RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 MARCH7Q9H992 704 aa13.95□□□□□ -0.18
HERC1-207ENST00000560316 THUMPD1Q9NXG2 353 aaKnown RBP13.95□□□□□ -0.18
HERC1-207ENST00000560316 CLPSL1A2RUU4 121 aa13.94□□□□□ -0.18
HERC1-207ENST00000560316 SRRM5B3KS81 715 aa13.94□□□□□ -0.18
HERC1-207ENST00000560316 OR6A2O95222 327 aa13.94□□□□□ -0.18
HERC1-207ENST00000560316 NGFP01138 241 aa13.94□□□□□ -0.18
HERC1-207ENST00000560316 CD55P08174 381 aa13.94□□□□□ -0.18
HERC1-207ENST00000560316 ZCCHC18P0CG32 403 aa13.94□□□□□ -0.18
HERC1-207ENST00000560316 PGA4P0DJD7 388 aa13.94□□□□□ -0.18
HERC1-207ENST00000560316 PGA3P0DJD8 388 aa13.94□□□□□ -0.18
HERC1-207ENST00000560316 STOMP27105 288 aa13.94□□□□□ -0.18
HERC1-207ENST00000560316 SLC1A6P48664 564 aa13.94□□□□□ -0.18
HERC1-207ENST00000560316 NCALDP61601 193 aa13.94□□□□□ -0.18
HERC1-207ENST00000560316 ESCO2Q56NI9 601 aa13.94□□□□□ -0.18
HERC1-207ENST00000560316 CEP85LQ5SZL2 805 aa13.94□□□□□ -0.18
HERC1-207ENST00000560316 MBNL2Q5VZF2 373 aaKnown RBP13.94□□□□□ -0.18
HERC1-207ENST00000560316 BRD3OSQ6XYD6 125 aa13.94□□□□□ -0.18
HERC1-207ENST00000560316 LRRC28Q86X40 367 aaPredicted RBP13.94□□□□□ -0.18
HERC1-207ENST00000560316 UPRTQ96BW1 309 aa13.94□□□□□ -0.18
HERC1-207ENST00000560316 WFDC6Q9BQY6 131 aa13.94□□□□□ -0.18
HERC1-207ENST00000560316 TMEM27Q9HBJ8 222 aa13.94□□□□□ -0.18
HERC1-207ENST00000560316 A4GALTQ9NPC4 353 aa13.94□□□□□ -0.18
HERC1-207ENST00000560316 CYSLTR2Q9NS75 346 aa13.94□□□□□ -0.18
HERC1-207ENST00000560316 PNPOQ9NVS9 261 aa13.94□□□□□ -0.18
HERC1-207ENST00000560316 TAS2R5Q9NYW4 299 aa13.94□□□□□ -0.18
HERC1-207ENST00000560316 ZDHHC8Q9ULC8 765 aa13.94□□□□□ -0.18
HERC1-207ENST00000560316 TRIM33Q9UPN9 1127 aa13.94□□□□□ -0.18
HERC1-207ENST00000560316 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.94□□□□□ -0.18
HERC1-207ENST00000560316 C5orf49A4QMS7 147 aa13.93□□□□□ -0.18
HERC1-207ENST00000560316 C5orf58C9J3I9 102 aa13.93□□□□□ -0.18
HERC1-207ENST00000560316 SDHDO14521 159 aa13.93□□□□□ -0.18
HERC1-207ENST00000560316 TYROBPO43914 113 aa13.93□□□□□ -0.18
HERC1-207ENST00000560316 TPST2O60704 377 aa13.93□□□□□ -0.18
HERC1-207ENST00000560316 TGDSO95455 350 aa13.93□□□□□ -0.18
HERC1-207ENST00000560316 TSPAN15O95858 294 aa13.93□□□□□ -0.18
HERC1-207ENST00000560316 IL6P05231 212 aa13.93□□□□□ -0.18
HERC1-207ENST00000560316 SELEP16581 610 aa13.93□□□□□ -0.18
HERC1-207ENST00000560316 CDH12P55289 794 aa13.93□□□□□ -0.18
HERC1-207ENST00000560316 BTG1P62324 171 aa13.93□□□□□ -0.18
HERC1-207ENST00000560316 PAX2Q02962 417 aa13.93□□□□□ -0.18
HERC1-207ENST00000560316 RGNQ15493 299 aa13.93□□□□□ -0.18
HERC1-207ENST00000560316 RFPL4BQ6ZWI9 263 aa13.93□□□□□ -0.18
HERC1-207ENST00000560316 HIPK4Q8NE63 616 aa13.93□□□□□ -0.18
HERC1-207ENST00000560316 OR10S1Q8NGN2 331 aa13.93□□□□□ -0.18
HERC1-207ENST00000560316 MCHR2Q969V1 340 aa13.93□□□□□ -0.18
HERC1-207ENST00000560316 POM121L2Q96KW2 1035 aa13.93□□□□□ -0.18
HERC1-207ENST00000560316 ZNF347Q96SE7 839 aa13.93□□□□□ -0.18
HERC1-207ENST00000560316 ARHGDIGQ99819 225 aa13.93□□□□□ -0.18
HERC1-207ENST00000560316 TMEM43Q9BTV4 400 aa13.93□□□□□ -0.18
HERC1-207ENST00000560316 EIF3KQ9UBQ5 218 aaKnown RBP13.93□□□□□ -0.18
HERC1-207ENST00000560316 LGALS13Q9UHV8 139 aa13.93□□□□□ -0.18
HERC1-207ENST00000560316 KLHL21Q9UJP4 597 aa13.93□□□□□ -0.18
HERC1-207ENST00000560316 LOC100509620A0A075B734 347 aa13.92□□□□□ -0.18
HERC1-207ENST00000560316 RNF13O43567 381 aa13.92□□□□□ -0.18
HERC1-207ENST00000560316 NDUFA7O95182 113 aa13.92□□□□□ -0.18
HERC1-207ENST00000560316 MT-ATP6P00846 226 aa13.92□□□□□ -0.18
HERC1-207ENST00000560316 PPIAL4GP0DN37 164 aa13.92□□□□□ -0.18
HERC1-207ENST00000560316 ETS2P15036 469 aa13.92□□□□□ -0.18
HERC1-207ENST00000560316 LIPAP38571 399 aa13.92□□□□□ -0.18
HERC1-207ENST00000560316 DHRS4L2Q6PKH6 230 aa13.92□□□□□ -0.18
HERC1-207ENST00000560316 POU5F2Q8N7G0 328 aa13.92□□□□□ -0.18
HERC1-207ENST00000560316 ZNF283Q8N7M2 679 aa13.92□□□□□ -0.18
HERC1-207ENST00000560316 AKR7LQ8NHP1 331 aa13.92□□□□□ -0.18
HERC1-207ENST00000560316 NFKBIDQ8NI38 313 aa13.92□□□□□ -0.18
HERC1-207ENST00000560316 FAM110DQ8TAY7 271 aaPredicted RBP13.92□□□□□ -0.18
HERC1-207ENST00000560316 ABHD4Q8TB40 342 aa13.92□□□□□ -0.18
HERC1-207ENST00000560316 SIGLEC11Q96RL6 698 aa13.92□□□□□ -0.18
HERC1-207ENST00000560316 CHIAQ9BZP6 476 aa13.92□□□□□ -0.18
HERC1-207ENST00000560316 IL20RAQ9UHF4 553 aa13.92□□□□□ -0.18
HERC1-207ENST00000560316 SLC22A31A6NKX4 558 aa13.91□□□□□ -0.18
HERC1-207ENST00000560316 CEACAM18A8MTB9 384 aa13.91□□□□□ -0.18
HERC1-207ENST00000560316 SLC22A3O75751 556 aa13.91□□□□□ -0.18
HERC1-207ENST00000560316 CH25HO95992 272 aa13.91□□□□□ -0.18
HERC1-207ENST00000560316 ZNF84P51523 738 aa13.91□□□□□ -0.18
HERC1-207ENST00000560316 RGS8P57771 180 aaPredicted RBP13.91□□□□□ -0.18
HERC1-207ENST00000560316 CLRN1P58418 232 aa13.91□□□□□ -0.18
HERC1-207ENST00000560316 PPP1CBP62140 327 aa13.91□□□□□ -0.18
HERC1-207ENST00000560316 TAF9Q16594 264 aa13.91□□□□□ -0.18
HERC1-207ENST00000560316 NRN1LQ496H8 165 aa13.91□□□□□ -0.18
HERC1-207ENST00000560316 C6orf10Q5SRN2 563 aa13.91□□□□□ -0.18
HERC1-207ENST00000560316 BTNL3Q6UXE8 466 aa13.91□□□□□ -0.18
HERC1-207ENST00000560316 LRRN1Q6UXK5 716 aa13.91□□□□□ -0.18
HERC1-207ENST00000560316 ITCHQ96J02 903 aa13.91□□□□□ -0.18
HERC1-207ENST00000560316 SSBP3Q9BWW4 388 aaPredicted RBP13.91□□□□□ -0.18
HERC1-207ENST00000560316 PRDM13Q9H4Q3 707 aa13.91□□□□□ -0.18
HERC1-207ENST00000560316 WDR55Q9H6Y2 383 aaPredicted RBP13.91□□□□□ -0.18
HERC1-207ENST00000560316 NANOGQ9H9S0 305 aa13.91□□□□□ -0.18
HERC1-207ENST00000560316 CCNB1IP1Q9NPC3 277 aa13.91□□□□□ -0.18
HERC1-207ENST00000560316 HAO1Q9UJM8 370 aa13.91□□□□□ -0.18
HERC1-207ENST00000560316 RNF114Q9Y508 228 aa13.91□□□□□ -0.18
HERC1-207ENST00000560316 KMT2CQ8NEZ4 4911 aaKnown RBP13.9□□□□□ -0.18
HERC1-207ENST00000560316 IGHV2-70DA0A0C4DH43 119 aa13.9□□□□□ -0.18
HERC1-207ENST00000560316 CLIC1O00299 241 aa13.9□□□□□ -0.18
HERC1-207ENST00000560316 TIMM8AO60220 97 aaPredicted RBP13.9□□□□□ -0.18
HERC1-207ENST00000560316 MGRN1O60291 552 aa13.9□□□□□ -0.18
HERC1-207ENST00000560316 IGHG1P01857 330 aa13.9□□□□□ -0.18
HERC1-207ENST00000560316 WNT2P09544 360 aa13.9□□□□□ -0.18
HERC1-207ENST00000560316 BMP2P12643 396 aa13.9□□□□□ -0.18
HERC1-207ENST00000560316 ZNF32P17041 273 aa13.9□□□□□ -0.18
HERC1-207ENST00000560316 EPHA3P29320 983 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms