RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 RNF13O43567 381 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 LMX1BO60663 402 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 TPST2O60704 377 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 SHOX2O60902 331 aaPredicted RBP6.32□□□□□ -1.4
SPG11-213ENST00000558988 MFN2O95140 757 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 RAB36O95755 333 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 TGFAP01135 160 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 HIST1H2ABP04908 130 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 ADRA2AP08913 450 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 PATE4P0C8F1 98 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 LYNX1P0DP58 116 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 DAOP14920 347 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 GPX2P18283 190 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 ARR3P36575 388 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 NR4A2P43354 598 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 CSNK1A1P48729 337 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 GZMKP49863 264 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 SUMO1P63165 101 aaKnown RBP6.32□□□□□ -1.4
SPG11-213ENST00000558988 CCNIQ14094 377 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 MFSD13AQ14CX5 517 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 MAD2L1BPQ15013 274 aaPredicted RBP6.32□□□□□ -1.4
SPG11-213ENST00000558988 ADRM1Q16186 407 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 GSG1Q2KHT4 349 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 MS4A18Q3C1V0 323 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 ALKBH6Q3KRA9 238 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 RUNDC3AQ59EK9 446 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 ENTPD8Q5MY95 495 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 GKAP1Q5VSY0 366 aaPredicted RBP6.32□□□□□ -1.4
SPG11-213ENST00000558988 FAM91A1Q658Y4 838 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 FAM166AQ6J272 317 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 KRTAP5-1Q6L8H4 278 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 TTC33Q6PID6 262 aaPredicted RBP6.32□□□□□ -1.4
SPG11-213ENST00000558988 C5orf46Q6UWT4 87 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 DLEU7Q6UYE1 221 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 DEF8Q6ZN54 512 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 HIST3H2AQ7L7L0 130 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 NET1Q7Z628 596 aaPredicted RBP6.32□□□□□ -1.4
SPG11-213ENST00000558988 PTOV1Q86YD1 416 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 RBM45Q8IUH3 476 aaKnown RBP6.32□□□□□ -1.4
SPG11-213ENST00000558988 WDFY1Q8IWB7 410 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 C20orf196Q8IYI0 205 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 LRRC17Q8N6Y2 441 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 LSMEM1Q8N8F7 131 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 ICA1LQ8NDH6 482 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 GPR32P1Q8NGA4 272 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 OR4F15Q8NGB8 312 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 OR6T1Q8NGN1 323 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 OR10A6Q8NH74 314 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 CKAP2Q8WWK9 683 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 HIST1H2ACQ93077 130 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 SLC35B4Q969S0 331 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 SNX18Q96RF0 628 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 CGREF1Q99674 301 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 BPESC1Q9GZL8 116 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 RAB1BQ9H0U4 201 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 RABEP2Q9H5N1 569 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 TMEM38AQ9H6F2 299 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 C12orf10Q9HB07 376 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 SLC52A3Q9NQ40 469 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 CDC42EP3Q9UKI2 254 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 KCNS2Q9ULS6 477 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 USP22Q9UPT9 525 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 ZFHX3Q15911 3703 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 A0A1W2PPW3 197 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 LOC390937A0A1W2PQ73 354 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 MCIDASD6RGH6 385 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 RPL36A-HNRNPH2H7BZ11 118 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 PLPP3O14495 311 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 CHP2O43745 196 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 IGKV3-15P01624 115 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 IGLV1-44P01699 117 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 FAM157CP0CG43 387 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 SRD5A1P18405 259 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 TNFRSF1BP20333 461 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 IGFBP5P24593 272 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 APEX1P27695 318 aaKnown RBP6.31□□□□□ -1.4
SPG11-213ENST00000558988 ALDH3B1P43353 468 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 MRPL19P49406 292 aaKnown RBP6.31□□□□□ -1.4
SPG11-213ENST00000558988 PPOXP50336 477 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 ATP4BP51164 291 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 MYBPC1Q00872 1141 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 GALK2Q01415 458 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 RAB39AQ14964 217 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 NPTX1Q15818 432 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 DUSP7Q16829 419 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 TRMT5Q32P41 509 aaKnown RBP6.31□□□□□ -1.4
SPG11-213ENST00000558988 MMEL1Q495T6 779 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 RABL3Q5HYI8 236 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 WDR88Q6ZMY6 472 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 SLC35D2Q76EJ3 337 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 NANOGNBQ7Z5D8 188 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 PHC2Q8IXK0 858 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 SCAIQ8N9R8 606 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 OR4D11Q8NGI4 311 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 OR14K1Q8NGZ2 314 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 OR5J2Q8NH18 312 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 MAGEE2Q8TD90 523 aaPredicted RBP6.31□□□□□ -1.4
SPG11-213ENST00000558988 ADAMTS16Q8TE57 1224 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 CHAC2Q8WUX2 184 aa6.31□□□□□ -1.4
SPG11-213ENST00000558988 PROX1Q92786 737 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms