RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 HS3ST5Q8IZT8 346 aa13.47□□□□□ -0.25
RABGGTA-219ENST00000560871 GIPC3Q8TF64 312 aa13.47□□□□□ -0.25
RABGGTA-219ENST00000560871 NANOS1Q8WY41 292 aaKnown RBP13.47□□□□□ -0.25
RABGGTA-219ENST00000560871 NSMAFQ92636 917 aa13.47□□□□□ -0.25
RABGGTA-219ENST00000560871 PIGTQ969N2 578 aa13.47□□□□□ -0.25
RABGGTA-219ENST00000560871 RADILQ96JH8 1075 aa13.47□□□□□ -0.25
RABGGTA-219ENST00000560871 ERMAPQ96PL5 475 aaPredicted RBP13.47□□□□□ -0.25
RABGGTA-219ENST00000560871 RBP7Q96R05 134 aa13.47□□□□□ -0.25
RABGGTA-219ENST00000560871 SNX18Q96RF0 628 aa13.47□□□□□ -0.25
RABGGTA-219ENST00000560871 SH3GL3Q99963 347 aa13.47□□□□□ -0.25
RABGGTA-219ENST00000560871 SYT4Q9H2B2 425 aa13.47□□□□□ -0.25
RABGGTA-219ENST00000560871 DLL4Q9NR61 685 aa13.47□□□□□ -0.25
RABGGTA-219ENST00000560871 ATP6V1G2-DDX39BF2Z307 99 aa13.46□□□□□ -0.25
RABGGTA-219ENST00000560871 MGRN1O60291 552 aa13.46□□□□□ -0.25
RABGGTA-219ENST00000560871 ENTPD5O75356 428 aa13.46□□□□□ -0.25
RABGGTA-219ENST00000560871 DEAF1O75398 565 aaPredicted RBP13.46□□□□□ -0.25
RABGGTA-219ENST00000560871 FARS2O95363 451 aaKnown RBP13.46□□□□□ -0.25
RABGGTA-219ENST00000560871 IGFBP1P08833 259 aaPredicted RBP13.46□□□□□ -0.25
RABGGTA-219ENST00000560871 DANCRP0C864 163 aa13.46□□□□□ -0.25
RABGGTA-219ENST00000560871 CD79AP11912 226 aa13.46□□□□□ -0.25
RABGGTA-219ENST00000560871 CTLA4P16410 223 aa13.46□□□□□ -0.25
RABGGTA-219ENST00000560871 ZNF14P17017 642 aaPredicted RBP13.46□□□□□ -0.25
RABGGTA-219ENST00000560871 GSTM3P21266 225 aa13.46□□□□□ -0.25
RABGGTA-219ENST00000560871 CDAP32320 146 aa13.46□□□□□ -0.25
RABGGTA-219ENST00000560871 CDKN2AP42771 156 aaKnown RBP13.46□□□□□ -0.25
RABGGTA-219ENST00000560871 ACTR3P61158 418 aa13.46□□□□□ -0.25
RABGGTA-219ENST00000560871 NKX6-1P78426 367 aaPredicted RBP13.46□□□□□ -0.25
RABGGTA-219ENST00000560871 NAAAQ02083 359 aa13.46□□□□□ -0.25
RABGGTA-219ENST00000560871 ATP6AP1Q15904 470 aa13.46□□□□□ -0.25
RABGGTA-219ENST00000560871 ETFDHQ16134 617 aa13.46□□□□□ -0.25
RABGGTA-219ENST00000560871 ZNF584Q8IVC4 421 aa13.46□□□□□ -0.25
RABGGTA-219ENST00000560871 LRRC75A-AS1Q8N1F1 130 aa13.46□□□□□ -0.25
RABGGTA-219ENST00000560871 WFDC11Q8NEX6 87 aa13.46□□□□□ -0.25
RABGGTA-219ENST00000560871 OR52L1Q8NGH7 329 aa13.46□□□□□ -0.25
RABGGTA-219ENST00000560871 FBXW5Q969U6 566 aa13.46□□□□□ -0.25
RABGGTA-219ENST00000560871 FEVQ99581 238 aa13.46□□□□□ -0.25
RABGGTA-219ENST00000560871 IFT27Q9BW83 186 aa13.46□□□□□ -0.25
RABGGTA-219ENST00000560871 DENND2DQ9H6A0 471 aaPredicted RBP13.46□□□□□ -0.25
RABGGTA-219ENST00000560871 PDP1Q9P0J1 537 aaPredicted RBP13.46□□□□□ -0.25
RABGGTA-219ENST00000560871 ALPK2Q86TB3 2170 aa13.46□□□□□ -0.25
RABGGTA-219ENST00000560871 E7EQL1 145 aa13.45□□□□□ -0.26
RABGGTA-219ENST00000560871 E2F6O75461 281 aa13.45□□□□□ -0.26
RABGGTA-219ENST00000560871 SOX14O95416 240 aa13.45□□□□□ -0.26
RABGGTA-219ENST00000560871 MMP7P09237 267 aaPredicted RBP13.45□□□□□ -0.26
RABGGTA-219ENST00000560871 PATE4P0C8F1 98 aa13.45□□□□□ -0.26
RABGGTA-219ENST00000560871 FOSL1P15407 271 aa13.45□□□□□ -0.26
RABGGTA-219ENST00000560871 HIST1H1CP16403 213 aaKnown RBP13.45□□□□□ -0.26
RABGGTA-219ENST00000560871 NPR2P20594 1047 aa13.45□□□□□ -0.26
RABGGTA-219ENST00000560871 CALCRP30988 508 aa13.45□□□□□ -0.26
RABGGTA-219ENST00000560871 GIPRP48546 466 aa13.45□□□□□ -0.26
RABGGTA-219ENST00000560871 PTDSS1P48651 473 aaKnown RBP13.45□□□□□ -0.26
RABGGTA-219ENST00000560871 RAB1AP62820 205 aa13.45□□□□□ -0.26
RABGGTA-219ENST00000560871 PIGFQ07326 219 aa13.45□□□□□ -0.26
RABGGTA-219ENST00000560871 COX10Q12887 443 aa13.45□□□□□ -0.26
RABGGTA-219ENST00000560871 NPRL3Q12980 569 aa13.45□□□□□ -0.26
RABGGTA-219ENST00000560871 PGGHGQ32M88 737 aa13.45□□□□□ -0.26
RABGGTA-219ENST00000560871 CLEC12AQ5QGZ9 265 aa13.45□□□□□ -0.26
RABGGTA-219ENST00000560871 SHEQ5VZ18 495 aa13.45□□□□□ -0.26
RABGGTA-219ENST00000560871 SHQ1Q6PI26 577 aaKnown RBP13.45□□□□□ -0.26
RABGGTA-219ENST00000560871 SLC22A25Q6T423 547 aa13.45□□□□□ -0.26
RABGGTA-219ENST00000560871 YTHDF3Q7Z739 585 aaKnown RBP13.45□□□□□ -0.26
RABGGTA-219ENST00000560871 MS4A3Q96HJ5 214 aa13.45□□□□□ -0.26
RABGGTA-219ENST00000560871 SIAEQ9HAT2 523 aa13.45□□□□□ -0.26
RABGGTA-219ENST00000560871 TBC1D23Q9NUY8 699 aa13.45□□□□□ -0.26
RABGGTA-219ENST00000560871 REV1Q9UBZ9 1251 aa13.45□□□□□ -0.26
RABGGTA-219ENST00000560871 MOKQ9UQ07 419 aa13.45□□□□□ -0.26
RABGGTA-219ENST00000560871 AP4S1Q9Y587 144 aa13.45□□□□□ -0.26
RABGGTA-219ENST00000560871 DCTN6O00399 190 aa13.44□□□□□ -0.26
RABGGTA-219ENST00000560871 IDH3BO43837 385 aa13.44□□□□□ -0.26
RABGGTA-219ENST00000560871 SMPD2O60906 423 aa13.44□□□□□ -0.26
RABGGTA-219ENST00000560871 SCG5P05408 212 aa13.44□□□□□ -0.26
RABGGTA-219ENST00000560871 KPNB1Q14974 876 aaKnown RBP13.44□□□□□ -0.26
RABGGTA-219ENST00000560871 SLC36A2Q495M3 483 aa13.44□□□□□ -0.26
RABGGTA-219ENST00000560871 FAM27BQ5VT28 67 aa13.44□□□□□ -0.26
RABGGTA-219ENST00000560871 LEG1Q6P5S2 330 aa13.44□□□□□ -0.26
RABGGTA-219ENST00000560871 SLC16A14Q7RTX9 510 aa13.44□□□□□ -0.26
RABGGTA-219ENST00000560871 DPPA2Q7Z7J5 298 aa13.44□□□□□ -0.26
RABGGTA-219ENST00000560871 LNX2Q8N448 690 aa13.44□□□□□ -0.26
RABGGTA-219ENST00000560871 SDR9C7Q8NEX9 313 aa13.44□□□□□ -0.26
RABGGTA-219ENST00000560871 OR4Q3Q8NH05 313 aa13.44□□□□□ -0.26
RABGGTA-219ENST00000560871 NRBF2Q96F24 287 aa13.44□□□□□ -0.26
RABGGTA-219ENST00000560871 NMNAT3Q96T66 252 aa13.44□□□□□ -0.26
RABGGTA-219ENST00000560871 NUAK2Q9H093 628 aa13.44□□□□□ -0.26
RABGGTA-219ENST00000560871 POLE4Q9NR33 117 aa13.44□□□□□ -0.26
RABGGTA-219ENST00000560871 CISD1Q9NZ45 108 aaKnown RBP13.44□□□□□ -0.26
RABGGTA-219ENST00000560871 IGLV1-36A0A0B4J1U3 117 aa13.43□□□□□ -0.26
RABGGTA-219ENST00000560871 IGHV2OR16-5A0A0B4J2B6 119 aa13.43□□□□□ -0.26
RABGGTA-219ENST00000560871 A0A1W2PPL8 197 aa13.43□□□□□ -0.26
RABGGTA-219ENST00000560871 RAB36O95755 333 aa13.43□□□□□ -0.26
RABGGTA-219ENST00000560871 CRYAAP02489 173 aa13.43□□□□□ -0.26
RABGGTA-219ENST00000560871 SOD3P08294 240 aa13.43□□□□□ -0.26
RABGGTA-219ENST00000560871 GAAP10253 952 aa13.43□□□□□ -0.26
RABGGTA-219ENST00000560871 FCGR1AP12314 374 aa13.43□□□□□ -0.26
RABGGTA-219ENST00000560871 ANXA8P13928 327 aa13.43□□□□□ -0.26
RABGGTA-219ENST00000560871 FASP25445 335 aa13.43□□□□□ -0.26
RABGGTA-219ENST00000560871 LAP3P28838 519 aa13.43□□□□□ -0.26
RABGGTA-219ENST00000560871 ENDOGQ14249 297 aaKnown RBP13.43□□□□□ -0.26
RABGGTA-219ENST00000560871 SLC36A3Q495N2 470 aa13.43□□□□□ -0.26
RABGGTA-219ENST00000560871 ZNF362Q5T0B9 420 aaPredicted RBP13.43□□□□□ -0.26
RABGGTA-219ENST00000560871 DTX2Q86UW9 622 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms