□□ -0.21
LMX1B-204ENST00000561065 LOC390937A0A1W2PQ73 354 aa13.73□□□□□ -0.21
LMX1B-204ENST00000561065 SH3PXD2BA1X283 911 aa13.73□□□□□ -0.21
LMX1B-204ENST00000561065 NDUFB2O95178 105 aa13.73□□□□□ -0.21
LMX1B-204ENST00000561065 IGHMP01871 453 aa13.73□□□□□ -0.21
LMX1B-204ENST00000561065 CD14P08571 375 aa13.73□□□□□ -0.21
LMX1B-204ENST00000561065 MAKP20794 623 aa13.73□□□□□ -0.21
LMX1B-204ENST00000561065 RRM2P31350 389 aa13.73□□□□□ -0.21
LMX1B-204ENST00000561065 SELENOVP59797 346 aa13.73□□□□□ -0.21
LMX1B-204ENST00000561065 PCBD1P61457 104 aa13.73□□□□□ -0.21
LMX1B-204ENST00000561065 SPIBQ01892 262 aa13.73□□□□□ -0.21
LMX1B-204ENST00000561065 FAM98BQ52LJ0 330 aaKnown RBP13.73□□□□□ -0.21
LMX1B-204ENST00000561065 C10orf128Q5T292 105 aa13.73□□□□□ -0.21
LMX1B-204ENST00000561065 GPR139Q6DWJ6 353 aa13.73□□□□□ -0.21
LMX1B-204ENST00000561065 TBPL2Q6SJ96 375 aa13.73□□□□□ -0.21
LMX1B-204ENST00000561065 TRPM8Q7Z2W7 1104 aa13.73□□□□□ -0.21
LMX1B-204ENST00000561065 LRP11Q86VZ4 500 aa13.73□□□□□ -0.21
LMX1B-204ENST00000561065 MEX3DQ86XN8 651 aaKnown RBP13.73□□□□□ -0.21
LMX1B-204ENST00000561065 ARIH2OSQ8N7S6 290 aa13.73□□□□□ -0.21
LMX1B-204ENST00000561065 RBM15BQ8NDT2 890 aaKnown RBP13.73□□□□□ -0.21
LMX1B-204ENST00000561065 OR4K5Q8NGD3 323 aa13.73□□□□□ -0.21
LMX1B-204ENST00000561065 NMD3Q96D46 503 aaKnown RBP13.73□□□□□ -0.21
LMX1B-204ENST00000561065 SYT3Q9BQG1 590 aa13.73□□□□□ -0.21
LMX1B-204ENST00000561065 SOX7Q9BT81 388 aa13.73□□□□□ -0.21
LMX1B-204ENST00000561065 WACQ9BTA9 647 aa13.73□□□□□ -0.21
LMX1B-204ENST00000561065 DYNLRB1Q9NP97 96 aa13.73□□□□□ -0.21
LMX1B-204ENST00000561065 MYOZ1Q9NP98 299 aaPredicted RBP13.73□□□□□ -0.21
LMX1B-204ENST00000561065 CCNB1IP1Q9NPC3 277 aa13.73□□□□□ -0.21
LMX1B-204ENST00000561065 FZR1Q9UM11 496 aa13.73□□□□□ -0.21
LMX1B-204ENST00000561065 SLC2A10O95528 541 aa13.72□□□□□ -0.21
LMX1B-204ENST00000561065 SERPINA5P05154 406 aa13.72□□□□□ -0.21
LMX1B-204ENST00000561065 ADRA2AP08913 450 aa13.72□□□□□ -0.21
LMX1B-204ENST00000561065 DAOP14920 347 aa13.72□□□□□ -0.21
LMX1B-204ENST00000561065 MSX2P35548 267 aaPredicted RBP13.72□□□□□ -0.21
LMX1B-204ENST00000561065 GLRXP35754 106 aa13.72□□□□□ -0.21
LMX1B-204ENST00000561065 RASSF2P50749 326 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms