RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 CNR1P21554 472 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 HTR1EP28566 365 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 GNA11P29992 359 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 CASP14P31944 242 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 YWHABP31946 246 aaKnown RBP2.12□□□□□ -2.07
SPG11-206ENST00000558093 ACTR1BP42025 376 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 KIR3DL2P43630 455 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 KCNJ3P48549 501 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 PPOXP50336 477 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 CCR8P51685 355 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 CDH4P55283 916 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 VSNL1P62760 191 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 CDK16Q00536 496 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 REEP5Q00765 189 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 DAZ2Q13117 558 aaKnown RBP2.12□□□□□ -2.07
SPG11-206ENST00000558093 EXOSC2Q13868 293 aaKnown RBP2.12□□□□□ -2.07
SPG11-206ENST00000558093 EBI3Q14213 229 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 ITIH4Q14624 930 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 PDK2Q15119 407 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 MRPL23Q16540 153 aaKnown RBP2.12□□□□□ -2.07
SPG11-206ENST00000558093 CDKN3Q16667 212 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 KLHL38Q2WGJ6 581 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 CCDC153Q494R4 210 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 GPR107Q5VW38 600 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 LIPNQ5VXI9 398 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 PVRIGQ6DKI7 326 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 TMEM225Q6GV28 225 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 OR2A2Q6IF42 318 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 SPOPLQ6IQ16 392 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 TMEM107Q6UX40 140 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 FAM151BQ6UXP7 276 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 ASCL4Q6XD76 172 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 UTS2BQ765I0 119 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 SSX9Q7RTT3 188 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 ABHD12BQ7Z5M8 362 aaPredicted RBP2.12□□□□□ -2.07
SPG11-206ENST00000558093 SLC51BQ86UW2 128 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 BOD1L2Q8IYS8 172 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 ZNF683Q8IZ20 524 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 SLC38A6Q8IZM9 456 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 GABRG1Q8N1C3 465 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 LIX1Q8N485 282 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 C17orf78Q8N4C9 275 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 ARIH2OSQ8N7S6 290 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 FBXO36Q8NEA4 188 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 C19orf18Q8NEA5 215 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 OR5D18Q8NGL1 313 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 OR1L4Q8NGR5 311 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 M1APQ8TC57 530 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 MARCH1Q8TCQ1 289 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 RAET1EQ8TD07 263 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 C7orf33Q8WU49 177 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 PIGCQ92535 297 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 ESR2Q92731 530 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 CCDC124Q96CT7 223 aaKnown RBP2.12□□□□□ -2.07
SPG11-206ENST00000558093 COQ2Q96H96 371 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 CPB2Q96IY4 423 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 SLC35E1Q96K37 410 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 TSSK3Q96PN8 268 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 VPS35Q96QK1 796 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 CYP2S1Q96SQ9 504 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 CGREF1Q99674 301 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 NRTNQ99748 197 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 CTRCQ99895 268 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 OMDQ99983 421 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 TMEM121Q9BTD3 319 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 GSDMCQ9BYG8 508 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 METTL8Q9H825 291 aaKnown RBP2.12□□□□□ -2.07
SPG11-206ENST00000558093 SLC38A10Q9HBR0 1119 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 MRPS30Q9NP92 439 aaKnown RBP2.12□□□□□ -2.07
SPG11-206ENST00000558093 DYRK4Q9NR20 520 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 POLE4Q9NR33 117 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 DAZ3Q9NR90 486 aaKnown RBP2.12□□□□□ -2.07
SPG11-206ENST00000558093 TREX1Q9NSU2 369 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 IMP3Q9NV31 184 aaKnown RBP2.12□□□□□ -2.07
SPG11-206ENST00000558093 ZNF639Q9UID6 485 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 ZNF223Q9UK11 482 aaPredicted RBP2.12□□□□□ -2.07
SPG11-206ENST00000558093 CSDC2Q9Y534 153 aaKnown RBP2.12□□□□□ -2.07
SPG11-206ENST00000558093 NPTNQ9Y639 398 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 ARHGAP21Q5T5U3 1957 aa2.12□□□□□ -2.07
SPG11-206ENST00000558093 MN1Q10571 1320 aaPredicted RBP2.12□□□□□ -2.07
SPG11-206ENST00000558093 ROCK2O75116 1388 aaKnown RBP2.11□□□□□ -2.07
SPG11-206ENST00000558093 SMCO3A2RU48 225 aa2.11□□□□□ -2.07
SPG11-206ENST00000558093 PRSS37A4D1T9 235 aa2.11□□□□□ -2.07
SPG11-206ENST00000558093 MGAT4DA6NG13 374 aa2.11□□□□□ -2.07
SPG11-206ENST00000558093 LRRC30A6NM36 301 aa2.11□□□□□ -2.07
SPG11-206ENST00000558093 A8MUA0 341 aa2.11□□□□□ -2.07
SPG11-206ENST00000558093 ERVV-1B6SEH8 477 aa2.11□□□□□ -2.07
SPG11-206ENST00000558093 LRRN3E7EW58 273 aa2.11□□□□□ -2.07
SPG11-206ENST00000558093 KLRC4-KLRK1H3BQV0 150 aa2.11□□□□□ -2.07
SPG11-206ENST00000558093 LIN7AO14910 233 aaPredicted RBP2.11□□□□□ -2.07
SPG11-206ENST00000558093 SIVA1O15304 175 aa2.11□□□□□ -2.07
SPG11-206ENST00000558093 TOX3O15405 576 aaPredicted RBP2.11□□□□□ -2.07
SPG11-206ENST00000558093 NBR2O15453 112 aa2.11□□□□□ -2.07
SPG11-206ENST00000558093 RS1O15537 224 aa2.11□□□□□ -2.07
SPG11-206ENST00000558093 ZSCAN12O43309 604 aa2.11□□□□□ -2.07
SPG11-206ENST00000558093 SNAI2O43623 268 aa2.11□□□□□ -2.07
SPG11-206ENST00000558093 OR2F2O95006 317 aa2.11□□□□□ -2.07
SPG11-206ENST00000558093 SCELO95171 688 aa2.11□□□□□ -2.07
SPG11-206ENST00000558093 LYPLA2O95372 231 aa2.11□□□□□ -2.07
SPG11-206ENST00000558093 SERPIND1P05546 499 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms