RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 MARCH7Q9H992 704 aa10.76□□□□□ -0.69
RABGGTA-213ENST00000560127 C12orf10Q9HB07 376 aa10.76□□□□□ -0.69
RABGGTA-213ENST00000560127 MED4Q9NPJ6 270 aa10.76□□□□□ -0.69
RABGGTA-213ENST00000560127 FGFR1OP2Q9NVK5 253 aa10.76□□□□□ -0.69
RABGGTA-213ENST00000560127 P2RX2Q9UBL9 471 aa10.76□□□□□ -0.69
RABGGTA-213ENST00000560127 TRBV5-3A0A0A0MS03 114 aa10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 TRAV40A0A0B4J280 105 aa10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 G3V4G9 280 aa10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 ATP8B1O43520 1251 aa10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 CLPXO76031 633 aa10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 PRB2P02812 416 aaPredicted RBP10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 ADH4P08319 380 aa10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 MPV17P39210 176 aa10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 POLR2JP52435 117 aaKnown RBP10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 TBC1D28Q2M2D7 210 aa10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 TMEM155Q4W5P6 130 aa10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 RPS26P11Q5JNZ5 115 aaPredicted RBP10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 SLC2A7Q6PXP3 512 aa10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 BLOC1S3Q6QNY0 202 aa10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 LRRC28Q86X40 367 aaPredicted RBP10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 C10orf111Q8N326 155 aa10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 KLHL36Q8N4N3 616 aa10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 TRIML2Q8N7C3 387 aa10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 SCAIQ8N9R8 606 aa10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 CPEB3Q8NE35 698 aaKnown RBP10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 OR1J2Q8NGS2 313 aa10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 SLC38A5Q8WUX1 472 aa10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 IPCEF1Q8WWN9 437 aaPredicted RBP10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 GTF2H4Q92759 462 aa10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 TMEM54Q969K7 222 aa10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 ZDHHC16Q969W1 377 aa10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 PANX1Q96RD7 426 aa10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 CHIAQ9BZP6 476 aa10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 PAIP1Q9H074 479 aaKnown RBP10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 C1orf198Q9H425 327 aa10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 TMEM38BQ9NVV0 291 aa10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 OR5V1Q9UGF6 321 aa10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 RNF114Q9Y508 228 aa10.75□□□□□ -0.69
RABGGTA-213ENST00000560127 A0A1B0GWA3 101 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 PLSCR5A0PG75 271 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 SERPINI2O75830 405 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 BGLAPP02818 100 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 BCHEP06276 602 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 CD55P08174 381 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 HTR2AP28223 471 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 CRISP3P54108 245 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 BIDP55957 195 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 PROK1P58294 105 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 PUDPQ08623 228 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 SF3A3Q12874 501 aaKnown RBP eCLIP10.74□□□□□ -0.697e-7■□□□□ 9.8
RABGGTA-213ENST00000560127 ZMYND11Q15326 602 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 PAGE3Q5JUK9 113 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 SPATA46Q5T0L3 261 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 THEM4Q5T1C6 240 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 KPRPQ5T749 579 aaPredicted RBP10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 FAM205BPQ63HN1 556 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 TMEM53Q6P2H8 277 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 LRFN4Q6PJG9 635 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 BRD3OSQ6XYD6 125 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 Q6YL49 198 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 ZNF621Q6ZSS3 439 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 MSANTD1Q6ZTZ1 278 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 PXKQ7Z7A4 578 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 ZNF101Q8IZC7 436 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 POU5F2Q8N7G0 328 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 OR4K5Q8NGD3 323 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 OR10S1Q8NGN2 331 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 LINC01006Q8NI28 216 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 MARS2Q96GW9 593 aaKnown RBP10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 MOGAT1Q96PD6 335 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 TMEM120AQ9BXJ8 343 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 IKZF5Q9H5V7 419 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 RNF121Q9H920 327 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 TMEM106BQ9NUM4 274 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 SLC25A37Q9NYZ2 338 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 GLTPQ9NZD2 209 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 CALML5Q9NZT1 146 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 SLAMF8Q9P0V8 285 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 RPS6KB2Q9UBS0 482 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 ZNF232Q9UNY5 417 aa10.74□□□□□ -0.69
RABGGTA-213ENST00000560127 C3orf80F5H4A9 247 aa10.73□□□□□ -0.69
RABGGTA-213ENST00000560127 PLPP3O14495 311 aa10.73□□□□□ -0.69
RABGGTA-213ENST00000560127 FARS2O95363 451 aaKnown RBP10.73□□□□□ -0.69
RABGGTA-213ENST00000560127 PTHP01270 115 aa10.73□□□□□ -0.69
RABGGTA-213ENST00000560127 IL6P05231 212 aa10.73□□□□□ -0.69
RABGGTA-213ENST00000560127 ETFAP13804 333 aa10.73□□□□□ -0.69
RABGGTA-213ENST00000560127 MDH1P40925 334 aaKnown RBP10.73□□□□□ -0.69
RABGGTA-213ENST00000560127 BTG1P62324 171 aa10.73□□□□□ -0.69
RABGGTA-213ENST00000560127 PDCD1Q15116 288 aa10.73□□□□□ -0.69
RABGGTA-213ENST00000560127 ZNF718Q3SXZ3 478 aa10.73□□□□□ -0.69
RABGGTA-213ENST00000560127 ESCO2Q56NI9 601 aa10.73□□□□□ -0.69
RABGGTA-213ENST00000560127 LRRN1Q6UXK5 716 aa10.73□□□□□ -0.69
RABGGTA-213ENST00000560127 ZNF283Q8N7M2 679 aa10.73□□□□□ -0.69
RABGGTA-213ENST00000560127 OR6S1Q8NH40 331 aa10.73□□□□□ -0.69
RABGGTA-213ENST00000560127 SLC35B4Q969S0 331 aa10.73□□□□□ -0.69
RABGGTA-213ENST00000560127 DACT3Q96B18 629 aaPredicted RBP10.73□□□□□ -0.69
RABGGTA-213ENST00000560127 TMEM19Q96HH6 336 aa10.73□□□□□ -0.69
RABGGTA-213ENST00000560127 SIGLEC11Q96RL6 698 aa10.73□□□□□ -0.69
RABGGTA-213ENST00000560127 ZBTB18Q99592 522 aa10.73□□□□□ -0.69
RABGGTA-213ENST00000560127 ASPNQ9BXN1 380 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms