RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 GUSBP1Q15486 140 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 UBE2UQ5VVX9 321 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 GFRALQ6UXV0 394 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 LHFPL3Q86UP9 236 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 CD163Q86VB7 1156 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 SLC35F2Q8IXU6 374 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 FCGR1BQ92637 280 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 ULBP2Q9BZM5 246 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 LINC00470Q9BZP3 86 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 YIPF3Q9GZM5 350 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 SLCO5A1Q9H2Y9 848 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 UGT2A1Q9Y4X1 527 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 A0A1W2PQL4 384 aaPredicted RBP10.77□□□□□ -0.69
HERC1-205ENST00000559886 TMEM129A0AVI4 362 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 DAPL1A0PJW8 107 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 OR6C65A6NJZ3 312 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 TTLL8A6PVC2 850 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 DHHO43323 396 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 MPZL1O95297 269 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 HOXD4P09016 255 aaPredicted RBP10.77□□□□□ -0.69
HERC1-205ENST00000559886 EDNRAP25101 427 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 HCCSP53701 268 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 RTL6Q6ICC9 239 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 NUFIP2Q7Z417 695 aaKnown RBP10.77□□□□□ -0.69
HERC1-205ENST00000559886 GPR137CQ8N3F9 429 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 C9orf106Q8NAJ2 232 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 RORBQ92753 470 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 MUL1Q969V5 352 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 TBX5Q99593 518 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 TM9SF2Q99805 663 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 MND1Q9BWT6 205 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 B3GAT2Q9NPZ5 323 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 ZNF835Q9Y2P0 537 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 LSM2Q9Y333 95 aaKnown RBP10.77□□□□□ -0.69
HERC1-205ENST00000559886 INTS1Q8N201 2190 aaKnown RBP10.77□□□□□ -0.69
HERC1-205ENST00000559886 SHANK1Q9Y566 2161 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 MBD3L4A6NDZ8 208 aaPredicted RBP10.76□□□□□ -0.69
HERC1-205ENST00000559886 MBD3L3A6NE82 208 aaPredicted RBP10.76□□□□□ -0.69
HERC1-205ENST00000559886 MBD3L5A6NJ08 208 aaPredicted RBP10.76□□□□□ -0.69
HERC1-205ENST00000559886 INMTO95050 263 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 LCKP06239 509 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 EDN3P14138 238 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 ZNF85Q03923 595 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 GALEQ14376 348 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 TSPO2Q5TGU0 170 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 OR2A2Q6IF42 318 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 FOXL2NBQ6ZUU3 175 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.76□□□□□ -0.69
HERC1-205ENST00000559886 CDC20BQ86Y33 519 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 OR6N2Q8NGY6 317 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 MBD3L2Q8NHZ7 208 aaPredicted RBP10.76□□□□□ -0.69
HERC1-205ENST00000559886 APH1AQ96BI3 265 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 CNTNAP3BQ96NU0 1288 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 MNTQ99583 582 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 CNTNAP3Q9BZ76 1288 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 FAM215AQ9Y5M1 114 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 RP1L1Q8IWN7 2480 aaPredicted RBP10.76□□□□□ -0.69
HERC1-205ENST00000559886 A0A1W2PPL8 197 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 ZNF99A8MXY4 864 aaPredicted RBP10.76□□□□□ -0.69
HERC1-205ENST00000559886 ZNF593O00488 134 aaPredicted RBP10.76□□□□□ -0.69
HERC1-205ENST00000559886 MYL12BO14950 172 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 PSKH1P11801 424 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 ENTPD1P49961 510 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 ADAM8P78325 824 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 KCNMB1Q16558 191 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 MEP1BQ16820 701 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 PCK2Q16822 640 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 TEX30Q5JUR7 227 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 SYT6Q5T7P8 510 aaPredicted RBP10.76□□□□□ -0.69
HERC1-205ENST00000559886 C1orf185Q5T7R7 199 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 SEM1Q6ZVN7 128 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 FAM214BQ7L5A3 538 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 LINGO2Q7L985 606 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 DPY19L4Q7Z388 723 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 ZNF485Q8NCK3 441 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 C11orf40Q8WZ69 217 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 ZNF837Q96EG3 531 aaPredicted RBP10.76□□□□□ -0.69
HERC1-205ENST00000559886 ALKBH3Q96Q83 286 aaPredicted RBP10.76□□□□□ -0.69
HERC1-205ENST00000559886 OR5M11Q96RB7 305 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 ALG8Q9BVK2 526 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 RBM24Q9BX46 236 aaKnown RBP10.76□□□□□ -0.69
HERC1-205ENST00000559886 SEC61A2Q9H9S3 476 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 CRLF2Q9HC73 371 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 BATF3Q9NR55 127 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 SLC7A10Q9NS82 523 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 COPS3Q9UNS2 423 aa10.76□□□□□ -0.69
HERC1-205ENST00000559886 CAB39Q9Y376 341 aaPredicted RBP10.76□□□□□ -0.69
HERC1-205ENST00000559886 PRRG2O14669 202 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 SCG5P05408 212 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 ZNF823P16415 610 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 CDAP32320 146 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 SPHARQ15513 63 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 OR2G6Q5TZ20 316 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 OTPQ5XKR4 325 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 SSX6Q7RTT6 188 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 ZNF367Q7RTV3 350 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 GCNT2Q8N0V5 402 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 RFLNBQ8N5W9 214 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 OR52N1Q8NH53 320 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 OTOSQ8NHW6 89 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms