RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 GABARAPL1Q9H0R8 117 aa13.52□□□□□ -0.25
LYSMD2-204ENST00000560491 B3GNT2Q9NY97 397 aa13.52□□□□□ -0.25
LYSMD2-204ENST00000560491 RAI1Q7Z5J4 1906 aaPredicted RBP13.52□□□□□ -0.25
LYSMD2-204ENST00000560491 ABCA12Q86UK0 2595 aa13.52□□□□□ -0.25
LYSMD2-204ENST00000560491 IGHV1-18A0A0C4DH31 117 aa13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 OR6C68A6NDL8 312 aa13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 DCTN6O00399 190 aa13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 ABCD4O14678 606 aa13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 IDH3BO43837 385 aa13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 SLC16A7O60669 478 aa13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 FARS2O95363 451 aaKnown RBP13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 GPANK1O95872 356 aa13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 SCG5P05408 212 aa13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 CD3EP07766 207 aa13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 CD40P25942 277 aa13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 IDH3GP51553 393 aaPredicted RBP13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 MRPS34P82930 218 aaKnown RBP13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 NPRL3Q12980 569 aa13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 SGCAQ16586 387 aa13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 GSG1Q2KHT4 349 aa13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 PGGHGQ32M88 737 aa13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 OTPQ5XKR4 325 aa13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 ZNF704Q6ZNC4 412 aaPredicted RBP13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 FOXL2NBQ6ZUU3 175 aa13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 C10orf67Q8IYJ2 551 aa13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 SVOPLQ8N434 492 aa13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 LNX2Q8N448 690 aa13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 CYB561A3Q8NBI2 242 aa13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 NANOS1Q8WY41 292 aaKnown RBP13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 NEUROG1Q92886 237 aa13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 SLC38A2Q96QD8 506 aa13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 TMEM204Q9BSN7 226 aa13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 LIME1Q9H400 295 aa13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 PLEKHF2Q9H8W4 249 aa13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 RPRD1BQ9NQG5 326 aaKnown RBP13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 PAPOLBQ9NRJ5 636 aaKnown RBP13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 CRNNQ9UBG3 495 aaPredicted RBP13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 COA3Q9Y2R0 106 aaPredicted RBP13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 RNF115Q9Y4L5 304 aa13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 ITPR2Q14571 2701 aa13.51□□□□□ -0.25
LYSMD2-204ENST00000560491 LRBAP50851 2863 aa13.5□□□□□ -0.25
LYSMD2-204ENST00000560491 KHDRBS3O75525 346 aaKnown RBP13.5□□□□□ -0.25
LYSMD2-204ENST00000560491 UBL3O95164 117 aa13.5□□□□□ -0.25
LYSMD2-204ENST00000560491 RENP00797 406 aa13.5□□□□□ -0.25
LYSMD2-204ENST00000560491 IGKV3-15P01624 115 aa13.5□□□□□ -0.25
LYSMD2-204ENST00000560491 CECR9P0C854 216 aa13.5□□□□□ -0.25
LYSMD2-204ENST00000560491 CBR1P16152 277 aa13.5□□□□□ -0.25
LYSMD2-204ENST00000560491 LAP3P28838 519 aa13.5□□□□□ -0.25
LYSMD2-204ENST00000560491 GIPRP48546 466 aa13.5□□□□□ -0.25
LYSMD2-204ENST00000560491 PTDSS1P48651 473 aaKnown RBP13.5□□□□□ -0.25
LYSMD2-204ENST00000560491 GINS1Q14691 196 aa13.5□□□□□ -0.25
LYSMD2-204ENST00000560491 NRN1LQ496H8 165 aa13.5□□□□□ -0.25
LYSMD2-204ENST00000560491 ZNF362Q5T0B9 420 aaPredicted RBP13.5□□□□□ -0.25
LYSMD2-204ENST00000560491 C1QTNF12Q5T7M4 302 aa13.5□□□□□ -0.25
LYSMD2-204ENST00000560491 SLC16A14Q7RTX9 510 aa13.5□□□□□ -0.25
LYSMD2-204ENST00000560491 CCDC36Q8IYA8 594 aa13.5□□□□□ -0.25
LYSMD2-204ENST00000560491 SLC37A3Q8NCC5 494 aa13.5□□□□□ -0.25
LYSMD2-204ENST00000560491 NPEPL1Q8NDH3 523 aa13.5□□□□□ -0.25
LYSMD2-204ENST00000560491 SNX18Q96RF0 628 aa13.5□□□□□ -0.25
LYSMD2-204ENST00000560491 HEATR1Q9H583 2144 aaKnown RBP13.5□□□□□ -0.25
LYSMD2-204ENST00000560491 UBTD1Q9HAC8 227 aa13.5□□□□□ -0.25
LYSMD2-204ENST00000560491 SIAEQ9HAT2 523 aa13.5□□□□□ -0.25
LYSMD2-204ENST00000560491 SRA1Q9HD15 236 aaKnown RBP13.5□□□□□ -0.25
LYSMD2-204ENST00000560491 EMC7Q9NPA0 242 aa13.5□□□□□ -0.25
LYSMD2-204ENST00000560491 KRT84Q9NSB2 600 aa13.5□□□□□ -0.25
LYSMD2-204ENST00000560491 BAIAP2Q9UQB8 552 aa13.5□□□□□ -0.25
LYSMD2-204ENST00000560491 TACC2O95359 2948 aa13.5□□□□□ -0.25
LYSMD2-204ENST00000560491 CADP27708 2225 aa13.49□□□□□ -0.25
LYSMD2-204ENST00000560491 IGLV1-36A0A0B4J1U3 117 aa13.49□□□□□ -0.25
LYSMD2-204ENST00000560491 MPZL1O95297 269 aa13.49□□□□□ -0.25
LYSMD2-204ENST00000560491 IGLV1-44P01699 117 aa13.49□□□□□ -0.25
LYSMD2-204ENST00000560491 NPR2P20594 1047 aa13.49□□□□□ -0.25
LYSMD2-204ENST00000560491 PTAFRP25105 342 aa13.49□□□□□ -0.25
LYSMD2-204ENST00000560491 CENPAP49450 140 aa13.49□□□□□ -0.25
LYSMD2-204ENST00000560491 RAB1AP62820 205 aa13.49□□□□□ -0.25
LYSMD2-204ENST00000560491 CRMP1Q14194 572 aa13.49□□□□□ -0.25
LYSMD2-204ENST00000560491 TMEM236Q5W0B7 351 aa13.49□□□□□ -0.25
LYSMD2-204ENST00000560491 KDM4DQ6B0I6 523 aa13.49□□□□□ -0.25
LYSMD2-204ENST00000560491 ACSM5Q6NUN0 579 aa13.49□□□□□ -0.25
LYSMD2-204ENST00000560491 SLC27A4Q6P1M0 643 aa13.49□□□□□ -0.25
LYSMD2-204ENST00000560491 UGT2A3Q6UWM9 527 aa13.49□□□□□ -0.25
LYSMD2-204ENST00000560491 OR6V1Q8N148 313 aa13.49□□□□□ -0.25
LYSMD2-204ENST00000560491 LILRB1Q8NHL6 650 aaPredicted RBP13.49□□□□□ -0.25
LYSMD2-204ENST00000560491 DNAJC9Q8WXX5 260 aa13.49□□□□□ -0.25
LYSMD2-204ENST00000560491 STMN2Q93045 179 aa13.49□□□□□ -0.25
LYSMD2-204ENST00000560491 FBXO17Q96EF6 278 aa13.49□□□□□ -0.25
LYSMD2-204ENST00000560491 MS4A3Q96HJ5 214 aa13.49□□□□□ -0.25
LYSMD2-204ENST00000560491 ZNF75AQ96N20 296 aa13.49□□□□□ -0.25
LYSMD2-204ENST00000560491 DDOQ99489 341 aa13.49□□□□□ -0.25
LYSMD2-204ENST00000560491 POLE4Q9NR33 117 aa13.49□□□□□ -0.25
LYSMD2-204ENST00000560491 TMEFF2Q9UIK5 374 aaPredicted RBP13.49□□□□□ -0.25
LYSMD2-204ENST00000560491 B9D1Q9UPM9 204 aa13.49□□□□□ -0.25
LYSMD2-204ENST00000560491 FAM171A2A8MVW0 826 aa13.48□□□□□ -0.25
LYSMD2-204ENST00000560491 SHISA9B4DS77 424 aa13.48□□□□□ -0.25
LYSMD2-204ENST00000560491 ATP6V1G2-DDX39BF2Z307 99 aa13.48□□□□□ -0.25
LYSMD2-204ENST00000560491 RAB36O95755 333 aa13.48□□□□□ -0.25
LYSMD2-204ENST00000560491 MMP7P09237 267 aaPredicted RBP13.48□□□□□ -0.25
LYSMD2-204ENST00000560491 MSR1P21757 451 aa13.48□□□□□ -0.25
LYSMD2-204ENST00000560491 IGFBP5P24593 272 aa13.48□□□□□ -0.25
LYSMD2-204ENST00000560491 CRABP1P29762 137 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms