RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 NSL1Q96IY1 281 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 RSRC1Q96IZ7 334 aaKnown RBP7.08□□□□□ -1.28
SNX1-207ENST00000559401 C7orf34Q96L11 122 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 ZNF570Q96NI8 536 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 KCNK17Q96T54 332 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 SEPHS2Q99611 448 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 SYT3Q9BQG1 590 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 ALG12Q9BV10 488 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 RAB1BQ9H0U4 201 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 LRMDAQ9H2I8 198 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 TPK1Q9H3S4 243 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 C1orf198Q9H425 327 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 SIAEQ9HAT2 523 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 SMURF2Q9HAU4 748 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 IL20RAQ9UHF4 553 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 SLC7A8Q9UHI5 535 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 DUSP13Q9UII6 198 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 TMCC3Q9ULS5 477 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 FZR1Q9UM11 496 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 ADAM18Q9Y3Q7 739 aa7.08□□□□□ -1.28
SNX1-207ENST00000559401 IGKV1D-43A0A0B4J1Z2 117 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 TEX13CA0A0J9YWL9 993 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 A0A1W2PPW3 197 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 UNC119BA6NIH7 251 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 SOCS2O14508 198 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 OR10H3O60404 316 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 STAMBPO95630 424 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 F12P00748 615 aaPredicted RBP7.07□□□□□ -1.28
SNX1-207ENST00000559401 LCKP06239 509 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 CD14P08571 375 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 ZNF35P13682 527 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 SLC25A16P16260 332 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 ZNF32P17041 273 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 APEX1P27695 318 aaKnown RBP7.07□□□□□ -1.28
SNX1-207ENST00000559401 RRM2P31350 389 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 PPOXP50336 477 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 PDLIM4P50479 330 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 KRR1Q13601 381 aaKnown RBP7.07□□□□□ -1.28
SNX1-207ENST00000559401 GGTLC2Q14390 218 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 SEC23BQ15437 767 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 NRN1LQ496H8 165 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 PABPC1L2AQ5JQF8 200 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 THEM4Q5T1C6 240 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 SLC25A47Q6Q0C1 308 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 ZNF584Q8IVC4 421 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 ZDHHC21Q8IVQ6 265 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 ZCCHC24Q8N2G6 241 aaKnown RBP7.07□□□□□ -1.28
SNX1-207ENST00000559401 ARIH2OSQ8N7S6 290 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 LRRC75AQ8NAA5 344 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 ZNF519Q8TB69 540 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 FANK1Q8TC84 345 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 MRPL24Q96A35 216 aaKnown RBP7.07□□□□□ -1.28
SNX1-207ENST00000559401 RASD2Q96D21 266 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 POM121Q96HA1 1249 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 Q96M85 177 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 ZNF75AQ96N20 296 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 FOXN4Q96NZ1 517 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 PIMREGQ9BSJ6 248 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 MRPL37Q9BZE1 423 aaKnown RBP7.07□□□□□ -1.28
SNX1-207ENST00000559401 CD300AQ9UGN4 299 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 FBXO9Q9UK97 447 aaPredicted RBP7.07□□□□□ -1.28
SNX1-207ENST00000559401 UGT2A1Q9Y4X1 527 aa7.07□□□□□ -1.28
SNX1-207ENST00000559401 SLC22A23A1A5C7 686 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 C12orf71A8MTZ7 269 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 INAFM1C9JVW0 142 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 M0R233 179 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 SYNGR3O43761 229 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 SEMG1P04279 462 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 ADRA2AP08913 450 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 HOXB4P17483 251 aaPredicted RBP7.06□□□□□ -1.28
SNX1-207ENST00000559401 ATP6V1B2P21281 511 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 MSR1P21757 451 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 CALB2P22676 271 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 LAP3P28838 519 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 GLRXP35754 106 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 OMPP47874 163 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 LIMS1P48059 325 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 CENPAP49450 140 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 GDI2P50395 445 aaKnown RBP7.06□□□□□ -1.28
SNX1-207ENST00000559401 RPS6KA3P51812 740 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 ZNF133P52736 654 aaPredicted RBP7.06□□□□□ -1.28
SNX1-207ENST00000559401 SELENOVP59797 346 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 FHL1Q13642 323 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 MAD2L1BPQ15013 274 aaPredicted RBP7.06□□□□□ -1.28
SNX1-207ENST00000559401 FXNQ16595 210 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 NKPD1Q17RQ9 610 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 ALKBH6Q3KRA9 238 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 SPATS1Q496A3 300 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 IQCCQ4KMZ1 466 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 MESTQ5EB52 335 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 RGS7BPQ6MZT1 257 aaPredicted RBP7.06□□□□□ -1.28
SNX1-207ENST00000559401 DNM1P46Q6ZS02 220 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 RINLQ6ZS11 566 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 ALDH16A1Q8IZ83 802 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 PAQR4Q8N4S7 273 aaPredicted RBP7.06□□□□□ -1.28
SNX1-207ENST00000559401 AKR7LQ8NHP1 331 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 C10orf105Q8TEF2 133 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 NABP1Q96AH0 204 aa7.06□□□□□ -1.28
SNX1-207ENST00000559401 CCDC124Q96CT7 223 aaKnown RBP7.06□□□□□ -1.28
SNX1-207ENST00000559401 NMD3Q96D46 503 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms