RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 KCNK17Q96T54 332 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 KATNB1Q9BVA0 655 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 OR52D1Q9H346 318 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 IL20Q9NYY1 176 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 NDUFA13Q9P0J0 144 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 ZNF346Q9UL40 294 aaKnown RBP12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 GMPPBQ9Y5P6 360 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 SMIM31A0A1B0GVY4 71 aa12.25□□□□□ -0.45
PKNOX1-209ENST00000560448 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.25□□□□□ -0.45
PKNOX1-209ENST00000560448 GASTP01350 101 aa12.25□□□□□ -0.45
PKNOX1-209ENST00000560448 ACVR1BP36896 505 aa12.25□□□□□ -0.45
PKNOX1-209ENST00000560448 TOP3AQ13472 1001 aaPredicted RBP12.25□□□□□ -0.45
PKNOX1-209ENST00000560448 TSC22D1Q15714 1073 aa12.25□□□□□ -0.45
PKNOX1-209ENST00000560448 ZNF620Q6ZNG0 422 aa12.25□□□□□ -0.45
PKNOX1-209ENST00000560448 LSRQ86X29 649 aaPredicted RBP12.25□□□□□ -0.45
PKNOX1-209ENST00000560448 WFDC8Q8IUA0 241 aa12.25□□□□□ -0.45
PKNOX1-209ENST00000560448 AQP11Q8NBQ7 271 aa12.25□□□□□ -0.45
PKNOX1-209ENST00000560448 MCHR2Q969V1 340 aa12.25□□□□□ -0.45
PKNOX1-209ENST00000560448 TSPAN32Q96QS1 320 aa12.25□□□□□ -0.45
PKNOX1-209ENST00000560448 WACQ9BTA9 647 aa12.25□□□□□ -0.45
PKNOX1-209ENST00000560448 BAIAP2Q9UQB8 552 aa12.25□□□□□ -0.45
PKNOX1-209ENST00000560448 CDH10Q9Y6N8 788 aa12.25□□□□□ -0.45
PKNOX1-209ENST00000560448 UNC79Q9P2D8 2635 aa12.24□□□□□ -0.45
PKNOX1-209ENST00000560448 QDPRP09417 244 aa12.24□□□□□ -0.45
PKNOX1-209ENST00000560448 OR8G3PP0DMU2 310 aa12.24□□□□□ -0.45
PKNOX1-209ENST00000560448 PRF1P14222 555 aa12.24□□□□□ -0.45
PKNOX1-209ENST00000560448 GGT2P36268 569 aa12.24□□□□□ -0.45
PKNOX1-209ENST00000560448 GUCA1AP43080 201 aaPredicted RBP12.24□□□□□ -0.45
PKNOX1-209ENST00000560448 FOXG1P55316 489 aaPredicted RBP12.24□□□□□ -0.45
PKNOX1-209ENST00000560448 GABARAPL2P60520 117 aa12.24□□□□□ -0.45
PKNOX1-209ENST00000560448 ARF1P84077 181 aaKnown RBP12.24□□□□□ -0.45
PKNOX1-209ENST00000560448 NCMAPQ5T1S8 102 aa12.24□□□□□ -0.45
PKNOX1-209ENST00000560448 C9orf135Q5VTT2 229 aa12.24□□□□□ -0.45
PKNOX1-209ENST00000560448 ADAM5Q6NVV9 412 aa12.24□□□□□ -0.45
PKNOX1-209ENST00000560448 SEZ6L2Q6UXD5 910 aa12.24□□□□□ -0.45
PKNOX1-209ENST00000560448 C22orf34Q6ZV56 151 aa12.24□□□□□ -0.45
PKNOX1-209ENST00000560448 WDR31Q8NA23 367 aa12.24□□□□□ -0.45
PKNOX1-209ENST00000560448 IL17RDQ8NFM7 739 aa12.24□□□□□ -0.45
PKNOX1-209ENST00000560448 GPA33Q99795 319 aa12.24□□□□□ -0.45
PKNOX1-209ENST00000560448 APOL4Q9BPW4 351 aa12.24□□□□□ -0.45
PKNOX1-209ENST00000560448 TMEM204Q9BSN7 226 aa12.24□□□□□ -0.45
PKNOX1-209ENST00000560448 RBM38Q9H0Z9 239 aaKnown RBP12.24□□□□□ -0.45
PKNOX1-209ENST00000560448 ZNF556Q9HAH1 456 aa12.24□□□□□ -0.45
PKNOX1-209ENST00000560448 UTP20O75691 2785 aaKnown RBP12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 SLC1A7O00341 560 aa12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 TMCC2O75069 709 aa12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 UBL3O95164 117 aa12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 CD3EP07766 207 aa12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 CCDC159P0C7I6 412 aa12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 ARR3P36575 388 aa12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 FXYD6P3P58550 94 aa12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 CXCR4P61073 352 aa12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 MRPS34P82930 218 aaKnown RBP12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 IL5RAQ01344 420 aa12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 LGALS3BPQ08380 585 aa12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 KRR1Q13601 381 aaKnown RBP12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 MAD2L1BPQ15013 274 aaPredicted RBP12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 PHYHD1Q5SRE7 291 aa12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 LRFN4Q6PJG9 635 aa12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 DNM1P34Q6PK57 102 aa12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 ZNF773Q6PK81 442 aa12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 ZNF813Q6ZN06 617 aa12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 DEPDC4Q8N2C3 294 aa12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 OR52N5Q8NH56 324 aa12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 CNIH3Q8TBE1 160 aa12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 NINJ1Q92982 152 aa12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 NMD3Q96D46 503 aaKnown RBP12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 PIK3IP1Q96FE7 263 aa12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 PLPPR2Q96GM1 343 aa12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 NELFAQ9H3P2 528 aa12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 TMEM38BQ9NVV0 291 aa12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 CRNNQ9UBG3 495 aaPredicted RBP12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 REV1Q9UBZ9 1251 aa12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 RNF115Q9Y4L5 304 aa12.23□□□□□ -0.45
PKNOX1-209ENST00000560448 PRSS37A4D1T9 235 aa12.22□□□□□ -0.45
PKNOX1-209ENST00000560448 ARHGEF9O43307 516 aa12.22□□□□□ -0.45
PKNOX1-209ENST00000560448 IGKV3-15P01624 115 aa12.22□□□□□ -0.45
PKNOX1-209ENST00000560448 NOS3P29474 1203 aa12.22□□□□□ -0.45
PKNOX1-209ENST00000560448 ERVK-25P63136 954 aa12.22□□□□□ -0.45
PKNOX1-209ENST00000560448 RUNX1T1Q06455 604 aa12.22□□□□□ -0.45
PKNOX1-209ENST00000560448 HIKESHIQ53FT3 197 aa12.22□□□□□ -0.45
PKNOX1-209ENST00000560448 THSD4Q6ZMP0 1018 aa12.22□□□□□ -0.45
PKNOX1-209ENST00000560448 IGFN1Q86VF2 1251 aa12.22□□□□□ -0.45
PKNOX1-209ENST00000560448 MEX3DQ86XN8 651 aaKnown RBP12.22□□□□□ -0.45
PKNOX1-209ENST00000560448 CDC20BQ86Y33 519 aa12.22□□□□□ -0.45
PKNOX1-209ENST00000560448 SLC22A24Q8N4F4 322 aa12.22□□□□□ -0.45
PKNOX1-209ENST00000560448 APH1BQ8WW43 257 aa12.22□□□□□ -0.45
PKNOX1-209ENST00000560448 GTPBP3Q969Y2 492 aaKnown RBP12.22□□□□□ -0.45
PKNOX1-209ENST00000560448 TMIGD2Q96BF3 282 aa12.22□□□□□ -0.45
PKNOX1-209ENST00000560448 LURAP1Q96LR2 239 aa12.22□□□□□ -0.45
PKNOX1-209ENST00000560448 IFT27Q9BW83 186 aa12.22□□□□□ -0.45
PKNOX1-209ENST00000560448 KCNN2Q9H2S1 579 aa12.22□□□□□ -0.45
PKNOX1-209ENST00000560448 PAK1IP1Q9NWT1 392 aaPredicted RBP12.22□□□□□ -0.45
PKNOX1-209ENST00000560448 VSX1Q9NZR4 365 aaPredicted RBP12.22□□□□□ -0.45
PKNOX1-209ENST00000560448 ENOPH1Q9UHY7 261 aa12.22□□□□□ -0.45
PKNOX1-209ENST00000560448 ADAM18Q9Y3Q7 739 aa12.22□□□□□ -0.45
PKNOX1-209ENST00000560448 ALPK2Q86TB3 2170 aa12.22□□□□□ -0.45
PKNOX1-209ENST00000560448 CRYBG3Q68DQ2 2970 aa12.22□□□□□ -0.45
PKNOX1-209ENST00000560448 TEX13CA0A0J9YWL9 993 aa12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 ZAR1LA6NP61 321 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms