RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 OAZ3Q9UMX2 235 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 FKBP7Q9Y680 259 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 PDZD2O15018 2839 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 A0A096LPE4 126 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 IGLV1-36A0A0B4J1U3 117 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 A0A1W2PPR1 153 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 A0A1W2PPZ6 126 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 A0A1W2PR80 420 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 OR6C68A6NDL8 312 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 ZNF503-AS2A6NEH8 195 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 H7C1C5 153 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 DCTN6O00399 190 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 SLC16A7O60669 478 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 KHDRBS3O75525 346 aaKnown RBP8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 UBL3O95164 117 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 FARS2O95363 451 aaKnown RBP8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 SOX14O95416 240 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 RENP00797 406 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 HMGN1P05114 100 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 CST2P09228 141 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 MMP7P09237 267 aaPredicted RBP8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 B4GALT1P15291 398 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 CD40P25942 277 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 LAP3P28838 519 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 NOS3P29474 1203 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 PTDSS1P48651 473 aaKnown RBP8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 CRISP1P54107 249 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 LSM6P62312 80 aaKnown RBP8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 LCN6P62502 163 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 ETFDHQ16134 617 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 PGGHGQ32M88 737 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 CLEC12AQ5QGZ9 265 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 ACSM5Q6NUN0 579 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 LEG1Q6P5S2 330 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 DNM1P34Q6PK57 102 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 TMEM108Q6UXF1 575 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 CDC20BQ86Y33 519 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 OR6V1Q8N148 313 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 IL17RDQ8NFM7 739 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 OR52E2Q8NGJ4 325 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 OR4K13Q8NH42 304 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 NANOS1Q8WY41 292 aaKnown RBP8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 STMN2Q93045 179 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 PIK3IP1Q96FE7 263 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 PLPPR2Q96GM1 343 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 RBM4Q9BWF3 364 aaKnown RBP8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 NMNAT2Q9BZQ4 307 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 RACGAP1Q9H0H5 632 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 CLEC4MQ9H2X3 399 aaPredicted RBP8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 PLEKHF2Q9H8W4 249 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 KRT84Q9NSB2 600 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 USE1Q9NZ43 259 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 ENOPH1Q9UHY7 261 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 FBXL3Q9UKT7 428 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 B9D1Q9UPM9 204 aa8.39□□□□□ -1.07
RABGGTA-221ENST00000561055 IGHV1-18A0A0C4DH31 117 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 E9PQ18 207 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 H3BN98 237 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 SEC14L2O76054 403 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 ALPLP05186 524 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 CD3EP07766 207 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 ZNF14P17017 642 aaPredicted RBP8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 MSR1P21757 451 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 CDAP32320 146 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 GUCA1AP43080 201 aaPredicted RBP8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 SLC25A1P53007 311 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 RAB1AP62820 205 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 EFNB1P98172 346 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 HSF2Q03933 536 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 BSPH1Q075Z2 132 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 GINS1Q14691 196 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 PTGES3Q15185 160 aaKnown RBP8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 GSG1Q2KHT4 349 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 SLC36A2Q495M3 483 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 SLC35F1Q5T1Q4 408 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 MDP1Q86V88 176 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 JAZF1Q86VZ6 243 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 GLB1L2Q8IW92 636 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 SLC37A3Q8NCC5 494 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 ICA1LQ8NDH6 482 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 LILRB1Q8NHL6 650 aaPredicted RBP8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 FGFBP3Q8TAT2 258 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 NSMAFQ92636 917 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 SLC38A2Q96QD8 506 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 HS3ST6Q96QI5 342 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 SH3GL3Q99963 347 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 RBM4BQ9BQ04 359 aaKnown RBP8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 GABARAPL3Q9BY60 117 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 POLE4Q9NR33 117 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 KIF17Q9P2E2 1029 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 RNF115Q9Y4L5 304 aa8.38□□□□□ -1.07
RABGGTA-221ENST00000561055 TEP1Q99973 2627 aaKnown RBP8.37□□□□□ -1.07
RABGGTA-221ENST00000561055 ZAR1LA6NP61 321 aa8.37□□□□□ -1.07
RABGGTA-221ENST00000561055 SHISA9B4DS77 424 aa8.37□□□□□ -1.07
RABGGTA-221ENST00000561055 ANKRD65E5RJM6 399 aa8.37□□□□□ -1.07
RABGGTA-221ENST00000561055 SURF4O15260 269 aa8.37□□□□□ -1.07
RABGGTA-221ENST00000561055 IFNGP01579 166 aa8.37□□□□□ -1.07
RABGGTA-221ENST00000561055 HLA-HP01893 362 aa8.37□□□□□ -1.07
RABGGTA-221ENST00000561055 SERPINA5P05154 406 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms