RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 ASPNQ9BXN1 380 aa8.02□□□□□ -1.13
SMAD3-211ENST00000559460 GPR61Q9BZJ8 451 aa8.02□□□□□ -1.13
SMAD3-211ENST00000559460 CCNB1IP1Q9NPC3 277 aa8.02□□□□□ -1.13
SMAD3-211ENST00000559460 GAR1Q9NY12 217 aaKnown RBP8.02□□□□□ -1.13
SMAD3-211ENST00000559460 TMEM216Q9P0N5 145 aa8.02□□□□□ -1.13
SMAD3-211ENST00000559460 RPS6KB2Q9UBS0 482 aa8.02□□□□□ -1.13
SMAD3-211ENST00000559460 IL19Q9UHD0 177 aa8.02□□□□□ -1.13
SMAD3-211ENST00000559460 SIGLEC9Q9Y336 463 aa8.02□□□□□ -1.13
SMAD3-211ENST00000559460 UTP11Q9Y3A2 253 aaKnown RBP8.02□□□□□ -1.13
SMAD3-211ENST00000559460 COL7A1Q02388 2944 aa8.02□□□□□ -1.13
SMAD3-211ENST00000559460 DOCK11Q5JSL3 2073 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 LOC102725191A0A1B0GVB3 256 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 C5orf49A4QMS7 147 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 FTCDNL1E5RQL4 147 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 LSM1O15116 133 aaKnown RBP8.01□□□□□ -1.13
SMAD3-211ENST00000559460 NPIPB7O75200 414 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 LINC00032P0C843 101 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 LYL1P12980 280 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 PRPS1L1P21108 318 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 ARRB2P32121 409 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 CHI3L1P36222 383 aaPredicted RBP8.01□□□□□ -1.13
SMAD3-211ENST00000559460 NPY4RP50391 375 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 GDI2P50395 445 aaKnown RBP8.01□□□□□ -1.13
SMAD3-211ENST00000559460 MMP16P51512 607 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 PPP1CBP62140 327 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 MRPS25P82663 173 aaKnown RBP8.01□□□□□ -1.13
SMAD3-211ENST00000559460 TAF11Q15544 211 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 PGS1Q32NB8 556 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 LIN52Q52LA3 116 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 WDR25Q64LD2 544 aaPredicted RBP8.01□□□□□ -1.13
SMAD3-211ENST00000559460 ARL9Q6T311 187 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 ZCCHC23Q6ZST2 131 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 FRMD7Q6ZUT3 714 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 NET1Q7Z628 596 aaPredicted RBP8.01□□□□□ -1.13
SMAD3-211ENST00000559460 LCA5Q86VQ0 697 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 HOMEZQ8IX15 550 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 PDZD9Q8IXQ8 264 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 PIP4P2Q8N4L2 257 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 OR4K5Q8NGD3 323 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 OR2T11Q8NH01 316 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 ABHD4Q8TB40 342 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 FBXO25Q8TCJ0 367 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 NSMAFQ92636 917 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 DACT3Q96B18 629 aaPredicted RBP8.01□□□□□ -1.13
SMAD3-211ENST00000559460 NAPGQ99747 312 aaPredicted RBP8.01□□□□□ -1.13
SMAD3-211ENST00000559460 TMEM246Q9BRR3 403 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 ARMC7Q9H6L4 198 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 TMEM38BQ9NVV0 291 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 ZNRD1Q9P1U0 126 aa8.01□□□□□ -1.13
SMAD3-211ENST00000559460 EXOC1LA0A1B0GW35 172 aa8□□□□□ -1.13
SMAD3-211ENST00000559460 NPHS1O60500 1241 aa8□□□□□ -1.13
SMAD3-211ENST00000559460 CLIC3O95833 236 aa8□□□□□ -1.13
SMAD3-211ENST00000559460 SNRPAP09012 282 aaKnown RBP8□□□□□ -1.13
SMAD3-211ENST00000559460 MYL2P10916 166 aa8□□□□□ -1.13
SMAD3-211ENST00000559460 IRF2P14316 349 aa8□□□□□ -1.13
SMAD3-211ENST00000559460 GSTM3P21266 225 aa8□□□□□ -1.13
SMAD3-211ENST00000559460 AHCYP23526 432 aa8□□□□□ -1.13
SMAD3-211ENST00000559460 EEF1B2P24534 225 aaKnown RBP8□□□□□ -1.13
SMAD3-211ENST00000559460 STOMP27105 288 aa8□□□□□ -1.13
SMAD3-211ENST00000559460 KIR2DS4P43632 304 aa8□□□□□ -1.13
SMAD3-211ENST00000559460 ZNF84P51523 738 aa8□□□□□ -1.13
SMAD3-211ENST00000559460 FUT5Q11128 374 aa8□□□□□ -1.13
SMAD3-211ENST00000559460 PTGR1Q14914 329 aa8□□□□□ -1.13
SMAD3-211ENST00000559460 RUNDC3AQ59EK9 446 aa8□□□□□ -1.13
SMAD3-211ENST00000559460 ZNF101Q8IZC7 436 aa8□□□□□ -1.13
SMAD3-211ENST00000559460 ADPRHL1Q8NDY3 354 aa8□□□□□ -1.13
SMAD3-211ENST00000559460 COQ8BQ96D53 544 aa8□□□□□ -1.13
SMAD3-211ENST00000559460 PPP3R2Q96LZ3 170 aa8□□□□□ -1.13
SMAD3-211ENST00000559460 TRNT1Q96Q11 434 aaKnown RBP8□□□□□ -1.13
SMAD3-211ENST00000559460 OR2V2Q96R30 315 aa8□□□□□ -1.13
SMAD3-211ENST00000559460 PTDSS2Q9BVG9 487 aa8□□□□□ -1.13
SMAD3-211ENST00000559460 SPATA9Q9BWV2 254 aa8□□□□□ -1.13
SMAD3-211ENST00000559460 RAB17Q9H0T7 212 aa8□□□□□ -1.13
SMAD3-211ENST00000559460 MMADHCQ9H3L0 296 aaPredicted RBP8□□□□□ -1.13
SMAD3-211ENST00000559460 MTHFD2LQ9H903 347 aaPredicted RBP8□□□□□ -1.13
SMAD3-211ENST00000559460 ELOVL3Q9HB03 270 aa8□□□□□ -1.13
SMAD3-211ENST00000559460 RAB18Q9NP72 206 aa8□□□□□ -1.13
SMAD3-211ENST00000559460 MAN2C1Q9NTJ4 1040 aa8□□□□□ -1.13
SMAD3-211ENST00000559460 RLIMQ9NVW2 624 aa8□□□□□ -1.13
SMAD3-211ENST00000559460 ERVK-18Q9QC07 812 aa8□□□□□ -1.13
SMAD3-211ENST00000559460 MARCOQ9UEW3 520 aaPredicted RBP8□□□□□ -1.13
SMAD3-211ENST00000559460 RPUSD1Q9UJJ7 312 aaKnown RBP8□□□□□ -1.13
SMAD3-211ENST00000559460 C22orf46C9J442 243 aa7.99□□□□□ -1.13
SMAD3-211ENST00000559460 FBP2O00757 339 aa7.99□□□□□ -1.13
SMAD3-211ENST00000559460 AZIN1O14977 448 aa7.99□□□□□ -1.13
SMAD3-211ENST00000559460 FZD7O75084 574 aa7.99□□□□□ -1.13
SMAD3-211ENST00000559460 ZFPL1O95159 310 aa7.99□□□□□ -1.13
SMAD3-211ENST00000559460 CYB5R3P00387 301 aaPredicted RBP7.99□□□□□ -1.13
SMAD3-211ENST00000559460 IFNW1P05000 195 aa7.99□□□□□ -1.13
SMAD3-211ENST00000559460 NR2F1P10589 423 aa7.99□□□□□ -1.13
SMAD3-211ENST00000559460 HLA-DOBP13765 273 aa7.99□□□□□ -1.13
SMAD3-211ENST00000559460 MMP9P14780 707 aa7.99□□□□□ -1.13
SMAD3-211ENST00000559460 FAHP16930 419 aa7.99□□□□□ -1.13
SMAD3-211ENST00000559460 BIDP55957 195 aa7.99□□□□□ -1.13
SMAD3-211ENST00000559460 PUDPQ08623 228 aa7.99□□□□□ -1.13
SMAD3-211ENST00000559460 SYPL1Q16563 259 aa7.99□□□□□ -1.13
SMAD3-211ENST00000559460 ZNF404Q494X3 552 aa7.99□□□□□ -1.13
SMAD3-211ENST00000559460 LRRC74BQ6ZQY2 392 aa7.99□□□□□ -1.13
SMAD3-211ENST00000559460 DCDC5Q6ZRR9 648 aa7.99□□□□□ -1.13
SMAD3-211ENST00000559460 CLECL1Q8IZS7 167 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms