RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 TMPRSS11FQ6ZWK6 438 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 ACOT1Q86TX2 421 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 GJC3Q8NFK1 279 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 ZNF461Q8TAF7 563 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 CACNG8Q8WXS5 425 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 PNPLA2Q96AD5 504 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 TEFMQ96QE5 360 aaKnown RBP6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 LMF1Q96S06 567 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 ZNF382Q96SR6 550 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 CXCL16Q9H2A7 254 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 MRPS30Q9NP92 439 aaKnown RBP6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 SMCO4Q9NRQ5 59 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 RBM22Q9NW64 420 aaKnown RBP eCLIP6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 FXYD6-FXYD2A0A087WZ82 144 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 SMIM28A0A1B0GU29 152 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 JCHAINP01591 159 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 EIF4EP06730 217 aaKnown RBP6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 MGMTP16455 207 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 ZNF14P17017 642 aaPredicted RBP6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 NFYBP25208 207 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 HTR2AP28223 471 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 CD1BP29016 333 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 LHX1P48742 406 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 RPL34P49207 117 aaKnown RBP6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 WNT4P56705 351 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 CXADRP78310 365 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 CCL14Q16627 93 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 SOWAHAQ2M3V2 549 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 SAPCD1Q5SSQ6 148 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 LIPNQ5VXI9 398 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 ASPHD2Q6ICH7 369 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 DOK6Q6PKX4 331 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 TSEN54Q7Z6J9 526 aaKnown RBP6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 ZNF808Q8N4W9 903 aaPredicted RBP6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 OR2L5Q8NG80 312 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 OR1E3Q8WZA6 343 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 S100PBPQ96BU1 408 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 RAB3CQ96E17 227 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 IL4I1Q96RQ9 567 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 FICDQ9BVA6 458 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 SEC11CQ9BY50 192 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 DUSP16Q9BY84 665 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 FXYD6Q9H0Q3 95 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 KCNK12Q9HB15 430 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 POPDC3Q9HBV1 291 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 GALPQ9UBC7 116 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 GAB2Q9UQC2 676 aa6.08□□□□□ -1.44
TSPAN3-209ENST00000560715 MIA3Q5JRA6 1907 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 A0A1W2PPC1 479 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 A0A1W2PRB8 838 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 DUXAA6NLW8 204 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 DUSP11O75319 330 aaKnown RBP6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 SH3BGRLO75368 114 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 FGF19O95750 216 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 CRYABP02511 175 aaKnown RBP6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 MT-ND4P03905 459 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 SLC2A1P11166 492 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 PAX1P15863 534 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 UCP1P25874 307 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 GKP32189 559 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 TAF6P49848 677 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 CRISP1P54107 249 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 ERVPABLB-1P60509 514 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 RAB8AP61006 207 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 PRR20EP86478 221 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 PRR20CP86479 221 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 PRR20DP86480 221 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 PRR20BP86481 221 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 PRR20AP86496 221 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 NHLH2Q02577 135 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 DYRK1AQ13627 763 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 ELAVL3Q14576 367 aaKnown RBP6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 SLC35D3Q5M8T2 416 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 FAM46CQ5VWP2 391 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 RPTNQ6XPR3 784 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 NDUFAF7Q7L592 441 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 TMPRSS12Q86WS5 348 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 STK40Q8N2I9 435 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 KRTCAP2Q8N6L1 136 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 OR11G2Q8NGC1 345 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 OR4Q3Q8NH05 313 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 NEIL3Q8TAT5 605 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 WFDC12Q8WWY7 111 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 HIST1H2BAQ96A08 127 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 FAM46AQ96IP4 442 aaKnown RBP6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 PRR25Q96S07 402 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 NPY6RQ99463 290 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 TSSK6Q9BXA6 273 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 ZNF160Q9HCG1 818 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 MYOZ1Q9NP98 299 aaPredicted RBP6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 NANSQ9NR45 359 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 ACSS1Q9NUB1 689 aaPredicted RBP6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 DNAJC27Q9NZQ0 273 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 OR10H1Q9Y4A9 318 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 NME7Q9Y5B8 376 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 RAI2Q9Y5P3 530 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 SCN10AQ9Y5Y9 1956 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 ANKUB1A6NFN9 424 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 SUV39H1O43463 412 aa6.07□□□□□ -1.44
TSPAN3-209ENST00000560715 UGDHO60701 494 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms