RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 SELENOFO60613 162 aa14.89□□□□□ -0.03
SNX1-203ENST00000558040 IGHA1P01876 353 aa14.89□□□□□ -0.03
SNX1-203ENST00000558040 HTR1AP08908 422 aa14.89□□□□□ -0.03
SNX1-203ENST00000558040 OR2T7P0C7T2 308 aa14.89□□□□□ -0.03
SNX1-203ENST00000558040 SMIM18P0DKX4 95 aa14.89□□□□□ -0.03
SNX1-203ENST00000558040 GAAP10253 952 aa14.89□□□□□ -0.03
SNX1-203ENST00000558040 ATP6V1B1P15313 513 aa14.89□□□□□ -0.03
SNX1-203ENST00000558040 C21orf33P30042 268 aaPredicted RBP14.89□□□□□ -0.03
SNX1-203ENST00000558040 ENTPD1P49961 510 aa14.89□□□□□ -0.03
SNX1-203ENST00000558040 ADAM8P78325 824 aa14.89□□□□□ -0.03
SNX1-203ENST00000558040 ROR2Q01974 943 aaKnown RBP14.89□□□□□ -0.03
SNX1-203ENST00000558040 PIGFQ07326 219 aa14.89□□□□□ -0.03
SNX1-203ENST00000558040 RNLSQ5VYX0 342 aa14.89□□□□□ -0.03
SNX1-203ENST00000558040 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.89□□□□□ -0.03
SNX1-203ENST00000558040 SLC35F2Q8IXU6 374 aa14.89□□□□□ -0.03
SNX1-203ENST00000558040 TIGD4Q8IY51 512 aa14.89□□□□□ -0.03
SNX1-203ENST00000558040 SPARTQ8N0X7 666 aa14.89□□□□□ -0.03
SNX1-203ENST00000558040 OR10H4Q8NGA5 316 aa14.89□□□□□ -0.03
SNX1-203ENST00000558040 OR6N2Q8NGY6 317 aa14.89□□□□□ -0.03
SNX1-203ENST00000558040 OR2T27Q8NH04 317 aa14.89□□□□□ -0.03
SNX1-203ENST00000558040 MRPL48Q96GC5 212 aaKnown RBP14.89□□□□□ -0.03
SNX1-203ENST00000558040 FOXN4Q96NZ1 517 aa14.89□□□□□ -0.03
SNX1-203ENST00000558040 SEC61A2Q9H9S3 476 aa14.89□□□□□ -0.03
SNX1-203ENST00000558040 GPR35Q9HC97 309 aa14.89□□□□□ -0.03
SNX1-203ENST00000558040 SLC7A10Q9NS82 523 aa14.89□□□□□ -0.03
SNX1-203ENST00000558040 KCNG2Q9UJ96 466 aa14.89□□□□□ -0.03
SNX1-203ENST00000558040 ERGIC3Q9Y282 383 aa14.89□□□□□ -0.03
SNX1-203ENST00000558040 TMEM14AQ9Y6G1 99 aa14.89□□□□□ -0.03
SNX1-203ENST00000558040 DAPL1A0PJW8 107 aa14.88□□□□□ -0.03
SNX1-203ENST00000558040 TRIM64CA6NLI5 447 aa14.88□□□□□ -0.03
SNX1-203ENST00000558040 C12orf71A8MTZ7 269 aa14.88□□□□□ -0.03
SNX1-203ENST00000558040 RPL36A-HNRNPH2H7BZ11 118 aa14.88□□□□□ -0.03
SNX1-203ENST00000558040 J3QRE1 110 aa14.88□□□□□ -0.03
SNX1-203ENST00000558040 TMCC2O75069 709 aa14.88□□□□□ -0.03
SNX1-203ENST00000558040 CNOT4O95628 575 aaKnown RBP14.88□□□□□ -0.03
SNX1-203ENST00000558040 GPANK1O95872 356 aa14.88□□□□□ -0.03
SNX1-203ENST00000558040 CLPTM1O96005 669 aa14.88□□□□□ -0.03
SNX1-203ENST00000558040 GLI4P10075 376 aa14.88□□□□□ -0.03
SNX1-203ENST00000558040 NPR2P20594 1047 aa14.88□□□□□ -0.03
SNX1-203ENST00000558040 CEACAM8P31997 349 aaPredicted RBP14.88□□□□□ -0.03
SNX1-203ENST00000558040 KIR2DL2P43627 348 aaPredicted RBP14.88□□□□□ -0.03
SNX1-203ENST00000558040 MVKQ03426 396 aa14.88□□□□□ -0.03
SNX1-203ENST00000558040 CEACAM16Q2WEN9 425 aa14.88□□□□□ -0.03
SNX1-203ENST00000558040 FBXW9Q5XUX1 488 aa14.88□□□□□ -0.03
SNX1-203ENST00000558040 TMEM211Q6ICI0 200 aa14.88□□□□□ -0.03
SNX1-203ENST00000558040 TMEM154Q6P9G4 183 aa14.88□□□□□ -0.03
SNX1-203ENST00000558040 LYPD4Q6UWN0 246 aa14.88□□□□□ -0.03
SNX1-203ENST00000558040 C3P1Q6ZMU1 363 aa14.88□□□□□ -0.03
SNX1-203ENST00000558040 FOXL2NBQ6ZUU3 175 aa14.88□□□□□ -0.03
SNX1-203ENST00000558040 SFXN3Q9BWM7 321 aa14.88□□□□□ -0.03
SNX1-203ENST00000558040 NELFAQ9H3P2 528 aa14.88□□□□□ -0.03
SNX1-203ENST00000558040 WDR76Q9H967 626 aa14.88□□□□□ -0.03
SNX1-203ENST00000558040 MRPL22Q9NWU5 206 aaKnown RBP14.88□□□□□ -0.03
SNX1-203ENST00000558040 MALT1Q9UDY8 824 aa14.88□□□□□ -0.03
SNX1-203ENST00000558040 PROCRQ9UNN8 238 aa14.88□□□□□ -0.03
SNX1-203ENST00000558040 UGT2A1Q9Y4X1 527 aa14.88□□□□□ -0.03
SNX1-203ENST00000558040 SVILO95425 2214 aa14.88□□□□□ -0.03
SNX1-203ENST00000558040 HSPB2A8KAH6 182 aa14.87□□□□□ -0.03
SNX1-203ENST00000558040 E9PLN8 166 aa14.87□□□□□ -0.03
SNX1-203ENST00000558040 ZNF670-ZNF695F2Z2N8 137 aa14.87□□□□□ -0.03
SNX1-203ENST00000558040 ZNF593O00488 134 aaPredicted RBP14.87□□□□□ -0.03
SNX1-203ENST00000558040 PHYHO14832 338 aa14.87□□□□□ -0.03
SNX1-203ENST00000558040 MYL12BO14950 172 aa14.87□□□□□ -0.03
SNX1-203ENST00000558040 IGHV3-9P01782 118 aa14.87□□□□□ -0.03
SNX1-203ENST00000558040 TFP02787 698 aa14.87□□□□□ -0.03
SNX1-203ENST00000558040 MSR1P21757 451 aa14.87□□□□□ -0.03
SNX1-203ENST00000558040 CTSSP25774 331 aa14.87□□□□□ -0.03
SNX1-203ENST00000558040 MRPS34P82930 218 aaKnown RBP14.87□□□□□ -0.03
SNX1-203ENST00000558040 TBCEQ15813 527 aaPredicted RBP14.87□□□□□ -0.03
SNX1-203ENST00000558040 HSPB2Q16082 182 aa14.87□□□□□ -0.03
SNX1-203ENST00000558040 KCNMB1Q16558 191 aa14.87□□□□□ -0.03
SNX1-203ENST00000558040 TEX30Q5JUR7 227 aa14.87□□□□□ -0.03
SNX1-203ENST00000558040 TFAP2EQ6VUC0 442 aa14.87□□□□□ -0.03
SNX1-203ENST00000558040 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.87□□□□□ -0.03
SNX1-203ENST00000558040 CDC20BQ86Y33 519 aa14.87□□□□□ -0.03
SNX1-203ENST00000558040 RPRMLQ8N4K4 120 aa14.87□□□□□ -0.03
SNX1-203ENST00000558040 ZNF454Q8N9F8 522 aa14.87□□□□□ -0.03
SNX1-203ENST00000558040 C11orf40Q8WZ69 217 aa14.87□□□□□ -0.03
SNX1-203ENST00000558040 FCGR1BQ92637 280 aa14.87□□□□□ -0.03
SNX1-203ENST00000558040 FOXB1Q99853 325 aa14.87□□□□□ -0.03
SNX1-203ENST00000558040 VKORC1Q9BQB6 163 aa14.87□□□□□ -0.03
SNX1-203ENST00000558040 MND1Q9BWT6 205 aa14.87□□□□□ -0.03
SNX1-203ENST00000558040 CDADC1Q9BWV3 514 aa14.87□□□□□ -0.03
SNX1-203ENST00000558040 POLE4Q9NR33 117 aa14.87□□□□□ -0.03
SNX1-203ENST00000558040 ERVK13-1Q9NX77 482 aa14.87□□□□□ -0.03
SNX1-203ENST00000558040 SH3BGRL2Q9UJC5 107 aa14.87□□□□□ -0.03
SNX1-203ENST00000558040 LAMP5Q9UJQ1 280 aa14.87□□□□□ -0.03
SNX1-203ENST00000558040 POLR1DQ9Y2S0 133 aa14.87□□□□□ -0.03
SNX1-203ENST00000558040 PIEZO2Q9H5I5 2752 aa14.87□□□□□ -0.03
SNX1-203ENST00000558040 ALPK2Q86TB3 2170 aa14.86□□□□□ -0.03
SNX1-203ENST00000558040 TRGV8A0A0C4DH27 118 aa14.86□□□□□ -0.03
SNX1-203ENST00000558040 ZNF99A8MXY4 864 aaPredicted RBP14.86□□□□□ -0.03
SNX1-203ENST00000558040 TNFSF13O75888 250 aa14.86□□□□□ -0.03
SNX1-203ENST00000558040 TOXO94900 526 aa14.86□□□□□ -0.03
SNX1-203ENST00000558040 MPZL1O95297 269 aa14.86□□□□□ -0.03
SNX1-203ENST00000558040 SPARCP09486 303 aa14.86□□□□□ -0.03
SNX1-203ENST00000558040 EDNRAP25101 427 aa14.86□□□□□ -0.03
SNX1-203ENST00000558040 CDAP32320 146 aa14.86□□□□□ -0.03
SNX1-203ENST00000558040 CA7P43166 264 aa14.86□□□□□ -0.03
SNX1-203ENST00000558040 SH3BGRP55822 239 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms