RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 GAL3ST1Q99999 423 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 NKIRAS2Q9NYR9 191 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 SLAMF8Q9P0V8 285 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 EGFL7Q9UHF1 273 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 SCOCQ9UIL1 159 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 RAB26Q9ULW5 256 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 SOX21Q9Y651 276 aaPredicted RBP8.4□□□□□ -1.06
TPM1-225ENST00000560679 PPIAL4EA0A075B759 164 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 A0A096LPI6 279 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 TRBV5-3A0A0A0MS03 114 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 PPIAL4CA0A0B4J2A2 164 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 TCRBV5S2A0A599 114 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 A6NHS1 94 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 PPIAL4DF5H284 164 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 M0R082 166 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 DENRO43583 198 aaKnown RBP8.39□□□□□ -1.07
TPM1-225ENST00000560679 AHSA1O95433 338 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 LYNP07948 512 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 PPIAL4FP0DN26 164 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 UMPSP11172 480 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 ZNF250P15622 560 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 MAKP20794 623 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 S100A3P33764 101 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 RAD52P43351 418 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 RPS5P46782 204 aaKnown RBP8.39□□□□□ -1.07
TPM1-225ENST00000560679 KRTAP10-3P60369 221 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 GALK2Q01415 458 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 SELPLGQ14242 412 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 RAB39AQ14964 217 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 MFSD13AQ14CX5 517 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 PCGF3Q3KNV8 242 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 MTX3Q5HYI7 312 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 TMEM255AQ5JRV8 349 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 CARD17Q5XLA6 110 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 WBP2NLQ6ICG8 309 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 RGS7BPQ6MZT1 257 aaPredicted RBP8.39□□□□□ -1.07
TPM1-225ENST00000560679 TMEM154Q6P9G4 183 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 ZNF813Q6ZN06 617 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 SPATC1Q76KD6 591 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 RNF130Q86XS8 419 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 VRK2Q86Y07 508 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 MSRB3Q8IXL7 192 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 C20orf196Q8IYI0 205 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 ZNF440Q8IYI8 595 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 PACRGLQ8N7B6 248 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 OR8J2Q8NGG1 315 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 FGFBP3Q8TAT2 258 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 ZNF417Q8TAU3 575 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 STK35Q8TDR2 534 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 TESCQ96BS2 214 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 SLC25A36Q96CQ1 311 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 NSMCE2Q96MF7 247 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 CCDC115Q96NT0 180 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 OXGR1Q96P68 337 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 ZNF587Q96SQ5 575 aaPredicted RBP8.39□□□□□ -1.07
TPM1-225ENST00000560679 SH3GL1Q99961 368 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 SLC35A5Q9BS91 424 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 RMND5AQ9H871 391 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.39□□□□□ -1.07
TPM1-225ENST00000560679 PURGQ9UJV8 347 aaKnown RBP8.39□□□□□ -1.07
TPM1-225ENST00000560679 CHST2Q9Y4C5 530 aa8.39□□□□□ -1.07
TPM1-225ENST00000560679 MDFIC2A0A1B0GVS7 189 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 TRAPPC2LH3BP13 241 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 TIPRLO75663 272 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 ALX3O95076 343 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 RAB36O95755 333 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 HPRP00739 348 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 DBIP07108 87 aaKnown RBP8.38□□□□□ -1.07
TPM1-225ENST00000560679 PATE4P0C8F1 98 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 FAM157BP0CG42 384 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 IGHV4-38-2P0DP08 117 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 BMP2P12643 396 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 HLA-DOBP13765 273 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 NCK1P16333 377 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 IL7RP16871 459 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 ZNF26P17031 533 aaPredicted RBP8.38□□□□□ -1.07
TPM1-225ENST00000560679 FASP25445 335 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 RBMXP38159 391 aaKnown RBP8.38□□□□□ -1.07
TPM1-225ENST00000560679 KLF3P57682 345 aaPredicted RBP8.38□□□□□ -1.07
TPM1-225ENST00000560679 MTPNP58546 118 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 RAB1AP62820 205 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 RELBQ01201 579 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 GLO1Q04760 184 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 ZNF154Q13106 437 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 DPY19L1Q2PZI1 675 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 FBLN7Q53RD9 439 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 RUNDC3AQ59EK9 446 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 COX20Q5RI15 118 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 LRIF1Q5T3J3 769 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 JAZF1Q86VZ6 243 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 KIR3DL3Q8N743 410 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 PAPD5Q8NDF8 572 aaKnown RBP8.38□□□□□ -1.07
TPM1-225ENST00000560679 EME1Q96AY2 570 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 ITCHQ96J02 903 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 OR52E6Q96RD3 313 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 GPA33Q99795 319 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 CPPED1Q9BRF8 314 aaPredicted RBP8.38□□□□□ -1.07
TPM1-225ENST00000560679 EMC6Q9BV81 110 aa8.38□□□□□ -1.07
TPM1-225ENST00000560679 PAIP1Q9H074 479 aaKnown RBP8.38□□□□□ -1.07
TPM1-225ENST00000560679 OR51B6Q9H340 312 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms