RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 A0A0X1KG70 313 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 CLDN25C9JDP6 229 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 J3QLI3 93 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 MT-ND1P03886 318 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 TSPAN19P0C672 248 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 EGR1P18146 543 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 DRD4P21917 467 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 STOMP27105 288 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 PCGF2P35227 344 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 APLNRP35414 380 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 AQP2P41181 271 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 WNT5AP41221 380 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 ZNF81P51508 661 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 MMP15P51511 669 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 MRPS34P82930 218 aaKnown RBP13.55□□□□□ -0.24
SCFD1-224ENST00000557713 HSF2Q03933 536 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 GLO1Q04760 184 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 HFEQ30201 348 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 TMEM255AQ5JRV8 349 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 ARMC4Q5T2S8 1044 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 NKAIN4Q8IVV8 208 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 C3orf56Q8N813 242 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 ICA1LQ8NDH6 482 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 OR4M2Q8NGB6 313 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 SLC26A7Q8TE54 656 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 TSPEARQ8WU66 669 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 STON2Q8WXE9 905 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 RAB1CQ92928 201 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 NABP1Q96AH0 204 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 NMD3Q96D46 503 aaKnown RBP13.55□□□□□ -0.24
SCFD1-224ENST00000557713 MARS2Q96GW9 593 aaKnown RBP13.55□□□□□ -0.24
SCFD1-224ENST00000557713 POM121L2Q96KW2 1035 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 JMJD8Q96S16 334 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 RBM4Q9BWF3 364 aaKnown RBP13.55□□□□□ -0.24
SCFD1-224ENST00000557713 NANOGQ9H9S0 305 aa13.55□□□□□ -0.24
SCFD1-224ENST00000557713 LOC100509620A0A075B734 347 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 MCIDASD6RGH6 385 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 ANGPT2O15123 496 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 TPD52L2O43399 206 aaKnown RBP13.54□□□□□ -0.24
SCFD1-224ENST00000557713 OR7A10O76100 309 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 SLC2A10O95528 541 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 IGF2P01344 180 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 IGHV1-46P01743 117 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 MT-ND5P03915 603 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 ZNF32P17041 273 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 MAKP20794 623 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 CDAP32320 146 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 DAP3P51398 398 aaKnown RBP13.54□□□□□ -0.24
SCFD1-224ENST00000557713 VMACQ2NL98 169 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 ZNF718Q3SXZ3 478 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 FAM209AQ5JX71 171 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 THEM4Q5T1C6 240 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 INTS11Q5TA45 600 aaKnown RBP13.54□□□□□ -0.24
SCFD1-224ENST00000557713 ZNF101Q8IZC7 436 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 OR10A6Q8NH74 314 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 MOSPD2Q8NHP6 518 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 PFN4Q8NHR9 129 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 RASSF5Q8WWW0 418 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 LIPHQ8WWY8 451 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 ZMYND19Q96E35 227 aaPredicted RBP13.54□□□□□ -0.24
SCFD1-224ENST00000557713 ELMOD3Q96FG2 381 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 SUCNR1Q9BXA5 334 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 KCNN2Q9H2S1 579 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 SAP30LQ9HAJ7 183 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 SMURF2Q9HAU4 748 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 INIPQ9NRY2 104 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 C20orf141Q9NUB4 165 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 DYSFO75923 2080 aa13.54□□□□□ -0.24
SCFD1-224ENST00000557713 IGKV1D-43A0A0B4J1Z2 117 aa13.53□□□□□ -0.24
SCFD1-224ENST00000557713 WIPF1O43516 503 aa13.53□□□□□ -0.24
SCFD1-224ENST00000557713 UBOX5O94941 541 aa13.53□□□□□ -0.24
SCFD1-224ENST00000557713 ADRA2CP18825 462 aa13.53□□□□□ -0.24
SCFD1-224ENST00000557713 CCNOP22674 350 aa13.53□□□□□ -0.24
SCFD1-224ENST00000557713 MPV17P39210 176 aa13.53□□□□□ -0.24
SCFD1-224ENST00000557713 RBM34P42696 430 aaKnown RBP13.53□□□□□ -0.24
SCFD1-224ENST00000557713 LIMS1P48059 325 aa13.53□□□□□ -0.24
SCFD1-224ENST00000557713 PSG4Q00888 419 aa13.53□□□□□ -0.24
SCFD1-224ENST00000557713 NFYCQ13952 458 aa13.53□□□□□ -0.24
SCFD1-224ENST00000557713 FAM27BQ5VT28 67 aa13.53□□□□□ -0.24
SCFD1-224ENST00000557713 DCAF12L2Q5VW00 463 aa13.53□□□□□ -0.24
SCFD1-224ENST00000557713 MBNL2Q5VZF2 373 aaKnown RBP13.53□□□□□ -0.24
SCFD1-224ENST00000557713 HDDC2Q7Z4H3 204 aa13.53□□□□□ -0.24
SCFD1-224ENST00000557713 SGMS2Q8NHU3 365 aa13.53□□□□□ -0.24
SCFD1-224ENST00000557713 NANPQ8TBE9 248 aa13.53□□□□□ -0.24
SCFD1-224ENST00000557713 TMEM255BQ8WV15 326 aa13.53□□□□□ -0.24
SCFD1-224ENST00000557713 CCL17Q92583 94 aa13.53□□□□□ -0.24
SCFD1-224ENST00000557713 HDAC2Q92769 488 aaKnown RBP13.53□□□□□ -0.24
SCFD1-224ENST00000557713 SGTBQ96EQ0 304 aa13.53□□□□□ -0.24
SCFD1-224ENST00000557713 TIMD4Q96H15 378 aa13.53□□□□□ -0.24
SCFD1-224ENST00000557713 SLC6A7Q99884 636 aa13.53□□□□□ -0.24
SCFD1-224ENST00000557713 CCNB1IP1Q9NPC3 277 aa13.53□□□□□ -0.24
SCFD1-224ENST00000557713 OPN4Q9UHM6 478 aa13.53□□□□□ -0.24
SCFD1-224ENST00000557713 KLHL21Q9UJP4 597 aa13.53□□□□□ -0.24
SCFD1-224ENST00000557713 SH3GLB1Q9Y371 365 aa13.53□□□□□ -0.24
SCFD1-224ENST00000557713 C5orf49A4QMS7 147 aa13.52□□□□□ -0.25
SCFD1-224ENST00000557713 NPIPB13A6NJU9 1138 aa13.52□□□□□ -0.25
SCFD1-224ENST00000557713 NPIPB4C9JG80 1138 aa13.52□□□□□ -0.25
SCFD1-224ENST00000557713 SPRY3O43610 288 aa13.52□□□□□ -0.25
SCFD1-224ENST00000557713 FSHBP01225 129 aa13.52□□□□□ -0.25
SCFD1-224ENST00000557713 ADH4P08319 380 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms