RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 HNRNPCL2B2RXH8 293 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 HNRNPCL3B7ZW38 293 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 MS4A18H0YCH9 400 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 BIRC5O15392 142 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 PLPP2O43688 288 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 OR2T1O43869 369 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 HNRNPCL1O60812 293 aaKnown RBP8.21□□□□□ -1.1
SPG11-212ENST00000558790 UBL3O95164 117 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 ANP32DO95626 131 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 CLPTM1O96005 669 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 PATE4P0C8F1 98 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 HNRNPCL4P0DMR1 293 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 EPHA3P29320 983 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 RAB1AP62820 205 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 CCL8P80075 99 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 CD69Q07108 199 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 RNF151Q2KHN1 245 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 MS4A18Q3C1V0 323 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 GLIPR1L2Q4G1C9 344 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 ALG10BQ5I7T1 473 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 ACSM5Q6NUN0 579 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 PAQR4Q8N4S7 273 aaPredicted RBP8.21□□□□□ -1.1
SPG11-212ENST00000558790 TEX29Q8N6K0 151 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 OR4M2Q8NGB6 313 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 FGFBP3Q8TAT2 258 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.21□□□□□ -1.1
SPG11-212ENST00000558790 GTF3AQ92664 365 aaKnown RBP8.21□□□□□ -1.1
SPG11-212ENST00000558790 SLC35B4Q969S0 331 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 SLC41A3Q96GZ6 507 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 TXNDC15Q96J42 360 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 LRR1Q96L50 414 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 MOGAT1Q96PD6 335 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 KRTAP4-12Q9BQ66 201 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 OR51B6Q9H340 312 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 WDR55Q9H6Y2 383 aaPredicted RBP8.21□□□□□ -1.1
SPG11-212ENST00000558790 B3GAT2Q9NPZ5 323 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 ZNF346Q9UL40 294 aaKnown RBP8.21□□□□□ -1.1
SPG11-212ENST00000558790 POFUT2Q9Y2G5 429 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 IFT52Q9Y366 437 aa8.21□□□□□ -1.1
SPG11-212ENST00000558790 TMEM247A6NEH6 219 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 C17orf100A8MU93 164 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 LRRN3E7EW58 273 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 ZNF500O60304 480 aaPredicted RBP8.2□□□□□ -1.1
SPG11-212ENST00000558790 SERPINI2O75830 405 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 FSHBP01225 129 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 IGHV2-5P01817 119 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 BGLAPP02818 100 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 IL6P05231 212 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 ZCCHC18P0CG32 403 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 MTNR1BP49286 362 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 ERVS71-1P61550 626 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 VSNL1P62760 191 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 UBA52P62987 128 aaKnown RBP8.2□□□□□ -1.1
SPG11-212ENST00000558790 PUDPQ08623 228 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 BST1Q10588 318 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 PDCD4Q53EL6 469 aaKnown RBP8.2□□□□□ -1.1
SPG11-212ENST00000558790 ZMAT1Q5H9K5 638 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 DCAF12L2Q5VW00 463 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 RGS7BPQ6MZT1 257 aaPredicted RBP8.2□□□□□ -1.1
SPG11-212ENST00000558790 NHLRC1Q6VVB1 395 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 ZNF771Q7L3S4 317 aaPredicted RBP8.2□□□□□ -1.1
SPG11-212ENST00000558790 KIRREL3Q8IZU9 778 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 BPIFB2Q8N4F0 458 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 LSMEM1Q8N8F7 131 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 SCAIQ8N9R8 606 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 GLB1L3Q8NCI6 653 aaPredicted RBP8.2□□□□□ -1.1
SPG11-212ENST00000558790 OR9I1Q8NGQ6 314 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 OR6N1Q8NGY5 312 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 BBS10Q8TAM1 723 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 C22orf15Q8WYQ4 148 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 RAB39BQ96DA2 213 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 ROPN1BQ9BZX4 212 aaPredicted RBP8.2□□□□□ -1.1
SPG11-212ENST00000558790 OR10A2Q9H208 303 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 DENND2DQ9H6A0 471 aaPredicted RBP8.2□□□□□ -1.1
SPG11-212ENST00000558790 ROPN1Q9HAT0 212 aaPredicted RBP8.2□□□□□ -1.1
SPG11-212ENST00000558790 A4GALTQ9NPC4 353 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 SLC52A3Q9NQ40 469 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 HINT3Q9NQE9 182 aaKnown RBP8.2□□□□□ -1.1
SPG11-212ENST00000558790 TAAR3PQ9P1P4 343 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 FBXL3Q9UKT7 428 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 PPIAL4AQ9Y536 164 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 CACNG2Q9Y698 323 aa8.2□□□□□ -1.1
SPG11-212ENST00000558790 COL7A1Q02388 2944 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 IGLV3-9A0A075B6K5 115 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 IGHV1-69-2A0A0G2JMI3 117 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 CLDN25C9JDP6 229 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 J3QLI3 93 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 TM9SF1O15321 606 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 SLC22A3O75751 556 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 PRSS23O95084 383 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 LY86O95711 162 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 SERPINA5P05154 406 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 CCL2P13500 99 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 IDO1P14902 403 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 ANPEPP15144 967 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 PRKAR1BP31321 381 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 CSNK1A1P48729 337 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 KLF3P57682 345 aaPredicted RBP8.19□□□□□ -1.1
SPG11-212ENST00000558790 NCALDP61601 193 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 GLO1Q04760 184 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms