RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 C3orf33Q6P1S2 294 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 DNM1P34Q6PK57 102 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 LINC00696Q6ZRV3 163 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 DRAXINQ8NBI3 349 aaPredicted RBP15.93■□□□□ 0.14
SNX1-208ENST00000559844 OTOSQ8NHW6 89 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 EXTL1Q92935 676 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 UBL7Q96S82 380 aaPredicted RBP15.93■□□□□ 0.14
SNX1-208ENST00000559844 ZNF552Q9H707 407 aaPredicted RBP15.93■□□□□ 0.14
SNX1-208ENST00000559844 STMN3Q9NZ72 180 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 IKZF2Q9UKS7 526 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 HRH3Q9Y5N1 445 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 EML6Q6ZMW3 1958 aa15.92■□□□□ 0.14
SNX1-208ENST00000559844 IGLV1-36A0A0B4J1U3 117 aa15.92■□□□□ 0.14
SNX1-208ENST00000559844 FAM25AB3EWG3 89 aa15.92■□□□□ 0.14
SNX1-208ENST00000559844 FAM25CB3EWG5 89 aa15.92■□□□□ 0.14
SNX1-208ENST00000559844 FAM25GB3EWG6 89 aa15.92■□□□□ 0.14
SNX1-208ENST00000559844 PSMD9O00233 223 aa15.92■□□□□ 0.14
SNX1-208ENST00000559844 UPK3AO75631 287 aa15.92■□□□□ 0.14
SNX1-208ENST00000559844 CEACAM4O75871 244 aa15.92■□□□□ 0.14
SNX1-208ENST00000559844 ABHD16AO95870 558 aa15.92■□□□□ 0.14
SNX1-208ENST00000559844 IMPDH2P12268 514 aa15.92■□□□□ 0.14
SNX1-208ENST00000559844 IL11P20809 199 aa15.92■□□□□ 0.14
SNX1-208ENST00000559844 ADH6P28332 368 aa15.92■□□□□ 0.14
SNX1-208ENST00000559844 RANBP1P43487 201 aa15.92■□□□□ 0.14
SNX1-208ENST00000559844 SSR4P51571 173 aa15.92■□□□□ 0.14
SNX1-208ENST00000559844 GDPD3Q7L5L3 318 aa15.92■□□□□ 0.14
SNX1-208ENST00000559844 DPY19L4Q7Z388 723 aa15.92■□□□□ 0.14
SNX1-208ENST00000559844 LRRC28Q86X40 367 aaPredicted RBP15.92■□□□□ 0.14
SNX1-208ENST00000559844 BEST3Q8N1M1 668 aa15.92■□□□□ 0.14
SNX1-208ENST00000559844 POC1BQ8TC44 478 aa15.92■□□□□ 0.14
SNX1-208ENST00000559844 SLC25A43Q8WUT9 341 aaPredicted RBP15.92■□□□□ 0.14
SNX1-208ENST00000559844 THEM6Q8WUY1 208 aa15.92■□□□□ 0.14
SNX1-208ENST00000559844 ASB10Q8WXI3 467 aa15.92■□□□□ 0.14
SNX1-208ENST00000559844 C5orf34Q96MH7 638 aa15.92■□□□□ 0.14
SNX1-208ENST00000559844 PDCD1LG2Q9BQ51 273 aa15.92■□□□□ 0.14
SNX1-208ENST00000559844 TBC1D24Q9ULP9 559 aa15.92■□□□□ 0.14
SNX1-208ENST00000559844 PKD1L2Q7Z442 2459 aa15.92■□□□□ 0.14
SNX1-208ENST00000559844 A0A087WZY1 265 aa15.91■□□□□ 0.14
SNX1-208ENST00000559844 A0A0G2JK05 382 aa15.91■□□□□ 0.14
SNX1-208ENST00000559844 ANKRD61A6NGH8 418 aa15.91■□□□□ 0.14
SNX1-208ENST00000559844 NOTOA8MTQ0 251 aa15.91■□□□□ 0.14
SNX1-208ENST00000559844 PDCD5O14737 125 aa15.91■□□□□ 0.14
SNX1-208ENST00000559844 MELKQ14680 651 aa15.91■□□□□ 0.14
SNX1-208ENST00000559844 IL20RBQ6UXL0 311 aa15.91■□□□□ 0.14
SNX1-208ENST00000559844 ADPRHL1Q8NDY3 354 aa15.91■□□□□ 0.14
SNX1-208ENST00000559844 ZBTB8AQ96BR9 441 aa15.91■□□□□ 0.14
SNX1-208ENST00000559844 ZCCHC4Q9H5U6 513 aa15.91■□□□□ 0.14
SNX1-208ENST00000559844 PPP1R3EQ9H7J1 279 aa15.91■□□□□ 0.14
SNX1-208ENST00000559844 RASD1Q9Y272 281 aa15.91■□□□□ 0.14
SNX1-208ENST00000559844 A0A1W2PNV4 684 aa15.91■□□□□ 0.14
SNX1-208ENST00000559844 H3BML4 177 aa15.91■□□□□ 0.14
SNX1-208ENST00000559844 ZNF593O00488 134 aaPredicted RBP15.91■□□□□ 0.14
SNX1-208ENST00000559844 SEC14L5O43304 696 aa15.91■□□□□ 0.14
SNX1-208ENST00000559844 ZNF432O94892 652 aa15.91■□□□□ 0.14
SNX1-208ENST00000559844 RPP14O95059 124 aaKnown RBP15.91■□□□□ 0.14
SNX1-208ENST00000559844 ITGB2P05107 769 aa15.91■□□□□ 0.14
SNX1-208ENST00000559844 CSF3P09919 207 aa15.91■□□□□ 0.14
SNX1-208ENST00000559844 THBS2P35442 1172 aa15.91■□□□□ 0.14
SNX1-208ENST00000559844 NANOS3P60323 173 aaKnown RBP15.91■□□□□ 0.14
SNX1-208ENST00000559844 IL18Q14116 193 aa15.91■□□□□ 0.14
SNX1-208ENST00000559844 SLC35D2Q76EJ3 337 aa15.91■□□□□ 0.14
SNX1-208ENST00000559844 TMEM156Q8N614 296 aa15.91■□□□□ 0.14
SNX1-208ENST00000559844 OR5AK2Q8NH90 309 aa15.91■□□□□ 0.14
SNX1-208ENST00000559844 OR14A2Q96R54 314 aa15.91■□□□□ 0.14
SNX1-208ENST00000559844 ANKRD10Q9NXR5 420 aa15.91■□□□□ 0.14
SNX1-208ENST00000559844 ABRACLQ9P1F3 81 aa15.91■□□□□ 0.14
SNX1-208ENST00000559844 ABI3Q9P2A4 366 aa15.91■□□□□ 0.14
SNX1-208ENST00000559844 A0A1W2PQ09 198 aa15.9■□□□□ 0.14
SNX1-208ENST00000559844 SHISA8B8ZZ34 492 aa15.9■□□□□ 0.14
SNX1-208ENST00000559844 TMEM127O75204 238 aa15.9■□□□□ 0.14
SNX1-208ENST00000559844 F10P00742 488 aa15.9■□□□□ 0.14
SNX1-208ENST00000559844 HLA-DOBP13765 273 aa15.9■□□□□ 0.14
SNX1-208ENST00000559844 MAPK3P27361 379 aaPredicted RBP15.9■□□□□ 0.14
SNX1-208ENST00000559844 TALDO1P37837 337 aa15.9■□□□□ 0.14
SNX1-208ENST00000559844 OR10A3P58181 314 aa15.9■□□□□ 0.14
SNX1-208ENST00000559844 HSF1Q00613 529 aa15.9■□□□□ 0.14
SNX1-208ENST00000559844 GLO1Q04760 184 aa15.9■□□□□ 0.14
SNX1-208ENST00000559844 SELENBP1Q13228 472 aa15.9■□□□□ 0.14
SNX1-208ENST00000559844 ASAH1Q13510 395 aa15.9■□□□□ 0.14
SNX1-208ENST00000559844 SLC18B1Q6NT16 456 aa15.9■□□□□ 0.14
SNX1-208ENST00000559844 CCBE1Q6UXH8 406 aaPredicted RBP15.9■□□□□ 0.14
SNX1-208ENST00000559844 PLCZ1Q86YW0 608 aa15.9■□□□□ 0.14
SNX1-208ENST00000559844 CADM3Q8N126 398 aa15.9■□□□□ 0.14
SNX1-208ENST00000559844 ZNF454Q8N9F8 522 aa15.9■□□□□ 0.14
SNX1-208ENST00000559844 WDSUB1Q8N9V3 476 aa15.9■□□□□ 0.14
SNX1-208ENST00000559844 RNF166Q96A37 237 aaPredicted RBP15.9■□□□□ 0.14
SNX1-208ENST00000559844 NEURL2Q9BR09 285 aa15.9■□□□□ 0.14
SNX1-208ENST00000559844 ANGPTL4Q9BY76 406 aa15.9■□□□□ 0.14
SNX1-208ENST00000559844 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.9■□□□□ 0.14
SNX1-208ENST00000559844 PRORYQ9H606 182 aa15.9■□□□□ 0.14
SNX1-208ENST00000559844 FBXL2Q9UKC9 423 aa15.9■□□□□ 0.14
SNX1-208ENST00000559844 EFNA2O43921 213 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 ZFPL1O95159 310 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 IFNGR1P15260 489 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 SPNP16150 400 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 CTLA4P16410 223 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 APEX1P27695 318 aaKnown RBP15.89■□□□□ 0.13
SNX1-208ENST00000559844 MYBPHQ13203 477 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 NSMAFQ92636 917 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 RELTQ969Z4 430 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms