RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 SOX4Q06945 474 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-248ENST00000558190 NCAPD2Q15021 1401 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 GPR142Q7Z601 462 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 MRPL10Q7Z7H8 261 aaKnown RBP3.39□□□□□ -1.87
ATXN3-248ENST00000558190 OR9A2Q8NGT5 310 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 RTN4IP1Q8WWV3 396 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-248ENST00000558190 EMG1Q92979 244 aaKnown RBP3.39□□□□□ -1.87
ATXN3-248ENST00000558190 RAB24Q969Q5 203 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 FGF20Q9NP95 211 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-248ENST00000558190 C2orf42Q9NWW7 574 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 WSB2Q9NYS7 404 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-248ENST00000558190 FBXO4Q9UKT5 387 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 A0A1B0GUH1 482 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 CIDEAO60543 219 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 ZNF888P0CJ79 500 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-248ENST00000558190 SKP2Q13309 424 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 ZNF468Q5VIY5 522 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-248ENST00000558190 ZNF813Q6ZN06 617 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 ZNF765Q7L2R6 523 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 EVA1AQ9H8M9 152 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 PRTFDC1Q9NRG1 225 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 RYDENQ9NUL5 291 aaKnown RBP3.39□□□□□ -1.87
ATXN3-248ENST00000558190 PDE7AQ13946 482 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 TSACCQ96A04 125 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-248ENST00000558190 ZNF707Q96C28 371 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-248ENST00000558190 TRMT61AQ96FX7 289 aaKnown RBP3.39□□□□□ -1.87
ATXN3-248ENST00000558190 SUSD3Q96L08 255 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 RARRES2Q99969 163 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 ZNF207O43670 478 aaKnown RBP3.39□□□□□ -1.87
ATXN3-248ENST00000558190 MMP15P51511 669 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 TAS2R46P59540 309 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 HSD11B2P80365 405 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 SRYQ05066 204 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 PGGHGQ32M88 737 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 OR6T1Q8NGN1 323 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 VN1R3Q9BXE9 311 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 SLC35D1Q9NTN3 355 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 PXDNLA1KZ92 1463 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 BLKP51451 505 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 FAM27D1Q5T7N8 215 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 LGALS14Q8TCE9 139 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 NANOS1Q8WY41 292 aaKnown RBP3.39□□□□□ -1.87
ATXN3-248ENST00000558190 HDAC8Q9BY41 377 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 GPR61Q9BZJ8 451 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 NMES1Q9C002 83 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 FKRPQ9H9S5 495 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 SLCO1C1Q9NYB5 712 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 OR5AP2Q8NGF4 316 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 ISOC2Q96AB3 205 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 GPATCH8Q9UKJ3 1502 aaKnown RBP3.39□□□□□ -1.87
ATXN3-248ENST00000558190 MELKQ14680 651 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 PKDCCQ504Y2 493 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 CTDSP1Q9GZU7 261 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 TREM2Q9NZC2 230 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 LPAR3Q9UBY5 353 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 ADAM11O75078 769 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 HPNP05981 417 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 CTSLP07711 333 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 RPS12P25398 132 aaKnown RBP3.39□□□□□ -1.87
ATXN3-248ENST00000558190 OVCA2Q8WZ82 227 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 GNPNAT1Q96EK6 184 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-248ENST00000558190 A0A087WUU8 490 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 PLSCR5A0PG75 271 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 SSX1Q16384 188 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 PSAPL1Q6NUJ1 521 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 OR1J2Q8NGS2 313 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 PTGES2Q9H7Z7 377 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 SLC23A2Q9UGH3 650 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 PTCH1Q13635 1447 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 A6NLC8 198 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 HNRNPA3P51991 378 aaKnown RBP3.39□□□□□ -1.87
ATXN3-248ENST00000558190 CASRP41180 1078 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 SLC6A11P48066 632 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 PAFAH1B2P68402 229 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 BTNL8Q6UX41 500 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 IL1F10Q8WWZ1 152 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 MARVELD3Q96A59 401 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 ZNF346Q9UL40 294 aaKnown RBP3.39□□□□□ -1.87
ATXN3-248ENST00000558190 COCHO43405 550 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 CA12O43570 354 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 RRADP55042 308 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 HSD11B1LQ7Z5J1 315 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 NPWQ8N729 165 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 OR11H4Q8NGC9 324 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 PPP1R1CQ8WVI7 109 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 LYSMD1Q96S90 227 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 DNASE2O00115 360 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-248ENST00000558190 ENSAO43768 121 aaKnown RBP3.39□□□□□ -1.87
ATXN3-248ENST00000558190 SLC37A1P57057 533 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 ABHD12BQ7Z5M8 362 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-248ENST00000558190 ZNF573Q86YE8 665 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 OR51F2Q8NH61 342 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 DCBLD2Q96PD2 775 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 OR10A5Q9H207 317 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 LOC102723971A0A1B0GUV8 181 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 C1orf226A1L170 272 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 ZP3P21754 424 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 NSDHLQ15738 373 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 MANEALQ5VSG8 457 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 LEMD1Q68G75 181 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms