RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 PAQR6Q6TCH4 344 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 KIRREL2Q6UWL6 708 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 TMEM163Q8TC26 289 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 ZNF350Q9GZX5 532 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 UBQLN3Q9H347 655 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 ANKRD19PQ9H560 264 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 METTL8Q9H825 291 aaKnown RBP9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 RCE1Q9Y256 329 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 TRGV8A0A0C4DH27 118 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 SHISA8B8ZZ34 492 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 PHYHO14832 338 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 FZD7O75084 574 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 KIR2DL3P43628 341 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 GLCCI1Q86VQ1 547 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 TMEM41AQ96HV5 264 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 ARPC5LQ9BPX5 153 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 POTEKPQ9BYX7 375 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 BABAM2Q9NXR7 383 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 DIMT1Q9UNQ2 313 aaKnown RBP9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 ALPK2Q86TB3 2170 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 IL2RAP01589 272 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 TP53P04637 393 aaPredicted RBP9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 UCHL1P09936 223 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 FPR3P25089 353 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 POU3F4P49335 361 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 CAPZA1P52907 286 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 ART1P52961 327 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 CLDN15P56746 228 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 SYT14P1Q58G82 188 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 TIGD3Q6B0B8 471 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 FCRL1Q96LA6 429 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 GABARAPL3Q9BY60 117 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 NOX3Q9HBY0 568 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 EMC7Q9NPA0 242 aa9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 SIRT3Q9NTG7 399 aaPredicted RBP9.68□□□□□ -0.86
CARMIL3-202ENST00000559694 F5H5P2 479 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 MT-ATP6P00846 226 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 ZNF883P0CG24 379 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 IFNGR1P15260 489 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 FKBP2P26885 142 aaKnown RBP9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 PSMB10P40306 273 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 PLXNA3P51805 1871 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 FXYD6P3P58550 94 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 CXADRP78310 365 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 FOXK2Q01167 660 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 FOXF1Q12946 379 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 ZNF362Q5T0B9 420 aaPredicted RBP9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 SPINK14Q6IE38 97 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 OR7E24Q6IFN5 339 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 ZNF322Q6U7Q0 402 aaPredicted RBP9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 ZNF813Q6ZN06 617 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 KANSL1Q7Z3B3 1105 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 ZNF454Q8N9F8 522 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 ZNF511Q8NB15 262 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 OR52I1Q8NGK6 324 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 THRSPQ92748 146 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 DCLRE1CQ96SD1 692 aaKnown RBP9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 FAM173AQ9BQD7 235 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 PEX14O75381 377 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 NAGAP17050 411 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 CCR6P51684 374 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 DLX5P56178 289 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 USF2Q15853 346 aaPredicted RBP9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 MEPCEQ7L2J0 689 aaKnown RBP9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 MRGPREQ86SM8 312 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 GTPBP8Q8N3Z3 284 aaPredicted RBP9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 NANOGP1Q8N7R0 232 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 ZNF321PQ8N8H1 164 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 EXD3Q8N9H8 876 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 RASD2Q96D21 266 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 FAM122AQ96E09 287 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 RASL10BQ96S79 203 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 C7orf50Q9BRJ6 194 aaKnown RBP9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 ALG12Q9BV10 488 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 ASF1BQ9NVP2 202 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 C19orf67A6NJJ6 358 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 GMDSO60547 372 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 RAF1P04049 648 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 OR3A2P47893 321 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 S100A10P60903 97 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 GPR50Q13585 617 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 GPR176Q14439 515 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 DPY19L4Q7Z388 723 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 OR5M9Q8NGP3 310 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 TM4SF19Q96DZ7 209 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 CPNE2Q96FN4 548 aaPredicted RBP9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 ARL5BQ96KC2 179 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 MRGPRX4Q96LA9 322 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 ZNF582Q96NG8 517 aaPredicted RBP9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 OPALINQ96PE5 141 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 TRIB1Q96RU8 372 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 SYNPO2LQ9H987 977 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 ZNF226Q9NYT6 803 aa9.67□□□□□ -0.86
CARMIL3-202ENST00000559694 TCRBV16S1A1N1A0A5B0 115 aa9.66□□□□□ -0.86
CARMIL3-202ENST00000559694 FIGNL2A6NMB9 653 aa9.66□□□□□ -0.86
CARMIL3-202ENST00000559694 SYT7O43581 403 aa9.66□□□□□ -0.86
CARMIL3-202ENST00000559694 SPINK2P20155 84 aa9.66□□□□□ -0.86
CARMIL3-202ENST00000559694 NPR2P20594 1047 aa9.66□□□□□ -0.86
CARMIL3-202ENST00000559694 TBXA2RP21731 343 aa9.66□□□□□ -0.86
CARMIL3-202ENST00000559694 NFYAP23511 347 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms